Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001720-TA|BGIBMGA001720-PA|IPR007087|Zinc finger,
C2H2-type, IPR000637|HMG-I and HMG-Y, DNA-binding
(429 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 97 3e-21
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 48 3e-06
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 48 3e-06
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 47 4e-06
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 44 4e-05
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 40 9e-04
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 38 0.004
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 37 0.006
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 35 0.019
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 35 0.025
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 34 0.033
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 34 0.044
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 32 0.18
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 30 0.54
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 30 0.54
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 30 0.72
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 29 0.95
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 29 1.3
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 29 1.3
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 29 1.7
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 28 2.9
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 28 2.9
SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit... 27 3.8
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po... 27 3.8
SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces pom... 27 5.1
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 27 5.1
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 27 5.1
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 27 5.1
SPBC660.13c |ssb1|rpa1, rad11|DNA replication factor A subunit S... 27 5.1
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 27 6.7
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 27 6.7
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.8
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 26 8.8
SPBC25B2.10 |||Usp |Schizosaccharomyces pombe|chr 2|||Manual 26 8.8
SPCC1259.03 |rpa12||DNA-directed RNA polymerase complex I subuni... 26 8.8
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 8.8
SPBC2F12.11c |rep2||transcriptional activator Rep2|Schizosacchar... 26 8.8
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 97.5 bits (232), Expect = 3e-21
Identities = 80/321 (24%), Positives = 134/321 (41%), Gaps = 26/321 (8%)
Query: 82 KCNKEFKNYQNLYLHTTRVHSTEEAAVLCDI--CDKTFKNKHYLYMHKINKHYSEIEKCY 139
+C K++ L H R HS E V CD C K F K +L +HK + C+
Sbjct: 29 ECGKKYSRPSLLEQHL-RTHSNERPFV-CDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCH 86
Query: 140 CQFCLHEFKTRKALQMHVKKIHPNTLPELKCVE-CGKEFQVPYKLRYHMESCITSNREKF 198
C +F T++ L+ H++ +H P E C + F +LR H+ +C T + +
Sbjct: 87 YDGCDAQFYTQQHLERHIE-VHRKPKPYACTWEGCDECFSKHQQLRSHISACHT-HLLPY 144
Query: 199 IC--QLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMT----FKSRHHMKRHVLNIHPP 252
C Q C+ F L+ H+ H + + C F+ ++ H+ H P
Sbjct: 145 PCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAHVP 204
Query: 253 LESKVNCPECQKEFKNDQYLREHMQVHSSADSKVK---CEL--CDKYFHSAIRLKKHKKI 307
+C C ++FK +LR H+ +H + + K C + C K F + LKKH +
Sbjct: 205 -----SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISV 259
Query: 308 VHPTKPKLRCEKCDKEFAHPHYLTRHKNAVHMEIDESNYEHECEXXXXXXXXXXYLSNHL 367
+H C+ C +F + H L RH + Y +EC ++ H
Sbjct: 260 IHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYINECGIKHDGIEG---VAIHD 316
Query: 368 QRHEQQQMKRISRMVKTVIGE 388
Q+ ++ +S + K +I E
Sbjct: 317 QKEKELSSNLVSDVAKKIINE 337
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 47.6 bits (108), Expect = 3e-06
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 259 CPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLRC 317
CPEC K+FK ++LR H++ +++ C +C K F L++H+++ P+L C
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPRLAC 482
Score = 42.7 bits (96), Expect = 1e-04
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 170 CVECGKEFQVPYKLRYHMESCITSNREKFICQLCQKPFKNHLNLKRHMQTQHTPVERHPC 229
C EC K+F+ LR H+ S TS + F+C +C K F NL++H + R C
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEK-PFVC-ICGKRFSRRDNLRQHERLHVNASPRLAC 482
Query: 230 VFCPMTFKS 238
F P + S
Sbjct: 483 FFQPSGYYS 491
Score = 41.1 bits (92), Expect = 3e-04
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 196 EKFICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLES 255
+ F+C C K FK +L+RH+++ HT + C+ C F R ++++H +H
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHE-RLHVNASP 478
Query: 256 KVNC 259
++ C
Sbjct: 479 RLAC 482
Score = 40.3 bits (90), Expect = 5e-04
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 76 KRYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEI 135
K ++C +C+K+FK ++L H +H++E+ V C IC K F + L H+ H +
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFV-C-ICGKRFSRRDNLRQHE-RLHVNAS 477
Query: 136 EKCYCQF 142
+ C F
Sbjct: 478 PRLACFF 484
Score = 33.5 bits (73), Expect = 0.058
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 140 CQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYH 186
C C +FK + L+ H++ +H + P C+ CGK F LR H
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKP-FVCI-CGKRFSRRDNLRQH 469
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 47.6 bits (108), Expect = 3e-06
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 173 CGKEFQVPYKLRYHMESCITSNREKFICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFC 232
C K F Y L+ HM + +N F C +C+K F + +RH Q HT ++ CV C
Sbjct: 577 CNKRFTRAYNLKSHMNT--HTNYRPFQCSICKKSFARQHDKRRHEQL-HTGIKAFACVTC 633
Query: 233 PMTFKSRHHMKRH 245
F + RH
Sbjct: 634 NQRFARMDALNRH 646
Score = 40.3 bits (90), Expect = 5e-04
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 73 KSEKRYICH--KCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINK 130
KS+ Y+C CNK F NL H H T C IC K+F +H H+ +
Sbjct: 565 KSQGNYVCTFAGCNKRFTRAYNLKSHMN-TH-TNYRPFQCSICKKSFARQHDKRRHE--Q 620
Query: 131 HYSEIEKCYCQFCLHEFKTRKALQMHVK 158
++ I+ C C F AL H K
Sbjct: 621 LHTGIKAFACVTCNQRFARMDALNRHYK 648
Score = 39.5 bits (88), Expect = 9e-04
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 262 CQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLRCEKCD 321
C K F L+ HM H++ +C +C K F ++H+++ H C C+
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNY-RPFQCSICKKSFARQHDKRRHEQL-HTGIKAFACVTCN 634
Query: 322 KEFAHPHYLTRH 333
+ FA L RH
Sbjct: 635 QRFARMDALNRH 646
Score = 34.7 bits (76), Expect = 0.025
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 229 CVF--CPMTFKSRHHMKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQVHSSADSKV 286
C F C F +++K H +N H C C+K F R H Q+H+ +
Sbjct: 572 CTFAGCNKRFTRAYNLKSH-MNTHTNYRP-FQCSICKKSFARQHDKRRHEQLHTGIKA-F 628
Query: 287 KCELCDKYFHSAIRLKKHKK 306
C C++ F L +H K
Sbjct: 629 ACVTCNQRFARMDALNRHYK 648
Score = 32.7 bits (71), Expect = 0.10
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 291 CDKYFHSAIRLKKHKKIVHPTKPKLRCEKCDKEFAHPHYLTRHK 334
C+K F A LK H H +C C K FA H RH+
Sbjct: 577 CNKRFTRAYNLKSHMN-THTNYRPFQCSICKKSFARQHDKRRHE 619
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 47.2 bits (107), Expect = 4e-06
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 188 ESCITSNREKFICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVL 247
E + ++ F C C K F H NL RH + H+ E PC +C + K + +KRH+
Sbjct: 21 EPSLIDSKRVFPCDQCAKRFTRHENLTRH-KACHSKAEPIPCPYCEIKCKRKDLLKRHIQ 79
Query: 248 NIH 250
H
Sbjct: 80 RFH 82
Score = 32.7 bits (71), Expect = 0.10
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 110 CDICDKTFKNKHYLYMHKINKHYSEIEKCYCQFCLHEFKTRKALQMHVKKIH 161
CD C K F L HK +S+ E C +C + K + L+ H+++ H
Sbjct: 33 CDQCAKRFTRHENLTRHKAC--HSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
Score = 31.9 bits (69), Expect = 0.18
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 259 CPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTK 312
C +C K F + L H HS A+ + C C+ LK+H + H K
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAE-PIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
Score = 31.5 bits (68), Expect = 0.24
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 61 SVLSTWKPIMFPK---SEKRYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTF 117
+VLS + + P S++ + C +C K F ++NL H HS E + C C+
Sbjct: 11 NVLSAKRKLTEPSLIDSKRVFPCDQCAKRFTRHENLTRHKA-CHSKAE-PIPCPYCEIKC 68
Query: 118 KNKHYLYMH 126
K K L H
Sbjct: 69 KRKDLLKRH 77
Score = 29.5 bits (63), Expect = 0.95
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 228 PCVFCPMTFKSRHHMKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQ 277
PC C F ++ RH H E + CP C+ + K L+ H+Q
Sbjct: 32 PCDQCAKRFTRHENLTRHKA-CHSKAEP-IPCPYCEIKCKRKDLLKRHIQ 79
Score = 26.2 bits (55), Expect = 8.8
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 301 LKKHKKIVHPT----KPKLRCEKCDKEFAHPHYLTRHKNAVHMEID 342
L +K+ P+ K C++C K F LTRHK A H + +
Sbjct: 13 LSAKRKLTEPSLIDSKRVFPCDQCAKRFTRHENLTRHK-ACHSKAE 57
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 44.0 bits (99), Expect = 4e-05
Identities = 31/145 (21%), Positives = 61/145 (42%), Gaps = 3/145 (2%)
Query: 117 FKNKHYLYMHKINKHYSEIEKCYCQFCLHEFKTRKALQMHVKKIH-PNTLPELKCVECGK 175
F+ K + ++K Y+E +C + CL + + HV +H P + +KC+
Sbjct: 982 FEEKVLKAFNMLSKGYAEY-RCQWEGCLANLHSLENFIKHVLLLHHPKSCSVVKCLWASC 1040
Query: 176 EFQVPYK-LRYHMESCITSNREKFICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPM 234
+ +P + H+ + + R C+K F N+ ++ +H+Q H P + P F +
Sbjct: 1041 DMVLPSEEFEMHLRGHLNNIRLNCEVSNCKKCFSNYEDMFKHLQHSHLPFKFTPESFIKI 1100
Query: 235 TFKSRHHMKRHVLNIHPPLESKVNC 259
+ R N + +V C
Sbjct: 1101 RNGNVKEEARRTRNAYTQKSGEVEC 1125
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 39.5 bits (88), Expect = 9e-04
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 252 PLESKVNCPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVH-P 310
P S Q++ + ++ ++ V + ++V E+C+ F L +H+ +H
Sbjct: 546 PTNSSTTATGAQRKRRKFKFGKQIGPVRCTLQNRVTGEICNTVFSRTYDLIRHQDTIHAK 605
Query: 311 TKPKLRCEKC--DKEFAHPHYLTRHKNAVH 338
T+P RCE C + F+ L RH H
Sbjct: 606 TRPVFRCEICGDQRHFSRHDALVRHLRVKH 635
Score = 33.9 bits (74), Expect = 0.044
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 173 CGKEFQVPYKLRYHMESCITSNREKFICQLC--QKPFKNHLNLKRHMQTQH 221
C F Y L H ++ R F C++C Q+ F H L RH++ +H
Sbjct: 585 CNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRHLRVKH 635
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 83 CNKEFKNYQNLYLHTTRVHSTEEAAVLCDIC--DKTFKNKHYLYMHKINKH 131
CN F +L H +H+ C+IC + F L H KH
Sbjct: 585 CNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRHLRVKH 635
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 37.5 bits (83), Expect = 0.004
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 260 PECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKL 315
P+C K F ++LR H + H + + C C++ F + L +H + +H K L
Sbjct: 31 PDCPKSFTRKEHLRRHERTHENVKA-FSCSFCNRAFARSDVLNRHVQQMHLQKQNL 85
Score = 37.1 bits (82), Expect = 0.005
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 264 KEFKNDQYLREHMQVHSSADSKVKCEL--CDKYFHSAIRLKKHKKIVHPTKPKLRCEKCD 321
+E ++ L++ + H D + C C K F L++H++ H C C+
Sbjct: 4 EESFTEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHER-THENVKAFSCSFCN 62
Query: 322 KEFAHPHYLTRHKNAVHME 340
+ FA L RH +H++
Sbjct: 63 RAFARSDVLNRHVQQMHLQ 81
Score = 35.5 bits (78), Expect = 0.014
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 197 KFICQL--CQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIH 250
+F C C K F +L+RH +T H V+ C FC F + RHV +H
Sbjct: 25 RFYCTYPDCPKSFTRKEHLRRHERT-HENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
Score = 33.9 bits (74), Expect = 0.044
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 98 TRVHSTEEAAVLCDI--CDKTFKNKHYLYMHKINKHYSEIEKCYCQFCLHEFKTRKALQM 155
+R H + C C K+F K +L H+ + + ++ C FC F L
Sbjct: 16 SRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHE--RTHENVKAFSCSFCNRAFARSDVLNR 73
Query: 156 HVKKIH 161
HV+++H
Sbjct: 74 HVQQMH 79
Score = 30.3 bits (65), Expect = 0.54
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Query: 166 PELKCV--ECGKEFQVPYKLRYHMESCITSNREKFICQLCQKPFKNHLNLKRHMQTQH 221
P C +C K F LR H + N + F C C + F L RH+Q H
Sbjct: 24 PRFYCTYPDCPKSFTRKEHLRRHERT--HENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 36.7 bits (81), Expect = 0.006
Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 101 HSTEEAAVL----C--DICDKTFKNKHYLYMHKINKHYSEIEKCYCQFCL---------H 145
H+ EE+ +L C D CD T K L +H KH+ K +C C+ H
Sbjct: 160 HAQEESNLLLQFNCPEDACDITCKGWFDLKLHAKVKHH----KFFCDLCVKNKKVFTHEH 215
Query: 146 EFKTRKALQMHVKKIHPNTLPEL-------KCVECGKEFQVPYKLRYHMESCITSNREKF 198
++K L H + + E+ KC C F +L H C + +
Sbjct: 216 TLFSKKGLTKHNEVGDQGSDLEITGFKGHPKCEFCNTHFYDDDELFKH---CREKHERCY 272
Query: 199 IC-QLCQKP----FKNHLNLKRHMQTQHTPVERHPCVFCP-MTFKSRHHMKRHVLNIHP 251
IC Q+ +P FKN+ +L+RH + H C+ + F + +K H L+ HP
Sbjct: 273 ICDQVAGRPTHQYFKNYDSLERHFEKDHYICRERECLERKFVVFGTEIDLKAHQLDEHP 331
Score = 31.5 bits (68), Expect = 0.24
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 287 KCELCDKYFHSAIRLKKHKKIVHPTKPKLRCEKCDKEFAHP-HYLTRHKNAVHMEIDESN 345
KCE C+ +F+ L KH + H RC CD+ P H ++ +++ ++ +
Sbjct: 246 KCEFCNTHFYDDDELFKHCREKHE-----RCYICDQVAGRPTHQYFKNYDSLERHFEKDH 300
Query: 346 Y---EHEC 350
Y E EC
Sbjct: 301 YICREREC 308
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 35.1 bits (77), Expect = 0.019
Identities = 15/59 (25%), Positives = 23/59 (38%)
Query: 227 HPCVFCPMTFKSRHHMKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQVHSSADSK 285
+ C C F H RH+ P C K F L H ++H++A+S+
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSR 84
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 250 HPPLESKVNCPECQKEFKNDQYLREHMQVHSSADSKVKCEL--CDKYFHSAIRLKKHKKI 307
+P CP C K F ++ H++ H+ V C C K F + L +H +I
Sbjct: 19 NPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHV-CTFPGCAKRFSRSDELTRHARI 77
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 34.7 bits (76), Expect = 0.025
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 224 VERHPCVFCPMTFKSRHHMKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQVH 279
++ + C FC F + H RH+ + + + P C+K F L H++ H
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 34.3 bits (75), Expect = 0.033
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 17/113 (15%)
Query: 145 HEFKTRKALQMHVKKIHPNTLPELKCVE------------CGKEFQVPYKLRYHMESCIT 192
H KTRK + +I P T+ L C C K Y + H+++ ++
Sbjct: 411 HRCKTRKQ-STRICRIPPETMASLYCGPEADGKYVCLYNGCNKRIARKYNVESHIQTHLS 469
Query: 193 SNREKFICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRH 245
+ C LC+ F H +LKRH++ H + C C F + RH
Sbjct: 470 DR--PYRCDLCKAGFVRHHDLKRHLRI-HENGRPYVCE-CLKRFNRLDALNRH 518
Score = 29.5 bits (63), Expect = 0.95
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 226 RHPCVF--CPMTFKSRHHMKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQVHSSAD 283
++ C++ C +++++ H+ H + C C+ F L+ H+++H +
Sbjct: 442 KYVCLYNGCNKRIARKYNVESHI-QTHLS-DRPYRCDLCKAGFVRHHDLKRHLRIHENGR 499
Query: 284 SKVKCELCDKYFHSAIRLKKHKK 306
V CE C K F+ L +HK+
Sbjct: 500 PYV-CE-CLKRFNRLDALNRHKQ 520
Score = 27.5 bits (58), Expect = 3.8
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 9/91 (9%)
Query: 282 ADSKVKCEL--CDKYFHSAIRLKKHKKIVHPTKPKLRCEKCDKEFAHPHYLTRHKNAVHM 339
AD K C C+K ++ H + H + RC+ C F H L R H+
Sbjct: 439 ADGKYVCLYNGCNKRIARKYNVESHIQ-THLSDRPYRCDLCKAGFVRHHDLKR-----HL 492
Query: 340 EIDESNYEHECEXXXXXXXXXXYLSNHLQRH 370
I E+ + CE L+ H QR+
Sbjct: 493 RIHENGRPYVCECLKRFNRLDA-LNRHKQRN 522
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 33.9 bits (74), Expect = 0.044
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 50 ALTEEQRAMYQSVLSTWKPIMFPKSEKRYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVL 109
++T + + S + P P+ K+Y+C C + F ++L H R H+ E+
Sbjct: 42 SVTSNSKPVASSTAAKKDPNAPPQKVKQYVCETCTRAFARLEHLKRH-IRSHTNEKPFTC 100
Query: 110 CDI------CDKTFKNKHYLYMHKINKH 131
+I C + F + L H+ H
Sbjct: 101 SEIDGLPTGCGRQFSRRDLLLRHQQKIH 128
Score = 29.9 bits (64), Expect = 0.72
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 205 KPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHV---LNIHPPLESKVN-CP 260
KP + K+ V+++ C C F H+KRH+ N P S+++ P
Sbjct: 48 KPVASSTAAKKDPNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLP 107
Query: 261 E-CQKEF-KNDQYLREHMQVH 279
C ++F + D LR ++H
Sbjct: 108 TGCGRQFSRRDLLLRHQQKIH 128
Score = 29.1 bits (62), Expect = 1.3
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Query: 196 EKFICQLCQKPFKNHLNLKRHMQTQHTPVERHPC-------VFCPMTFKSRHHMKRHVLN 248
++++C+ C + F +LKRH+++ HT + C C F R + RH
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRS-HTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQK 126
Query: 249 IH 250
IH
Sbjct: 127 IH 128
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 31.9 bits (69), Expect = 0.18
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 11/96 (11%)
Query: 256 KVNCPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKL 315
K P C K +KN L+ H ++H C H+ V KP
Sbjct: 351 KCPVPNCDKAYKNQNGLKYH-KLHGH---------CSPITTPTPAPIPHQGFVVENKP-Y 399
Query: 316 RCEKCDKEFAHPHYLTRHKNAVHMEIDESNYEHECE 351
RCE C K + + + L H+ H+++ + + E +
Sbjct: 400 RCEVCSKRYKNLNGLKYHRTHSHLQVSMAQAQREVQ 435
Score = 29.5 bits (63), Expect = 0.95
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 71 FPKSEKRYICHKCNKEFKNYQNLYLHTTRVH 101
F K Y C C+K +KN L H T H
Sbjct: 392 FVVENKPYRCEVCSKRYKNLNGLKYHRTHSH 422
Score = 28.7 bits (61), Expect = 1.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 113 CDKTFKNKHYLYMHKINKHYSEI 135
CDK +KN++ L HK++ H S I
Sbjct: 357 CDKAYKNQNGLKYHKLHGHCSPI 379
Score = 26.6 bits (56), Expect = 6.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 110 CDICDKTFKNKHYLYMHKINKH 131
C++C K +KN + L H+ + H
Sbjct: 401 CEVCSKRYKNLNGLKYHRTHSH 422
Score = 26.2 bits (55), Expect = 8.8
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Query: 137 KCYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCITSNRE 196
KC C +K + L+ H K+H + P + +P+ + + N+
Sbjct: 351 KCPVPNCDKAYKNQNGLKYH--KLHGHCSP----ITTPTPAPIPH------QGFVVENKP 398
Query: 197 KFICQLCQKPFKNHLNLKRHMQTQHTPV 224
+ C++C K +KN LK H H V
Sbjct: 399 -YRCEVCSKRYKNLNGLKYHRTHSHLQV 425
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 30.3 bits (65), Expect = 0.54
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 9/112 (8%)
Query: 206 PFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESKVNCPECQKE 265
P K L + +H V+ P V + + H K +E K PE K
Sbjct: 592 PCKRGLGTITTVHKKHGSVDHLPSVKRRRSIANDFHGKPDYNKRSLSIERK---PEAFKT 648
Query: 266 FKNDQYLREHMQVHSSADSKVKCELCDK-----YFHSAIRLKKHKKIVHPTK 312
K D+ + H H ++DSK+K E K F + +R K K VH T+
Sbjct: 649 -KGDRPHKVHPSFHRNSDSKLKLEPSSKEKSGSMFFNTLRTVKDKSHVHDTQ 699
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 30.3 bits (65), Expect = 0.54
Identities = 45/207 (21%), Positives = 77/207 (37%), Gaps = 24/207 (11%)
Query: 32 ALKKPKDEVVKFI--SVNSDALTEEQRAMYQSVLSTWKPIMFPK-SEKRYICHKCNKEFK 88
A KK +D + KF S +E+ ++ S LS +P++ + E+ + +
Sbjct: 90 ASKKHRDNLSKFQRNSRIKKLQSEDASSIASSTLSMGEPVVDSEIEEEEDLASQLTSRAI 149
Query: 89 NYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEIEKCY--------- 139
+ NL LH R + + I +K +L+ + E E
Sbjct: 150 SLSNLSLHG-RESEPSKTELATSIPQSNEASKSHLFTQEPTPEEIEAELARRSSQRLSPR 208
Query: 140 -CQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCITSNREKF 198
C FC F + + H+K H +PE + + P Y E F
Sbjct: 209 DCLFCAASFSSFDTCKKHMKASHSLYIPEREYL-----VDEPSLFDYLAEKISIG----F 259
Query: 199 ICQLCQKPFKNHLNLKRHMQTQ-HTPV 224
C C + FK+ ++ HMQ + HT +
Sbjct: 260 TCLTCNREFKSLEAVRAHMQQKGHTSI 286
Score = 27.1 bits (57), Expect = 5.1
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 229 CVFCPMTFKSRHHMKRHVLNI--HPPLESKV-NCPECQKEFKNDQYL---REHMQVHSSA 282
C C + F + K H + H L+ KV + P E + L +++ +V A
Sbjct: 7 CTTCTVAFNNAESQKIHWKSDWHHYNLKRKVASLPPLSAEVFAGKILSIQKQNEEVQKKA 66
Query: 283 DSKVKCELCDKYFHSAIRLKKH 304
+ CE+C+K F+S H
Sbjct: 67 EFYQNCEVCNKKFYSEGAYSSH 88
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 29.9 bits (64), Expect = 0.72
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 5/77 (6%)
Query: 216 HMQTQHT--PVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESKVNCPE-CQKEFKNDQYL 272
H Q +H P PC CP K R +H+L P V C E C K +
Sbjct: 654 HPQVKHNCHPTSE-PCPPCPYFVKKRCLCGKHILENQPCYRENVRCGELCNKLLSCKTHF 712
Query: 273 REHMQVHSSADSKVKCE 289
E + H + + C+
Sbjct: 713 CEKL-CHPDGECESSCK 728
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 29.5 bits (63), Expect = 0.95
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 363 LSNHLQRHEQQQM-KRISRMVKTVIGEG-GEPNVVKKRGRPRKQRVEI 408
L+N+ Q+++++ K + + EG P V +KRGRPRK ++EI
Sbjct: 299 LANNSQKNKKRTPNKPLQESSINSVKEGESNPVVKRKRGRPRKNKLEI 346
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 286 VKCELCDKYFHSAIRLKKHKKIVHPTKPKLRCEKCDKEFAHPHYLTRHK 334
++CE+C +++H+ LK KK + + K C CD P R K
Sbjct: 1110 IECEICHEWYHAKC-LKMSKKKLRQDE-KFTCPICDYRVEIPRLSNRPK 1156
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 316 RCEKCDKEFAHPHYLTRHKNAVH 338
RC+KCD F LT HK H
Sbjct: 140 RCDKCDMMFVKQSGLTNHKRTYH 162
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 173 CGKEFQVPYKLRYHMESCITSNREKFICQLCQKPFKNHLNLKRHMQTQH 221
C K F R H S +N + FIC C F L RH+ +H
Sbjct: 24 CTKSFTRKEHARRHFRS--HTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
Score = 27.9 bits (59), Expect = 2.9
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 12/80 (15%)
Query: 262 CQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKH---KKI--------VHP 310
C K F ++ R H + H+++ + + C C F + L +H K + HP
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFI-CPHCSSSFTRSDVLNRHVNQKHVKQNDAGSQTHP 82
Query: 311 TKPKLRCEKCDKEFAHPHYL 330
K D+E P Y+
Sbjct: 83 KHDKTLISSSDQELPFPSYV 102
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 80 CHKCNKEFKNYQNLYLHTTRVHST--EEAAVLCDICDKTFKNK 120
C KC F N+ ++Y +H+T E C +C + ++ +
Sbjct: 158 CRKCGYIFCNFHSMYQIKLSIHATYDSENGFWCRVCRECYEGR 200
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 282 ADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLRCEKCDKEFAHPHYLTR 332
A ++CELC +++H+ KK+ K C CD P + R
Sbjct: 1181 AGMMIECELCHEWYHAKCMKMSKKKL--RADEKFICPICDYRVEVPRHSHR 1229
>SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit
Rep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 472
Score = 27.5 bits (58), Expect = 3.8
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 194 NREKFICQLCQKPFKNHLNLKRHMQTQHTPVER 226
+R +FIC C KPF + L+ H ++ + VER
Sbjct: 416 SRSRFICCYCTKPFLSISKLQEH-ESSCSHVER 447
>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 330
Score = 27.5 bits (58), Expect = 3.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 314 KLRCEKCDKEFAHPHYLTRHKNAVHMEIDESNYEH 348
+LRC+KC A YL H+ DE+NY H
Sbjct: 231 ELRCKKCRFVLASSDYLVSHEPK-----DENNYSH 260
>SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 329
Score = 27.1 bits (57), Expect = 5.1
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 287 KCELCDKYFHSAIRLKKHKKIVHP---TKPKLRCEKCDKEFAHPHYLTRHKNAV 337
+C LC+ +FH K +K I P T L C +C +++ H L + ++
Sbjct: 140 QCILCEDWFHEKCLQKTNKGIAIPDAETFEWLVCSECSEKY-RDHLLNQKHESI 192
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 27.1 bits (57), Expect = 5.1
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 386 IGEGGEPNVVKKRGRPRK 403
I EG EP + +KRGRP K
Sbjct: 114 IDEGSEPIIKRKRGRPPK 131
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 77 RYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDI--CDKTFKNKHYLYMHK 127
RY C +C + F +L +HT T E +CD C K F + + H+
Sbjct: 467 RYRCTECLQGFSRPSSLKIHT--YSHTGERPFVCDYAGCGKAFNVRSNMRRHQ 517
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Query: 76 KRYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKN 119
K Y+C CNK+F + L L T E C++C K+
Sbjct: 134 KGYVCPFCNKKFSSLDVLSL------VTNEGTFACNVCGTELKD 171
>SPBC660.13c |ssb1|rpa1, rad11|DNA replication factor A subunit Ssb1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 609
Score = 27.1 bits (57), Expect = 5.1
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 316 RCEKCDKEFAHPHY 329
RCEKC+KE+ P Y
Sbjct: 494 RCEKCNKEYDAPQY 507
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 26.6 bits (56), Expect = 6.7
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 50 ALTEEQRAMYQSVLSTWKPIMFPKSEKRYICHKCNKEFKNYQNLYL-HTTRVHSTEEAAV 108
A EE+ + Q + + + +S KR+ K+ K+ Q+ + H HS E A
Sbjct: 640 AQKEEEERIAQQKREEKRRLAYEESLKRHAKKLHEKKTKSSQDATIDHHLTSHSPESIAF 699
Query: 109 LCDICDKTFKNKHYLYMHKINK 130
+ K F NK Y K+ K
Sbjct: 700 KA-VLAKFFANKTARYQEKLGK 720
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 36 PKDEVVKFISVNSDALTEEQRAMYQSVLSTWKPIMFPKSEKRYICHKCNKEFKNYQNLYL 95
P+D KF+S + + ++Q + T K + P S + + K+ +Y YL
Sbjct: 504 PEDYSPKFLSQHESFVYKQQPPSTDDLYGTMKKLKIPFSIPTNVHYSSEKDIPSYSQEYL 563
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 134 EIEKCYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQV 179
+ E C + HEF + LQ +IH L + ++ + F++
Sbjct: 2303 QFENIICPYFNHEFSNEQLLQQKFIRIHWEVLEAVAGIQVIQHFEI 2348
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 108 VLCDICDKTFKNKHYLYMHK-INKHYSEIEKCYCQFCLHEFKTRK 151
++C +C+K F++++ L H+ KH + K + H + +K
Sbjct: 270 IMCMVCNKNFRSQNQLENHENSKKHKKNLRKMNQEIKKHAKEAQK 314
>SPBC25B2.10 |||Usp |Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 26.2 bits (55), Expect = 8.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 231 FCPMTFKSRHHMKRHVLNIHPP 252
FCP F+ HH + H L PP
Sbjct: 80 FCPPQFEEYHHGRSHSLVSPPP 101
>SPCC1259.03 |rpa12||DNA-directed RNA polymerase complex I subunit
Rpa12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 119
Score = 26.2 bits (55), Expect = 8.8
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 259 CPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLRCE 318
C +CQ + ++Q+ ++ SSA S L K HS ++++ K+ + K C
Sbjct: 27 CDQCQSVYPSEQFANLVVETKSSA-SAFPSAL--KLKHSIVQVESQKEEAATIEEK--CP 81
Query: 319 KCDKEFAHPHYL 330
KC + H L
Sbjct: 82 KCGNDHMTFHTL 93
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 26.2 bits (55), Expect = 8.8
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 9/105 (8%)
Query: 312 KPKLRCEKCDKEFAHPHY------LTRHKNAVHMEIDES-NYEHECEXXXXXXXXXXYLS 364
KP++ EK + H + L RH N V + D S ++ H+ ++
Sbjct: 444 KPQISKEKKNPNVTHEEFVEKSTALPRHINKVEIVSDSSESFAHKNNEKRFDKEASGRIN 503
Query: 365 NHLQRHEQQQMKRISRMVKTVIGEGGEPNVVKKRGRPRKQRVEIE 409
+ R EQQQ+ +R E + + R R RK+ EI+
Sbjct: 504 D--LRAEQQQIMLEARQKAIERRRNEEEELARSRERARKKAEEIK 546
>SPBC2F12.11c |rep2||transcriptional activator
Rep2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 219
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 305 KKIVHPTKPKLRCEKCDKEFAHPHYLTRHK 334
+K + PT P L C KC+ F H L H+
Sbjct: 166 QKALRPT-PNLICSKCNTTFNHSTALMMHE 194
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.134 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,961,990
Number of Sequences: 5004
Number of extensions: 84960
Number of successful extensions: 389
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 270
Number of HSP's gapped (non-prelim): 101
length of query: 429
length of database: 2,362,478
effective HSP length: 75
effective length of query: 354
effective length of database: 1,987,178
effective search space: 703461012
effective search space used: 703461012
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 55 (26.2 bits)
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