Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001720-TA|BGIBMGA001720-PA|IPR007087|Zinc finger,
C2H2-type, IPR000637|HMG-I and HMG-Y, DNA-binding
(429 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 96 2e-21
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 38 7e-04
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 31 0.046
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 31 0.080
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 28 0.56
AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 27 1.3
AJ697727-1|CAG26920.1| 285|Anopheles gambiae putative odorant-b... 26 1.7
AY462096-1|AAS21248.1| 603|Anopheles gambiae transposase protein. 26 2.3
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 25 4.0
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 24 6.9
CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein ... 24 9.2
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 95.9 bits (228), Expect = 2e-21
Identities = 73/287 (25%), Positives = 113/287 (39%), Gaps = 14/287 (4%)
Query: 99 RVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEIEKCYCQFCLHEFKTRKALQMHVK 158
R + + +C+ C+ T NK +L + H SE C C FKT +LQ HV
Sbjct: 118 RTQQSTGSTYMCNYCNYT-SNKLFLLSRHLKTH-SEDRPHKCVVCERGFKTLASLQNHV- 174
Query: 159 KIHPNTLPELKCVECGKEFQVPYKLRYHMESCITSNREKFICQLCQKPFKNHLNLKRHMQ 218
H T P +C C F +L H+ T R C C LKRH++
Sbjct: 175 NTHTGTKPH-RCKHCDNCFTTSGELIRHIRYRHTHER-PHKCTECDYASVELSKLKRHIR 232
Query: 219 TQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQV 278
T HT + C C + + RH + IH E +C C F L+ H +
Sbjct: 233 T-HTGEKPFQCPHCTYASPDKFKLTRH-MRIHTG-EKPYSCDVCFARFTQSNSLKAHKMI 289
Query: 279 HSSADSKV-KCELCDKYFHSAIRLKKHKKIVHPTKPKLRCEKCDKEFAHPHYLTRHKNAV 337
H + V +C+LC L+ H + +H ++C++CD F R+ +
Sbjct: 290 HQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFP-----DRYSYKM 344
Query: 338 HMEIDESNYEHECEXXXXXXXXXXYLSNHLQRHEQQQMKRISRMVKT 384
H + E + CE +L +HL H Q+ + + +T
Sbjct: 345 HAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQT 391
Score = 81.8 bits (193), Expect = 3e-17
Identities = 74/272 (27%), Positives = 101/272 (37%), Gaps = 19/272 (6%)
Query: 76 KRYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEI 135
K + C C+ F L H R T E C CD L H I H E
Sbjct: 181 KPHRCKHCDNCFTTSGELIRHI-RYRHTHERPHKCTECDYASVELSKLKRH-IRTHTGE- 237
Query: 136 EKCYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCITSNR 195
+ C C + + L H++ IH P C C F L+ H N+
Sbjct: 238 KPFQCPHCTYASPDKFKLTRHMR-IHTGEKP-YSCDVCFARFTQSNSLKAHKMIHQVGNK 295
Query: 196 EKFICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLES 255
F C+LC +L+ H+Q HT + C C TF R+ K H H E
Sbjct: 296 PVFQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHA-KTHEG-EK 353
Query: 256 KVNCPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVH------ 309
C C + ++L H+ +H+ KC+ C + F LK+H H
Sbjct: 354 CYRCEYCPYASISMRHLESHLLLHTD-QKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVA 412
Query: 310 PTKPKLR---CEKCDKEFAHPHYLTRHKNAVH 338
PT PK + C C + F H L RH A+H
Sbjct: 413 PT-PKAKTHICPTCKRPFRHKGNLIRHM-AMH 442
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 37.5 bits (83), Expect = 7e-04
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 191 ITSNREKFICQLCQKPFKNHLNLKRHMQTQHTPVERH---PCVFCPMTFKSRHHMKRHVL 247
ITS ++F C LC ++ L ++H H + C C F R + H+
Sbjct: 342 ITSEGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMR 401
Query: 248 NIHP 251
IHP
Sbjct: 402 AIHP 405
Score = 36.3 bits (80), Expect = 0.002
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 110 CDICDKTFKNKHYLYMHKINKHYSEIEK--CYCQFCLHEFKTRKALQMHVKKIHP 162
C++CD +++ K H+ H E C C F R+ Q+H++ IHP
Sbjct: 351 CNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIHP 405
Score = 35.1 bits (77), Expect = 0.004
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 280 SSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPK---LRCEKCDKEFAHPHYLTRHKNA 336
+S + +C LCD + + ++ +KH+ VH + ++C C K F+ H A
Sbjct: 343 TSEGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRA 402
Query: 337 VH 338
+H
Sbjct: 403 IH 404
Score = 33.5 bits (73), Expect = 0.011
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 256 KVNCPECQKEFKND-QYLREHMQVH--SSADSKVKCELCDKYFHSAIRLKKHKKIVHPTK 312
+ C C ++ QY + +VH S+ + +KC +C K F + H + +HP K
Sbjct: 348 RFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIHP-K 406
Query: 313 P 313
P
Sbjct: 407 P 407
Score = 31.9 bits (69), Expect = 0.035
Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 5/120 (4%)
Query: 72 PKSEKRYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKH 131
P + Y C C F N Y H+ ++ + +++ + I
Sbjct: 286 PTNHHLYRCPACGNLFVELTNFYNHSCTKAPAQDGVAVASSNNQSQPARTGGSAVTIT-- 343
Query: 132 YSEIEKCYCQFCLHEFKTRKALQMHVKKIH--PNTLPELKCVECGKEFQVPYKLRYHMES 189
SE ++ C C ++T+ Q H ++H N +KC C K F + HM +
Sbjct: 344 -SEGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRA 402
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 31.5 bits (68), Expect = 0.046
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Query: 198 FICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESK 256
+ C C K N + H H P + H C C F R +MK H HP L +
Sbjct: 899 YSCVSCHKTVSN----RWHHANIHRP-QSHECPVCGQKFTRRDNMKAHCKVKHPELRDR 952
Score = 29.5 bits (63), Expect = 0.18
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 11/75 (14%)
Query: 89 NYQNLYLHTTRVHSTEEAAVLCDICDKTFKNK-HYLYMHKINKHYSEIEKCYCQFCLHEF 147
+Y +L++ T T + C C KT N+ H+ +H+ H C C +F
Sbjct: 883 DYSSLFIQLTGTFPTLYS---CVSCHKTVSNRWHHANIHRPQSHE-------CPVCGQKF 932
Query: 148 KTRKALQMHVKKIHP 162
R ++ H K HP
Sbjct: 933 TRRDNMKAHCKVKHP 947
Score = 27.5 bits (58), Expect = 0.74
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 5/53 (9%)
Query: 258 NCPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHP 310
+C C K N + H +H + C +C + F +K H K+ HP
Sbjct: 900 SCVSCHKTVSNRWH---HANIHRPQSHE--CPVCGQKFTRRDNMKAHCKVKHP 947
Score = 24.2 bits (50), Expect = 6.9
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
Query: 268 NDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLRCEKCDKEFAHP 327
N Y +Q+ + + C C H + + H +H + C C ++F
Sbjct: 881 NIDYSSLFIQLTGTFPTLYSCVSC----HKTVSNRWHHANIHRPQSH-ECPVCGQKFTRR 935
Query: 328 HYLTRHKNAVHMEIDESNYEH 348
+ H H E+ + Y H
Sbjct: 936 DNMKAHCKVKHPELRDRFYNH 956
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 30.7 bits (66), Expect = 0.080
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 210 HL-NLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESKVNCPECQKE 265
HL ++++H + H P HP + P + HH H + HP L + P Q++
Sbjct: 127 HLPHVQQHHPSVHHPAH-HPLHYQPAAAAAMHHHHHHPHHHHPGLTGLMQAPSQQQQ 182
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 27.9 bits (59), Expect = 0.56
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 253 LESKVNCPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHP 310
L N C+ K ++R H VH + +C LC + + L+ H K HP
Sbjct: 493 LSGGCNLHRCKLCGKVVTHIRNHYHVHFPG--RFECPLCRATYTRSDNLRTHCKFKHP 548
Score = 24.6 bits (51), Expect = 5.2
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 232 CPMTFKSRHHMKRHVLNIHPPLESKVNCPECQKEFKNDQYLREH 275
C + K H++ H ++H P + CP C+ + LR H
Sbjct: 502 CKLCGKVVTHIRNHY-HVHFP--GRFECPLCRATYTRSDNLRTH 542
Score = 23.8 bits (49), Expect = 9.2
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 169 KCVECGKEFQVPYKLRYHMESCITSNREKFICQLCQKPFKNHLNLKRHMQTQH 221
+C CGK V +R H +F C LC+ + NL+ H + +H
Sbjct: 501 RCKLCGK---VVTHIRNHYHVHFPG---RFECPLCRATYTRSDNLRTHCKFKH 547
>AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein
protein.
Length = 476
Score = 26.6 bits (56), Expect = 1.3
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 33 LKKPKDEVVKFISVNSDALTEEQRAMYQSVLSTWKPIMFPKSEKRYICHKCNK 85
L+ D+ + V S L E Q+ M +S S + I+ EK+ CH+C K
Sbjct: 159 LETRSDDDLTMELVKSKLLDEAQKRMEKSHQS--ESILRVGPEKKITCHRCRK 209
>AJ697727-1|CAG26920.1| 285|Anopheles gambiae putative
odorant-binding protein OBPjj17 protein.
Length = 285
Score = 26.2 bits (55), Expect = 1.7
Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 318 EKCDKEFAHPHYLTRHKNAVHMEIDESNYEH-ECEXXXXXXXXXXYLSNHLQR 369
E C K Y R +H E+D S YE CE +++ +QR
Sbjct: 57 ECCSKPQWINRYAVRRCRYIHAEVDGSRYERGSCEARCGLFKINMTMTDRIQR 109
>AY462096-1|AAS21248.1| 603|Anopheles gambiae transposase protein.
Length = 603
Score = 25.8 bits (54), Expect = 2.3
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 280 SSADSKVKCELCDKYFH----SAIRLKKHKKIVHPTKPKLR 316
S ++ KC C K F + LK+H +VH T P L+
Sbjct: 17 SPVETGAKCLYCLKVFKYTKGTTSNLKRHLNLVHKTVPYLK 57
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 25.0 bits (52), Expect = 4.0
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 378 ISRMVKTVIGEGGEPNVVKKRGRPRKQRVEIEFIKCEP 415
ISR+ V +P+ +KR RP K+++++E +P
Sbjct: 140 ISRLHSVVEFSSAKPSDPRKRVRPLKKQLDLEAAWMQP 177
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 24.2 bits (50), Expect = 6.9
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 87 FKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNK 120
F+ + L T R H+T+ +++ DI + F N+
Sbjct: 117 FQGLKQLVNLTLRTHNTDWSSISLDIAPQVFTNE 150
>CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein
protein.
Length = 196
Score = 23.8 bits (49), Expect = 9.2
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
Query: 131 HYSEIEKCYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESC 190
++ E ++CY + + K + + K HP +P +C + K+R+ M C
Sbjct: 95 YHPETQQCYQMYTRGYCPSGKIIYIEPKGKHPECVPN-QCAD--------GKVRF-MNVC 144
Query: 191 ITSNREKFICQL 202
N+E +C L
Sbjct: 145 AVLNQEHQLCHL 156
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.322 0.134 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,247
Number of Sequences: 2123
Number of extensions: 18942
Number of successful extensions: 81
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 33
Number of HSP's gapped (non-prelim): 24
length of query: 429
length of database: 516,269
effective HSP length: 66
effective length of query: 363
effective length of database: 376,151
effective search space: 136542813
effective search space used: 136542813
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 49 (23.8 bits)
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