Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001720-TA|BGIBMGA001720-PA|IPR007087|Zinc finger,
C2H2-type, IPR000637|HMG-I and HMG-Y, DNA-binding
(429 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 71 2e-12
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 56 3e-08
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 48 2e-05
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 48 2e-05
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 47 3e-05
At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein ... 46 4e-05
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 41 0.001
At4g26030.1 68417.m03748 hypothetical protein 40 0.004
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 38 0.017
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 38 0.017
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 37 0.022
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 36 0.039
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 36 0.052
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 36 0.069
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 35 0.091
At2g13950.1 68415.m01550 DC1 domain-containing protein contains ... 35 0.091
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 35 0.12
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 34 0.16
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 34 0.16
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 34 0.21
At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein ... 33 0.28
At5g02340.1 68418.m00157 DC1 domain-containing protein contains ... 33 0.28
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 33 0.28
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 33 0.37
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 33 0.37
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 33 0.37
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 33 0.37
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 33 0.48
At5g54360.1 68418.m06769 zinc finger (C2H2 type) family protein-... 33 0.48
At3g25910.1 68416.m03230 expressed protein 33 0.48
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 33 0.48
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 33 0.48
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 32 0.64
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 32 0.64
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 32 0.64
At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ... 32 0.85
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 32 0.85
At2g23070.1 68415.m02750 casein kinase II alpha chain, putative ... 32 0.85
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 32 0.85
At4g16845.1 68417.m02543 vernalization 2 protein (VRN2) identica... 31 1.1
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 31 1.1
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 31 1.5
At3g28650.1 68416.m03576 DC1 domain-containing protein similar ... 31 2.0
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 31 2.0
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 31 2.0
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 30 2.6
At3g01440.1 68416.m00068 oxygen evolving enhancer 3 (PsbQ) famil... 30 2.6
At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein ... 30 2.6
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 30 2.6
At5g60040.1 68418.m07529 DNA-directed RNA polymerase, putative s... 30 3.4
At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein ... 30 3.4
At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein ... 30 3.4
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 30 3.4
At1g36950.1 68414.m04606 zinc finger protein-related contains si... 30 3.4
At1g34095.1 68414.m04227 expressed protein ; expression supporte... 30 3.4
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 29 4.5
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 29 4.5
At5g09740.1 68418.m01128 histone acetyltransferase, putative sim... 29 4.5
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 29 4.5
At4g27240.1 68417.m03911 zinc finger (C2H2 type) family protein ... 29 6.0
At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein ... 29 6.0
At3g13020.1 68416.m01622 hAT dimerisation domain-containing prot... 29 6.0
At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein ... 29 6.0
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 29 6.0
At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein ... 29 6.0
At5g64610.1 68418.m08119 histone acetyltransferase, putative sim... 29 7.9
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 29 7.9
At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein ... 29 7.9
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 29 7.9
At3g46810.1 68416.m05081 DC1 domain-containing protein contains ... 29 7.9
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 70.5 bits (165), Expect = 2e-12
Identities = 71/279 (25%), Positives = 115/279 (41%), Gaps = 16/279 (5%)
Query: 73 KSEKRYICHKCNKEFKNYQNLYLHTTRVHSTEEA-AVLCDICDKTFKNKHYLYMHKINKH 131
+S + C +C EFK +L H + HS E + D C +++ K +L H + H
Sbjct: 61 ESSSNHTCQECGAEFKKPAHLKQH-MQSHSLERSFTCYVDDCAASYRRKDHLNRHLLT-H 118
Query: 132 YSEIEKCYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGK-EFQVPYKLRYHMESC 190
++ KC + C EF + + HVKK H N + G + K E
Sbjct: 119 KGKLFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDNTGLGDGDKDNTCKGDDDKEKS 178
Query: 191 ITSNREKFICQLCQKPFKNHLNLKRHMQTQHTPVERHPC--VFCPMTFKSRHHMKRHVLN 248
+ EK N+ N T ++ C + C FK +++H +
Sbjct: 179 GSGGCEKENEGNGGSGKDNNGNGDSQPAECSTGQKQVVCKEIGCGKAFKYPSQLQKH-QD 237
Query: 249 IHPPLES-KVNC--PECQKEFKNDQYLREHMQVHSSADSKVKCELC-DKYFHSAIR--LK 302
H L+S + C P C K F N++ L+ H++ S + CE+C K+ I+ L+
Sbjct: 238 SHVKLDSVEAFCSEPGCMKYFTNEECLKSHIR---SCHQHINCEICGSKHLKKNIKRHLR 294
Query: 303 KHKKIVHPTKPKLRCEKCDKEFAHPHYLTRHKNAVHMEI 341
H + P + K E C F+ L +H AVH +I
Sbjct: 295 THDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDI 333
Score = 55.6 bits (128), Expect = 6e-08
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 19/159 (11%)
Query: 190 CITSNREKFICQL-CQKPFKNHLNLKRHMQTQHTPVERHPCVF----CPMTFKSRHHMKR 244
C T ++ ++ C K FK L++H Q H ++ C F + +K
Sbjct: 208 CSTGQKQVVCKEIGCGKAFKYPSQLQKH-QDSHVKLDSVEAFCSEPGCMKYFTNEECLKS 266
Query: 245 HVLNIHPPLESKVNCPEC-QKEFKNDQYLREHMQVHS--SADSKVKCEL--CDKYFHSAI 299
H+ + H +NC C K K + ++ H++ H S+ ++KCE+ C F A
Sbjct: 267 HIRSCH----QHINCEICGSKHLKKN--IKRHLRTHDEDSSPGEIKCEVEGCSSTFSKAS 320
Query: 300 RLKKHKKIVHPTKPKLRC--EKCDKEFAHPHYLTRHKNA 336
L+KH K VH C C FA+ H +H+N+
Sbjct: 321 NLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENS 359
Score = 47.6 bits (108), Expect = 2e-05
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 109 LCDICDKTFKNKHYLYMHKINKHYSEIEKCYCQFCLHEFKTRKALQMHVKKIHPNTLPEL 168
LC C + ++K+YL I H+ Q L E + +A ++ + +T
Sbjct: 21 LCQYCGIS-RSKNYLITKHIQSHH--------QMELEEERDDEACEVDEESSSNHT---- 67
Query: 169 KCVECGKEFQVPYKLRYHMESCITSNREKFICQL--CQKPFKNHLNLKRHMQTQHTPVER 226
C ECG EF+ P L+ HM+S S F C + C ++ +L RH+ T + +
Sbjct: 68 -CQECGAEFKKPAHLKQHMQS--HSLERSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFK 124
Query: 227 HPCVFCPMTFKSRHHMKRHVLNIH 250
P C F + ++ RHV H
Sbjct: 125 CPKENCKSEFSVQGNVGRHVKKYH 148
Score = 36.7 bits (81), Expect = 0.030
Identities = 32/111 (28%), Positives = 43/111 (38%), Gaps = 9/111 (8%)
Query: 83 CNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTF--KN-KHYLYMHKINKHYSEIEKCY 139
C K F N + L H H + C+IC KN K +L H + EI KC
Sbjct: 254 CMKYFTNEECLKSHIRSCHQH----INCEICGSKHLKKNIKRHLRTHDEDSSPGEI-KCE 308
Query: 140 CQFCLHEFKTRKALQMHVKKIHPNTLPEL-KCVECGKEFQVPYKLRYHMES 189
+ C F LQ H+K +H + P + CG F + H S
Sbjct: 309 VEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENS 359
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 56.4 bits (130), Expect = 3e-08
Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 14/240 (5%)
Query: 111 DICDKTFKNKHYLYMHKINKHYSEIEKCYCQFCLHEFKTRKALQMHVKKIHPNTLPELKC 170
D C +++ K +L H + H ++ KC + C EF + + HVKK H N +
Sbjct: 11 DDCAASYRRKDHLNRHLLT-HKGKLFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDN 69
Query: 171 VECGK-EFQVPYKLRYHMESCITSNREKFICQLCQKPFKNHLNLKRHMQTQHTPVERHPC 229
G + K E + EK N+ N T ++ C
Sbjct: 70 TGLGDGDKDNTCKGDDDKEKSGSGGCEKENEGNGGSGKDNNGNGDSQPAECSTGQKQVVC 129
Query: 230 --VFCPMTFKSRHHMKRHVLNIHPPLES-KVNC--PECQKEFKNDQYLREHMQVHSSADS 284
+ C FK +++H + H L+S + C P C K F N++ L+ H++ S
Sbjct: 130 KEIGCGKAFKYPSQLQKHQ-DSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIR---SCHQ 185
Query: 285 KVKCELC-DKYFHSAIR--LKKHKKIVHPTKPKLRCEKCDKEFAHPHYLTRHKNAVHMEI 341
+ CE+C K+ I+ L+ H + P + K E C F+ L +H AVH +I
Sbjct: 186 HINCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDI 245
Score = 55.6 bits (128), Expect = 6e-08
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 19/159 (11%)
Query: 190 CITSNREKFICQL-CQKPFKNHLNLKRHMQTQHTPVERHPCVF----CPMTFKSRHHMKR 244
C T ++ ++ C K FK L++H Q H ++ C F + +K
Sbjct: 120 CSTGQKQVVCKEIGCGKAFKYPSQLQKH-QDSHVKLDSVEAFCSEPGCMKYFTNEECLKS 178
Query: 245 HVLNIHPPLESKVNCPEC-QKEFKNDQYLREHMQVHS--SADSKVKCEL--CDKYFHSAI 299
H+ + H +NC C K K + ++ H++ H S+ ++KCE+ C F A
Sbjct: 179 HIRSCH----QHINCEICGSKHLKKN--IKRHLRTHDEDSSPGEIKCEVEGCSSTFSKAS 232
Query: 300 RLKKHKKIVHPTKPKLRC--EKCDKEFAHPHYLTRHKNA 336
L+KH K VH C C FA+ H +H+N+
Sbjct: 233 NLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENS 271
Score = 36.7 bits (81), Expect = 0.030
Identities = 32/111 (28%), Positives = 43/111 (38%), Gaps = 9/111 (8%)
Query: 83 CNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTF--KN-KHYLYMHKINKHYSEIEKCY 139
C K F N + L H H + C+IC KN K +L H + EI KC
Sbjct: 166 CMKYFTNEECLKSHIRSCHQH----INCEICGSKHLKKNIKRHLRTHDEDSSPGEI-KCE 220
Query: 140 CQFCLHEFKTRKALQMHVKKIHPNTLPEL-KCVECGKEFQVPYKLRYHMES 189
+ C F LQ H+K +H + P + CG F + H S
Sbjct: 221 VEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENS 271
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 47.6 bits (108), Expect = 2e-05
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 9/97 (9%)
Query: 226 RHPCVFCPMTFKSRHHMKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQV--HSSAD 283
RH CV C F R H+ H+ + L C C K K+ + +REH+ V H S
Sbjct: 16 RHRCVACYKMFNRREHLVEHMKISYHSLHQP-RCGVCLKHCKSFESVREHLNVPDHLSKG 74
Query: 284 S------KVKCELCDKYFHSAIRLKKHKKIVHPTKPK 314
+ K C LC + F A L +HK H + P+
Sbjct: 75 NCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPR 111
Score = 38.3 bits (85), Expect = 0.010
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 259 CPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIV-HPTK----- 312
C C K F ++L EHM++ + + +C +C K+ S +++H + H +K
Sbjct: 19 CVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCKA 78
Query: 313 --PKLRCEKCDKEFAHPHYLTRHKNAVHM 339
K C C + F L HKN H+
Sbjct: 79 IFTKRGCTLCLQIFEEAFALAEHKNKCHL 107
Score = 33.1 bits (72), Expect = 0.37
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 200 CQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESKVNC 259
C C K F +L HM+ + + + C C KS ++ H LN+ P SK NC
Sbjct: 19 CVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREH-LNV-PDHLSKGNC 76
Query: 260 PECQKEFKNDQYLREHMQVHSSADSKVKCEL 290
+ L+ + + A+ K KC L
Sbjct: 77 KAIFTKRGCTLCLQIFEEAFALAEHKNKCHL 107
Score = 29.1 bits (62), Expect = 6.0
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 10/97 (10%)
Query: 73 KSEKRYICHKCNKEFKNYQNLYLHTT-RVHSTEEAAVLCDICDKTFKNKHYLYMH-KINK 130
K R+ C C K F ++L H HS + C +C K K+ + H +
Sbjct: 12 KISVRHRCVACYKMFNRREHLVEHMKISYHSLHQPR--CGVCLKHCKSFESVREHLNVPD 69
Query: 131 HYSE------IEKCYCQFCLHEFKTRKALQMHVKKIH 161
H S+ K C CL F+ AL H K H
Sbjct: 70 HLSKGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCH 106
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 47.6 bits (108), Expect = 2e-05
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 9/97 (9%)
Query: 226 RHPCVFCPMTFKSRHHMKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQV--HSSAD 283
RH CV C F R H+ H+ + L C C K K+ + +REH+ V H S
Sbjct: 16 RHRCVACYKMFNRREHLVEHMKISYHSLHQP-RCGVCLKHCKSFESVREHLNVPDHLSKG 74
Query: 284 S------KVKCELCDKYFHSAIRLKKHKKIVHPTKPK 314
+ K C LC + F A L +HK H + P+
Sbjct: 75 NCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPR 111
Score = 38.3 bits (85), Expect = 0.010
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 259 CPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIV-HPTK----- 312
C C K F ++L EHM++ + + +C +C K+ S +++H + H +K
Sbjct: 19 CVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCKA 78
Query: 313 --PKLRCEKCDKEFAHPHYLTRHKNAVHM 339
K C C + F L HKN H+
Sbjct: 79 IFTKRGCTLCLQIFEEAFALAEHKNKCHL 107
Score = 33.1 bits (72), Expect = 0.37
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 200 CQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESKVNC 259
C C K F +L HM+ + + + C C KS ++ H LN+ P SK NC
Sbjct: 19 CVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREH-LNV-PDHLSKGNC 76
Query: 260 PECQKEFKNDQYLREHMQVHSSADSKVKCEL 290
+ L+ + + A+ K KC L
Sbjct: 77 KAIFTKRGCTLCLQIFEEAFALAEHKNKCHL 107
Score = 29.1 bits (62), Expect = 6.0
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 10/97 (10%)
Query: 73 KSEKRYICHKCNKEFKNYQNLYLHTT-RVHSTEEAAVLCDICDKTFKNKHYLYMH-KINK 130
K R+ C C K F ++L H HS + C +C K K+ + H +
Sbjct: 12 KISVRHRCVACYKMFNRREHLVEHMKISYHSLHQPR--CGVCLKHCKSFESVREHLNVPD 69
Query: 131 HYSE------IEKCYCQFCLHEFKTRKALQMHVKKIH 161
H S+ K C CL F+ AL H K H
Sbjct: 70 HLSKGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCH 106
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 46.8 bits (106), Expect = 3e-05
Identities = 47/180 (26%), Positives = 66/180 (36%), Gaps = 11/180 (6%)
Query: 138 CYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCITSNREK 197
C C F AL+ H IH CGK+F KL+ H I +
Sbjct: 81 CSYDGCGKTFFDVSALRKH-SHIHGERQYVCDQEGCGKKFLDSSKLKRHY--LIHTGERN 137
Query: 198 FICQL--CQKPFKNHLNLKRHMQTQHTPVERHPCVF--CPMTFKSRHHMKRHVLNIHPPL 253
+IC C K F NL+ HM+T H+ H C + C + + +K HV H
Sbjct: 138 YICTYEGCGKAFSLDFNLRSHMKT-HSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEKN 196
Query: 254 ---ESKVNCPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHP 310
E+ P +K + + S E C+K + +LK H K HP
Sbjct: 197 GGGETPKYTPPAEKVLRTVKTPATVCGPSSDRPYACPYEGCEKAYIHEYKLKLHLKREHP 256
Score = 42.3 bits (95), Expect = 6e-04
Identities = 48/184 (26%), Positives = 73/184 (39%), Gaps = 14/184 (7%)
Query: 103 TEEAAVLC--DICDKTFKNKHYLYMHKINKHYSEIEKCYCQFCLHEFKTRKALQMHVKKI 160
T E LC D C KTF + L H + H C + C +F L+ H I
Sbjct: 74 TTEILFLCSYDGCGKTFFDVSALRKHS-HIHGERQYVCDQEGCGKKFLDSSKLKRHYL-I 131
Query: 161 HPNTLPELKCVE-CGKEFQVPYKLRYHMESCITSNREKF-ICQL--CQKPFKNHLNLKRH 216
H + E CGK F + + LR HM+ T ++E + IC C K + + LK H
Sbjct: 132 HTGERNYICTYEGCGKAFSLDFNLRSHMK---THSQENYHICPYSGCVKRYAHEYKLKNH 188
Query: 217 MQTQHTP-VERHPCVFCPMTFKSRHHMKRHVLNIHPPLESKVNCP--ECQKEFKNDQYLR 273
+ H + P K +K P + CP C+K + ++ L+
Sbjct: 189 VAAYHEKNGGGETPKYTPPAEKVLRTVKTPATVCGPSSDRPYACPYEGCEKAYIHEYKLK 248
Query: 274 EHMQ 277
H++
Sbjct: 249 LHLK 252
Score = 39.1 bits (87), Expect = 0.006
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Query: 232 CPMTFKSRHHMKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQVHSSADSKV-KCEL 290
C TF +++H +IH + + C K+F + L+ H +H+ + + E
Sbjct: 86 CGKTFFDVSALRKHS-HIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEG 144
Query: 291 CDKYFHSAIRLKKHKKIVHPTKPKLRC--EKCDKEFAHPHYLTRHKNAVH 338
C K F L+ H K H + C C K +AH + L H A H
Sbjct: 145 CGKAFSLDFNLRSHMK-THSQENYHICPYSGCVKRYAHEYKLKNHVAAYH 193
Score = 35.9 bits (79), Expect = 0.052
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 13/120 (10%)
Query: 198 FICQL--CQKPFKNHLNLKRHMQTQHTPVER-HPC--VFCPMTFKSRHHMKRHVLNIHPP 252
F+C C K F + L++H H ER + C C F +KRH L IH
Sbjct: 79 FLCSYDGCGKTFFDVSALRKH---SHIHGERQYVCDQEGCGKKFLDSSKLKRHYL-IHTG 134
Query: 253 LESKVNCPE-CQKEFKNDQYLREHMQVHSSADSKVKCEL--CDKYFHSAIRLKKHKKIVH 309
+ + E C K F D LR HM+ HS + + C C K + +LK H H
Sbjct: 135 ERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHI-CPYSGCVKRYAHEYKLKNHVAAYH 193
>At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 907
Score = 46.4 bits (105), Expect = 4e-05
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 13/125 (10%)
Query: 110 CDICDKTFKNKHYLYMHKINKHYSEI-EKCY---CQFCLHEFKTRKALQMHVKKIHPNTL 165
C IC +F + L +H +H+ + EKC C C F ++ L +HV+ +HP+
Sbjct: 498 CAICLDSFVRRKLLEIHVEERHHVQFAEKCMLLQCIPCGSHFGDKEQLLVHVQAVHPSEC 557
Query: 166 PELKCV-EC----GKEFQVPY----KLRYHMESCITSNREKFICQLCQKPFKNHLNLKRH 216
L EC G+ Q P ++ + TS KF+C+ C F +L RH
Sbjct: 558 KSLTVASECNLTNGEFSQKPEAGSSQIVVSQNNENTSGVHKFVCKFCGLKFNLLPDLGRH 617
Query: 217 MQTQH 221
Q +H
Sbjct: 618 HQAEH 622
Score = 28.7 bits (61), Expect = 7.9
Identities = 29/127 (22%), Positives = 47/127 (37%), Gaps = 15/127 (11%)
Query: 198 FICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVF-----CPMTFKSRHHMKRHVLNIHP- 251
F C +C F L+ H++ +H C+ C F + + HV +HP
Sbjct: 496 FACAICLDSFVRRKLLEIHVEERHHVQFAEKCMLLQCIPCGSHFGDKEQLLVHVQAVHPS 555
Query: 252 PLESKVNCPEC--------QK-EFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLK 302
+S EC QK E + Q + ++S K C+ C F+ L
Sbjct: 556 ECKSLTVASECNLTNGEFSQKPEAGSSQIVVSQNNENTSGVHKFVCKFCGLKFNLLPDLG 615
Query: 303 KHKKIVH 309
+H + H
Sbjct: 616 RHHQAEH 622
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 41.1 bits (92), Expect = 0.001
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Query: 232 CPMTFKSRHHMKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQVHSSADSKVKC--E 289
C M+F S + H NI P C K F + +YL +H +VHS D +KC +
Sbjct: 1244 CTMSFSSEKQLMLHKRNICP-------IKGCGKNFFSHKYLVQHQRVHSD-DRPLKCPWK 1295
Query: 290 LCDKYFHSAIRLKKHKKIVHPTKPKLRCE-KCDKEFAHPHYLTRHKNAVHMEIDESN 345
C F A +H ++ +P + E C + F +RHK + ++N
Sbjct: 1296 GCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRHKRKTGHSVKKTN 1352
>At4g26030.1 68417.m03748 hypothetical protein
Length = 220
Score = 39.5 bits (88), Expect = 0.004
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 41 VKFISVNSDALTEEQRAMYQSVLSTWKPIMFPKSEKRYICHKCNKEFKNYQNLYLHTTRV 100
VK+I ++ L E + W + + + +IC KCN F Q L +HT +
Sbjct: 121 VKYICKPTEVLEEIHDEIDYEKDGGWIYSLPFEKDSSFICLKCNSLFDTSQMLVVHTELI 180
Query: 101 HSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEIEKC 138
HS E + + F K HKINK + + C
Sbjct: 181 HSKNETKKRLKLHHQEFHGK----SHKINKDQTGGQSC 214
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 37.5 bits (83), Expect = 0.017
Identities = 38/146 (26%), Positives = 58/146 (39%), Gaps = 16/146 (10%)
Query: 189 SCITSNREKFICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLN 248
S +T+NR FIC++C K FK NL+ H + + P + K +
Sbjct: 61 SLMTTNR--FICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQVKKKVYICPEKTCV 118
Query: 249 IHPPLESKVNCPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIV 308
H P + + +K F R+H + K KC+ C K + K H KI
Sbjct: 119 HHDPARALGDLTGIKKHFS-----RKH------GEKKWKCDKCSKKYAVMSDWKAHSKIC 167
Query: 309 HPTKPKLRCEKCDKEFAHPHYLTRHK 334
TK + RC+ C F+ H+
Sbjct: 168 -GTK-EYRCD-CGTLFSRKDSFITHR 190
Score = 32.7 bits (71), Expect = 0.48
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 77 RYICHKCNKEFKNYQNLYLH 96
R+IC CNK FK QNL LH
Sbjct: 67 RFICEVCNKGFKRDQNLQLH 86
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 37.5 bits (83), Expect = 0.017
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 77 RYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEIE 136
RY+C CN+ F+ QNL +H R H + D D+ + + Y+ H+ +
Sbjct: 38 RYVCEICNQGFQRDQNLQMHRRR-HKVPWKLLKRDKKDEEVRKRVYVCPEPTCLHH---D 93
Query: 137 KCYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESC 190
C H ++ H ++ H + + C C K + V + H+++C
Sbjct: 94 PC------HALGDLVGIKKHFRRKH-SVHKQWVCERCSKGYAVQSDYKAHLKTC 140
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 37.1 bits (82), Expect = 0.022
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 259 CPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLRCE 318
C C ++F ++L EHM++ + + C +C+K+ S L++H ++ P PK C+
Sbjct: 8 CGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREH--LIGPL-PKQECK 64
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 200 CQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESK 256
C C + F +L HM+ + V C C +S ++ H++ P E K
Sbjct: 8 CGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPKQECK 64
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 36.3 bits (80), Expect = 0.039
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 259 CPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLRCE 318
C C ++F ++L EHM++ + + C +C K+ S L++H ++ P PK C+
Sbjct: 17 CAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLREH--LIGPL-PKQECK 73
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 35.9 bits (79), Expect = 0.052
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 76 KRYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEI 135
K I H K K+++ L H R H ++ A C +C K F K H+ K+ ++
Sbjct: 232 KNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFA--CRMCGKAFAVKGDWRTHE--KNCGKL 287
Query: 136 EKCYCQFCLHEFKTRKALQMHVKKIHPNTLP 166
YC C +FK +++L+ HVK +P
Sbjct: 288 --WYCS-CGSDFKHKRSLKDHVKAFGNGHVP 315
Score = 31.9 bits (69), Expect = 0.85
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 148 KTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCITSNREKFICQLCQKPF 207
K + LQ H K+ H + C CGK F V R H ++C + + C C F
Sbjct: 244 KDFRTLQTHYKRKHGSK--PFACRMCGKAFAVKGDWRTHEKNC----GKLWYCS-CGSDF 296
Query: 208 KNHLNLKRHMQ 218
K+ +LK H++
Sbjct: 297 KHKRSLKDHVK 307
Score = 29.5 bits (63), Expect = 4.5
Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 8/140 (5%)
Query: 197 KFICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESK 256
+F C LC K F + N++ HM + + P + ++ P ++
Sbjct: 177 QFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESL--RGTQPTGMLRLPCFCCAPGCKNN 234
Query: 257 VNCPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLR 316
++ P K K+ + L+ H + C +C K F + H+K KL
Sbjct: 235 IDHPRA-KPLKDFRTLQTHYK-RKHGSKPFACRMCGKAFAVKGDWRTHEK----NCGKLW 288
Query: 317 CEKCDKEFAHPHYLTRHKNA 336
C +F H L H A
Sbjct: 289 YCSCGSDFKHKRSLKDHVKA 308
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 35.5 bits (78), Expect = 0.069
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 22/112 (19%)
Query: 197 KFICQLCQKPFKNHLNLKRHMQTQHTP----------VERHPCVFCPMTFKSRHH----- 241
+F+C++C K F+ NL+ H + + P ++ CP T + HH
Sbjct: 81 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQKNTKEQQKKKVYVCPETNCAHHHPSRAL 140
Query: 242 -----MKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQVHSSADSKVKC 288
+K+H H E K C +C K + + H ++ + D + C
Sbjct: 141 GDLTGIKKHFCRKHG--EKKWKCEKCSKFYAVQSDWKAHTKICGTRDYRCDC 190
Score = 30.3 bits (65), Expect = 2.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 77 RYICHKCNKEFKNYQNLYLH 96
R++C CNK F+ QNL LH
Sbjct: 81 RFVCEICNKGFQRDQNLQLH 100
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 35.1 bits (77), Expect = 0.091
Identities = 42/200 (21%), Positives = 77/200 (38%), Gaps = 17/200 (8%)
Query: 140 CQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCITSNREKFI 199
C+ C F+ +AL H ++IH +L +EF Y + ++ S+ +
Sbjct: 45 CKICGKSFECYQALGGH-QRIHRPIKEKLS----KQEFSEVYPRKSKLQKRPESSSSCYE 99
Query: 200 CQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVL---NIHPPLESK 256
C++C K F + L H + + + K+ V + E K
Sbjct: 100 CKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEK 159
Query: 257 -VNCPECQKEFKND--------QYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKI 307
++C E +++F LR +Q + S C++C K F + L HK++
Sbjct: 160 FLHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRV 219
Query: 308 VHPTKPKLRCEKCDKEFAHP 327
KL C++ E +P
Sbjct: 220 HREISGKLACKRKYTEDYNP 239
Score = 33.5 bits (73), Expect = 0.28
Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 11/142 (7%)
Query: 272 LREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLRCEKCDKEFAHPHYLT 331
LR ++Q SS KC++C K F L H++I P K KL +EF+ +
Sbjct: 33 LRSNLQSKSSH----KCKICGKSFECYQALGGHQRIHRPIKEKL----SKQEFSEVY--- 81
Query: 332 RHKNAVHMEIDESNYEHECEXXXXXXXXXXYLSNHLQRHEQQQMKRISRMVKTVIGEGGE 391
K+ + + S+ +EC+ L H + H + + S + + + E
Sbjct: 82 PRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSE 141
Query: 392 PNVVKKRGRPRKQRVEIEFIKC 413
+ + K E +F+ C
Sbjct: 142 AKKIVSQPSSFKVSQEEKFLHC 163
>At2g13950.1 68415.m01550 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 517
Score = 35.1 bits (77), Expect = 0.091
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 259 CPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAI-RLKKHKKIVHPT-KPKLR 316
C E E K+ Y + +Q++SS + V C CD F I HK +HP K
Sbjct: 59 CVESPLEIKHPSYPFQSLQLYSSPFALVNCICCDISFQDIIYHSSNHKLSMHPVCAMKPV 118
Query: 317 CEKCDKEFAHPHYLT 331
D HPH LT
Sbjct: 119 PIFIDHTKRHPHPLT 133
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 108 VLCDICDKTFKNKHYLYMHKINKHYSEIEKCYCQFCLHEFKTRKALQMHVKKIHPNTLPE 167
V C CD+ F ++ L H+ KH+ C C + T + +HV ++H + +
Sbjct: 12 VWCYYCDREFDDEKILVQHQKAKHFK------CHVCHKKLSTASGMVIHVLQVHKENVTK 65
Query: 168 LKCVECGKE 176
+ + G++
Sbjct: 66 VPNAKDGRD 74
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 282 ADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLRCEKCDKEFAHPHYLTRHKNAVHME 340
A KV C CD+ F L +H+K H +C C K+ + + H VH E
Sbjct: 8 ATEKVWCYYCDREFDDEKILVQHQKAKH-----FKCHVCHKKLSTASGMVIHVLQVHKE 61
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Query: 196 EKFICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLES 255
EK C C + F + L +H + +H C C + M HVL +H +
Sbjct: 10 EKVWCYYCDREFDDEKILVQHQKAKH-----FKCHVCHKKLSTASGMVIHVLQVHKENVT 64
Query: 256 KV 257
KV
Sbjct: 65 KV 66
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 34.3 bits (75), Expect = 0.16
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 12/116 (10%)
Query: 77 RYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEIE 136
RYIC CN+ F+ QNL +H R H + D + K + Y+ H++
Sbjct: 66 RYICEICNQGFQRDQNLQMHRRR-HKVPWKLLKRD-NNIEVKKRVYVCPEPTCLHHN--- 120
Query: 137 KCYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCIT 192
C H ++ H ++ H N + C C K + V + H+++C T
Sbjct: 121 PC------HALGDLVGIKKHFRRKHSNH-KQWVCERCSKGYAVQSDYKAHLKTCGT 169
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 34.3 bits (75), Expect = 0.16
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 22/112 (19%)
Query: 197 KFICQLCQKPFKNHLNLKRHMQTQHTP----------VERHPCVFCPMTFKSRHH----- 241
+FIC++C K F+ NL+ H + + P V R CP HH
Sbjct: 91 RFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHPSRAL 150
Query: 242 -----MKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQVHSSADSKVKC 288
+K+H H E K C +C K++ + H + + + K C
Sbjct: 151 GDLTGIKKHFFRKHG--EKKWKCEKCSKKYAVQSDWKAHAKTCGTKEYKCDC 200
Score = 31.1 bits (67), Expect = 1.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 77 RYICHKCNKEFKNYQNLYLH 96
R+IC CNK F+ QNL LH
Sbjct: 91 RFICEVCNKGFQRDQNLQLH 110
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 33.9 bits (74), Expect = 0.21
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 148 KTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCITSNREKFICQLCQKPF 207
K + LQ H K+ H + C +CGK F V R H ++C + + C +C F
Sbjct: 283 KDFRTLQTHYKRKHG--IKPFMCRKCGKAFAVRGDWRTHEKNC----GKLWYC-ICGSDF 335
Query: 208 KNHLNLKRHMQ 218
K+ +LK H++
Sbjct: 336 KHKRSLKDHIK 346
Score = 29.9 bits (64), Expect = 3.4
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 79 ICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEIEKC 138
I H K K+++ L H R H + +C C K F + H+ K+ ++ C
Sbjct: 274 IDHPRAKPLKDFRTLQTHYKRKHGIKP--FMCRKCGKAFAVRGDWRTHE--KNCGKLWYC 329
Query: 139 YCQFCLHEFKTRKALQMHVK 158
C +FK +++L+ H+K
Sbjct: 330 ICG---SDFKHKRSLKDHIK 346
>At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 402
Score = 33.5 bits (73), Expect = 0.28
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 302 KKHKKIVHPTKPKL-RCEKCDKEFAHPHYLTRHKNAVHMEIDESNYEHECEXXXXXXXXX 360
KK ++ P K L RCE+C K F + Y H++ +H+ S E CE
Sbjct: 50 KKTQESPEPMKKILFRCEECGKGFRYEKYFKNHRSMMHL----SPNEKVCEESLMT---- 101
Query: 361 XYLSNHLQRHEQQQMKRISRMVKTVIGEGGEPNVV 395
LS L ++++ R+ R KT+ EP+ +
Sbjct: 102 --LSRSLGFVKKKKRSRLGRSGKTLFTTFLEPSSI 134
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 239 RHHMKRHVLNIHPPLESKV-NCPECQKEFKNDQYLREH-MQVHSSADSKVKCE 289
R + K+ P++ + C EC K F+ ++Y + H +H S + KV CE
Sbjct: 45 RENSKKKTQESPEPMKKILFRCEECGKGFRYEKYFKNHRSMMHLSPNEKV-CE 96
>At5g02340.1 68418.m00157 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 631
Score = 33.5 bits (73), Expect = 0.28
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 259 CPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAI-RLKKHKKIVHPT-KPKLR 316
C E E K+ Y + +Q++SS + V C CD F I +K +HP K
Sbjct: 137 CVESPLEIKHPSYPFQSLQLYSSPFALVNCICCDISFQDMIYHSSTYKLSMHPVCAMKPV 196
Query: 317 CEKCDKEFAHPHYLT 331
D HPH LT
Sbjct: 197 PSFIDHTKRHPHPLT 211
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 33.5 bits (73), Expect = 0.28
Identities = 39/147 (26%), Positives = 57/147 (38%), Gaps = 36/147 (24%)
Query: 110 CDICDKTFKNKHYLYMHKINKHYSEIEK------------------CYC--QFCLHEF-- 147
C IC KTF + + MH H SE K CYC + C +
Sbjct: 182 CSICSKTFNRYNNMQMHMWG-HGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNINH 240
Query: 148 ------KTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCITSNREKFICQ 201
K + LQ H K+ H + C +CGK V R H ++C + + C
Sbjct: 241 PRSKPLKDFRTLQTHYKRKHGSK--PFSCGKCGKALAVKGDWRTHEKNC----GKLWYC- 293
Query: 202 LCQKPFKNHLNLKRHMQTQHTPVERHP 228
C FK+ +LK H+++ + HP
Sbjct: 294 TCGSDFKHKRSLKDHIRSFGSGHSPHP 320
Score = 32.3 bits (70), Expect = 0.64
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 173 CGKEFQVPYKLRYHMESCITSNREKFICQLCQKPFKNHLNLKRHM 217
CGK F +P + H+ +F C +C K F + N++ HM
Sbjct: 161 CGKRFWIPSPAQIHVGPM------QFACSICSKTFNRYNNMQMHM 199
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 33.1 bits (72), Expect = 0.37
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 18/147 (12%)
Query: 78 YICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEIEK 137
+ C C K FK NL +H R H +E + T ++K Y + KHY +
Sbjct: 217 HYCQICGKGFKRDANLRMH-MRAHG-DEYKTREALISPTSQDKKGGY--SLKKHYYSCPQ 272
Query: 138 CYCQF-CLHE-FKTRKAL---QMHVKKIHPNTLPEL-KCVECG-KEFQVPYKLRYHMESC 190
C++ HE F+ K++ + H K+ H P++ C C K F V LR H + C
Sbjct: 273 HGCRWNQRHEKFQPLKSVICAKNHYKRSH---CPKMYMCRRCSVKHFSVLSDLRTHEKHC 329
Query: 191 ITSNREKFICQLCQKPFKNHLNLKRHM 217
K++C C F L H+
Sbjct: 330 ---GDIKWVCS-CGTKFSRKDKLMSHV 352
Score = 32.3 bits (70), Expect = 0.64
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
Query: 200 CQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMT--FKSRHHMKRHVLNIHPPLESKV 257
CQ+C K FK NL+ HM+ + + P + K + +K+H + P +
Sbjct: 219 CQICGKGFKRDANLRMHMRAHGDEYKTREALISPTSQDKKGGYSLKKHYYSC-PQHGCRW 277
Query: 258 N-CPECQKEFKNDQYLREHMQVHSSADSKVKCELCD-KYFHSAIRLKKHKKIVHPTKPKL 315
N E + K+ + H + S C C K+F L+ H+K H K
Sbjct: 278 NQRHEKFQPLKSVICAKNHYK-RSHCPKMYMCRRCSVKHFSVLSDLRTHEK--HCGDIKW 334
Query: 316 RCEKCDKEFAHPHYLTRH 333
C C +F+ L H
Sbjct: 335 VC-SCGTKFSRKDKLMSH 351
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 33.1 bits (72), Expect = 0.37
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 23/121 (19%)
Query: 77 RYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEIE 136
R++C CNK F+ QNL LH R H+ +K K I K ++
Sbjct: 81 RFVCEICNKGFQRDQNLQLH-RRGHNL------------PWKLKQRSKQEVIKK---KVY 124
Query: 137 KCYCQFCLHEFKTR-----KALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCI 191
C + C+H +R ++ H + H + KC +C K++ V + H ++C
Sbjct: 125 ICPIKTCVHHDASRALGDLTGIKKHYSRKHGE--KKWKCEKCSKKYAVQSDWKAHAKTCG 182
Query: 192 T 192
T
Sbjct: 183 T 183
Score = 30.3 bits (65), Expect = 2.6
Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 22/112 (19%)
Query: 197 KFICQLCQKPFKNHLNLKRHMQTQHTP----------VERHPCVFCPMTFKSRHH----- 241
+F+C++C K F+ NL+ H + + P V + CP+ H
Sbjct: 81 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRAL 140
Query: 242 -----MKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQVHSSADSKVKC 288
+K+H H E K C +C K++ + H + + + K C
Sbjct: 141 GDLTGIKKHYSRKHG--EKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDC 190
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 33.1 bits (72), Expect = 0.37
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 197 KFICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESK 256
+F+C++C K F+ NL+ H + + P + + KS +K+ V + P +
Sbjct: 62 RFVCEICNKGFQRDQNLQLHRRGHNLPWK--------LRQKSNKEVKKKVY-VCPEVSCV 112
Query: 257 VNCPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLR 316
+ P + + +++H + K KC+ C K + K H KI + K
Sbjct: 113 HHDP--SRALGDLTGIKKHF-CRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYKCD 169
Query: 317 C 317
C
Sbjct: 170 C 170
Score = 30.3 bits (65), Expect = 2.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 77 RYICHKCNKEFKNYQNLYLH 96
R++C CNK F+ QNL LH
Sbjct: 62 RFVCEICNKGFQRDQNLQLH 81
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 282 ADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLRCEKCDKEFAHPHYLTRHKNAVH 338
A ++ CE+C+K F L+ H++ H KLR +K +KE Y+ + VH
Sbjct: 59 ATNRFVCEICNKGFQRDQNLQLHRR-GHNLPWKLR-QKSNKEVKKKVYVCPEVSCVH 113
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 33.1 bits (72), Expect = 0.37
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Query: 77 RYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEIE 136
RY+C CN+ F+ QNL +H R H +L ++ + + Y+ H++
Sbjct: 69 RYVCEICNQGFQRDQNLQMHRRR-HKV-PWKLLKRETNEEVRKRVYVCPEPTCLHHN--- 123
Query: 137 KCYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCIT 192
C H ++ H ++ H N + C C K + V + H+++C T
Sbjct: 124 PC------HALGDLVGIKKHFRRKHSNH-KQWICERCSKGYAVQSDYKAHLKTCGT 172
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 32.7 bits (71), Expect = 0.48
Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 21/111 (18%)
Query: 197 KFICQLCQKPFKNHLNLKRHMQTQHTPVE---------RHPCVFCPMTFKSRHH------ 241
+F+C++C K F+ NL+ H + + P + R CP++ H
Sbjct: 60 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPSRALG 119
Query: 242 ----MKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQVHSSADSKVKC 288
+K+H H E K C +C K++ + H ++ + + K C
Sbjct: 120 DLTGIKKHFCRKHG--EKKWKCEKCSKKYAVQSDWKAHSKICGTKEYKCDC 168
Score = 30.3 bits (65), Expect = 2.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 77 RYICHKCNKEFKNYQNLYLH 96
R++C CNK F+ QNL LH
Sbjct: 60 RFVCEICNKGFQRDQNLQLH 79
>At5g54360.1 68418.m06769 zinc finger (C2H2 type) family
protein-related contains Prosite:PS00028: Zinc finger,
C2H2 type, domain.
Length = 270
Score = 32.7 bits (71), Expect = 0.48
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 243 KRHVLNIHPPLESKVN--CPECQKEFKNDQYLREHMQVH 279
KR + IHPP ++K++ C C++ FK+ L HM+ H
Sbjct: 65 KRDTVLIHPPKDNKISHTCRFCKRNFKSCFALGGHMKCH 103
>At3g25910.1 68416.m03230 expressed protein
Length = 372
Score = 32.7 bits (71), Expect = 0.48
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 256 KVNCPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHP 310
K+ CP C+ K ++ +S CE CD + S L+KH +++HP
Sbjct: 173 KLTCPLCRGHIKEWVVVKAARCFMNSKHRSCSCETCD-FSGSYSDLRKHARLLHP 226
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 32.7 bits (71), Expect = 0.48
Identities = 43/157 (27%), Positives = 58/157 (36%), Gaps = 26/157 (16%)
Query: 200 CQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESKVNC 259
C +C K FK NL+ HM+ + + P K V P L + +C
Sbjct: 246 CTICGKGFKRDANLRMHMRGHGDEYKTAAALAKP--------NKESVPGSEPMLIKRYSC 297
Query: 260 P--ECQ--KEFKNDQYLREHMQV-----HSSADSKVKCELC-DKYFHSAIRLKKHKKIVH 309
P C+ KE K Q L+ + V + D C C K F LK H+K H
Sbjct: 298 PFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEK--H 355
Query: 310 PTKPKLRC------EKCDKEFAHPHYLTRHKNAVHME 340
K K C + DK F H H A+ +E
Sbjct: 356 CGKNKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLE 392
Score = 31.9 bits (69), Expect = 0.85
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 19/209 (9%)
Query: 24 ESTLPQPHALKKPKDEVVKFISVNSDALTEEQRAM----YQSVLSTWKPIMFPKSEKRYI 79
E LP+P + + + VV+ + + EE + Y+ + + I+ P + +
Sbjct: 189 EFDLPKPVLVDEREGHVVEEHEMKDEDDVEEGENLPPGSYEILQLEKEEILAPHT---HF 245
Query: 80 CHKCNKEFKNYQNLYLHTTRVHSTE--EAAVLCDICDKTFKNKHYLYMHKINKHYSEIEK 137
C C K FK NL +H R H E AA L ++ + + + + + ++
Sbjct: 246 CTICGKGFKRDANLRMH-MRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLGCKR 304
Query: 138 CYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVEC-GKEFQVPYKLRYHMESCITSNRE 196
KT ++ H K+ H + C C K+F V L+ H + C +
Sbjct: 305 NKEHKKFQPLKTILCVKNHYKRTHCD--KSFTCSRCHTKKFSVIADLKTHEKHC---GKN 359
Query: 197 KFICQLCQKPFKNHLNLKRHMQ--TQHTP 223
K++C C F L H+ HTP
Sbjct: 360 KWLCS-CGTTFSRKDKLFGHIALFQGHTP 387
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 32.7 bits (71), Expect = 0.48
Identities = 43/157 (27%), Positives = 58/157 (36%), Gaps = 26/157 (16%)
Query: 200 CQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESKVNC 259
C +C K FK NL+ HM+ + + P K V P L + +C
Sbjct: 246 CTICGKGFKRDANLRMHMRGHGDEYKTAAALAKP--------NKESVPGSEPMLIKRYSC 297
Query: 260 P--ECQ--KEFKNDQYLREHMQV-----HSSADSKVKCELC-DKYFHSAIRLKKHKKIVH 309
P C+ KE K Q L+ + V + D C C K F LK H+K H
Sbjct: 298 PFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEK--H 355
Query: 310 PTKPKLRC------EKCDKEFAHPHYLTRHKNAVHME 340
K K C + DK F H H A+ +E
Sbjct: 356 CGKNKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLE 392
Score = 31.9 bits (69), Expect = 0.85
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 19/209 (9%)
Query: 24 ESTLPQPHALKKPKDEVVKFISVNSDALTEEQRAM----YQSVLSTWKPIMFPKSEKRYI 79
E LP+P + + + VV+ + + EE + Y+ + + I+ P + +
Sbjct: 189 EFDLPKPVLVDEREGHVVEEHEMKDEDDVEEGENLPPGSYEILQLEKEEILAPHT---HF 245
Query: 80 CHKCNKEFKNYQNLYLHTTRVHSTE--EAAVLCDICDKTFKNKHYLYMHKINKHYSEIEK 137
C C K FK NL +H R H E AA L ++ + + + + + ++
Sbjct: 246 CTICGKGFKRDANLRMH-MRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLGCKR 304
Query: 138 CYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVEC-GKEFQVPYKLRYHMESCITSNRE 196
KT ++ H K+ H + C C K+F V L+ H + C +
Sbjct: 305 NKEHKKFQPLKTILCVKNHYKRTHCD--KSFTCSRCHTKKFSVIADLKTHEKHC---GKN 359
Query: 197 KFICQLCQKPFKNHLNLKRHMQ--TQHTP 223
K++C C F L H+ HTP
Sbjct: 360 KWLCS-CGTTFSRKDKLFGHIALFQGHTP 387
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 32.3 bits (70), Expect = 0.64
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 113 CDKTFKNKHYLYMHKINKHYSEIEKCYCQFCLHEFKTRKALQMHVKKIHPNTLP-ELKCV 171
C TF++K L HK N +C + C +F+ K L +H +++H + P E
Sbjct: 1222 CKMTFESKAKLQTHKRN-------RCTHEGCGKKFRAHKYLVLH-QRVHKDERPFECSWK 1273
Query: 172 ECGKEFQVPYKLRYHMESCITSNREKFICQL--CQKPFKNHLNLKRH-MQTQH 221
C F+ + H+ + + +IC++ C F+ + RH +T H
Sbjct: 1274 GCSMTFKWQWARTEHLR--LHTGERPYICKVDGCGLSFRFVSDYSRHRRKTMH 1324
Score = 31.5 bits (68), Expect = 1.1
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 15/122 (12%)
Query: 220 QHTPVERHP--CVF--CPMTFKSRHHMKRHVLNIHPPLESKVNCPECQKEFKNDQYLREH 275
Q P HP C C MTF+S+ ++ H N + C K+F+ +YL H
Sbjct: 1206 QEVPTTTHPNRCYLEGCKMTFESKAKLQTHKRN-------RCTHEGCGKKFRAHKYLVLH 1258
Query: 276 MQVHSSADSKVKCEL--CDKYFHSAIRLKKHKKIVHPTKPKL-RCEKCDKEFAHPHYLTR 332
+VH + +C C F +H ++ +P + + + C F +R
Sbjct: 1259 QRVHKD-ERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSR 1317
Query: 333 HK 334
H+
Sbjct: 1318 HR 1319
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 32.3 bits (70), Expect = 0.64
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 76 KRYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEI 135
K I H + K+++ L H R H A C C K F K H+ K+ ++
Sbjct: 310 KNNIDHPRARPLKDFRTLQTHYKRKHGVRPFA--CRRCGKAFAVKGDWRTHE--KNCGKL 365
Query: 136 EKCYCQFCLHEFKTRKALQMHVKKIHPNTLP 166
YC C +FK +++L+ HVK +P
Sbjct: 366 --WYCS-CGSDFKHKRSLKDHVKAFGNGHVP 393
Score = 32.3 bits (70), Expect = 0.64
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 148 KTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCITSNREKFICQLCQKPF 207
K + LQ H K+ H + C CGK F V R H ++C + + C C F
Sbjct: 322 KDFRTLQTHYKRKHG--VRPFACRRCGKAFAVKGDWRTHEKNC----GKLWYCS-CGSDF 374
Query: 208 KNHLNLKRHMQ 218
K+ +LK H++
Sbjct: 375 KHKRSLKDHVK 385
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 32.3 bits (70), Expect = 0.64
Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 14/116 (12%)
Query: 77 RYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEIE 136
R+IC CNK F+ QNL LH R H+ L K K K YL H+
Sbjct: 82 RFICDVCNKGFQREQNLQLH-RRGHNLPWK--LKQKSTKEVKRKVYLCPEPTCVHHDPSR 138
Query: 137 KCYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCIT 192
L + ++ H + H + KC +C K + V + H ++C T
Sbjct: 139 ------ALGDL---TGIKKHYYRKHGE--KKWKCEKCSKRYAVQSDWKAHSKTCGT 183
Score = 29.9 bits (64), Expect = 3.4
Identities = 35/140 (25%), Positives = 53/140 (37%), Gaps = 19/140 (13%)
Query: 197 KFICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESK 256
+FIC +C K F+ NL+ H + + P + + KS +KR V P
Sbjct: 82 RFICDVCNKGFQREQNLQLHRRGHNLPWK--------LKQKSTKEVKRKVYLCPEPTCVH 133
Query: 257 VNCPECQKEFK--NDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPK 314
+ + Y R+H + K KCE C K + K H K TK +
Sbjct: 134 HDPSRALGDLTGIKKHYYRKH------GEKKWKCEKCSKRYAVQSDWKAHSKTC-GTK-E 185
Query: 315 LRCEKCDKEFAHPHYLTRHK 334
RC+ C F+ H+
Sbjct: 186 YRCD-CGTIFSRRDSYITHR 204
>At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 214
Score = 31.9 bits (69), Expect = 0.85
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 240 HHMKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQVHSSADSKVK 287
+H K + + P C C++EF++ Q L HM VH +K++
Sbjct: 32 NHYKNYEAGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLR 79
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 31.9 bits (69), Expect = 0.85
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 19/100 (19%)
Query: 272 LREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLRCEKCDKEFAHPHYLT 331
L +H + H+S ++ +C+ C+K F S L H+ KPKL E+
Sbjct: 35 LNQHTESHTS--NQFECKTCNKRFSSFQALGGHR--ASHKKPKLTVEQ------------ 78
Query: 332 RHKNAVHMEID-ESNYEHECEXXXXXXXXXXYLSNHLQRH 370
K+ H+ D + N+ H+C L H++RH
Sbjct: 79 --KDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRH 116
>At2g23070.1 68415.m02750 casein kinase II alpha chain, putative
similar to casein kinase II, alpha chain (CK II) [Zea
mays] SWISS-PROT:P28523; contains protein kinase domain,
Pfam:PF00069
Length = 432
Score = 31.9 bits (69), Expect = 0.85
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 362 YLSNHLQRHEQQQMKRISRMVKTVIGEGGEPNVVKKRGRPRKQRV 406
+L N Q+H+QQQ R+ +T+ + G+ +++ G P K RV
Sbjct: 62 HLRNQQQQHQQQQQSRVKEKSETLAQKIGKS--IRRAGAPSKARV 104
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 31.9 bits (69), Expect = 0.85
Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 14/116 (12%)
Query: 77 RYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEIE 136
R+IC CNK F+ QNL LH R H+ L K K K YL H+
Sbjct: 80 RFICEVCNKGFQREQNLQLH-RRGHNLPWK--LKQKSTKEVKRKVYLCPEPSCVHHDPSR 136
Query: 137 KCYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCIT 192
L + ++ H + H + KC +C K + V + H ++C T
Sbjct: 137 ------ALGDL---TGIKKHYYRKHGE--KKWKCDKCSKRYAVQSDWKAHSKTCGT 181
Score = 30.7 bits (66), Expect = 2.0
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 15/138 (10%)
Query: 197 KFICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESK 256
+FIC++C K F+ NL+ H + + P + + KS +KR V P S
Sbjct: 80 RFICEVCNKGFQREQNLQLHRRGHNLPWK--------LKQKSTKEVKRKVYLCPEP--SC 129
Query: 257 VNCPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLR 316
V+ + + + +++H + K KC+ C K + K H K TK + R
Sbjct: 130 VH-HDPSRALGDLTGIKKH-YYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC-GTK-EYR 185
Query: 317 CEKCDKEFAHPHYLTRHK 334
C+ C F+ H+
Sbjct: 186 CD-CGTLFSRRDSFITHR 202
>At4g16845.1 68417.m02543 vernalization 2 protein (VRN2) identical
to vernalization 2 protein [Arabidopsis thaliana]
gi|16945788|gb|AAL32135
Length = 440
Score = 31.5 bits (68), Expect = 1.1
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 136 EKCYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCITSNR 195
E C C FC + K LQ H+ H E K +E + V KL + S+
Sbjct: 86 EDCSCPFCSMLCGSFKGLQFHLNSSHDLFEFEFKLLEEYQTVNVSVKLNSFIFEEEGSDD 145
Query: 196 EKF-ICQLCQKPFK 208
+KF LC KP K
Sbjct: 146 DKFEPFSLCSKPRK 159
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 31.5 bits (68), Expect = 1.1
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 192 TSNREKFICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHP 251
+ +R +F C+ C K FK++ L H + H + C MT K+ +VL +
Sbjct: 188 SKSRGRFKCETCGKVFKSYQALGGH-RASHK--KNKAC----MT-KTEQVETEYVLGVK- 238
Query: 252 PLESKVN-CPECQKEFKNDQYLREHMQVHSS 281
E KV+ CP C + F + Q L H + H S
Sbjct: 239 --EKKVHECPICFRVFTSGQALGGHKRSHGS 267
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 31.1 bits (67), Expect = 1.5
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 14/116 (12%)
Query: 77 RYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEIE 136
R++C CNK F+ QNL LH R H+ L +K + K YL H+
Sbjct: 81 RFLCEVCNKGFQREQNLQLH-RRGHNLPWK--LKQKSNKEVRRKVYLCPEPSCVHHDPAR 137
Query: 137 KCYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHMESCIT 192
L + ++ H + H + KC +C K + V + H ++C T
Sbjct: 138 ------ALGDL---TGIKKHYYRKHGE--KKWKCDKCSKRYAVQSDWKAHSKTCGT 182
Score = 29.5 bits (63), Expect = 4.5
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 282 ADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLRCEKCDKEFAHPHYLTRHKNAVH 338
A ++ CE+C+K F L+ H++ H KL+ +K +KE YL + VH
Sbjct: 78 ATNRFLCEVCNKGFQREQNLQLHRR-GHNLPWKLK-QKSNKEVRRKVYLCPEPSCVH 132
Score = 29.5 bits (63), Expect = 4.5
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 15/148 (10%)
Query: 197 KFICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESK 256
+F+C++C K F+ NL+ H + + P + + KS ++R V P S
Sbjct: 81 RFLCEVCNKGFQREQNLQLHRRGHNLPWK--------LKQKSNKEVRRKVYLCPEP--SC 130
Query: 257 VNCPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKIVHPTKPKLR 316
V+ + + + +++H + K KC+ C K + K H K TK + R
Sbjct: 131 VH-HDPARALGDLTGIKKH-YYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC-GTK-EYR 186
Query: 317 CEKCDKEFAHPHYLTRHKNAVHMEIDES 344
C+ C F+ H+ I ES
Sbjct: 187 CD-CGTIFSRRDSYITHRAFCDALIQES 213
>At3g28650.1 68416.m03576 DC1 domain-containing protein similar to
hypothetical protein GI:4204272 from [Arabidopsis
thaliana] contains weak PHD zinc finger motifs contains
weak PHD zinc finger motifs DC1 domain, a divergent
protein kinase C domain of unknown function.
Length = 665
Score = 30.7 bits (66), Expect = 2.0
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 10/84 (11%)
Query: 110 CDICDKTFKNKHYLYMHKINKHYSEIEKCYCQFCLHEFKTRKALQMHVKKIHPNTLP--- 166
CD+CD+++ + Y K H KC F L + + H K+ P
Sbjct: 23 CDVCDRSYGDGFYCSECKFTVH----RKCAVVFLLKDIFDHPSHVGHYLKLLTTGAPDHT 78
Query: 167 ELKCVECGKEFQVPYKLRYHMESC 190
+ KC CGK + ++ YH C
Sbjct: 79 DPKCHLCGKNTK---RILYHCSIC 99
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Query: 110 CDICDKTFKNKHYLYMHKINKHYSEIEKCYCQFCLHEFKTRKALQMHVKKIHPNTLPELK 169
CD+C + ++ + K+ H + K H F R L++ T P K
Sbjct: 139 CDVCYMFRRKGYFCFQCKLVVHKECVSKIESAVITHPFHARHPLKLLTDGAPDYTDP--K 196
Query: 170 CVECGKEFQVPYKLRYHMESCI 191
C CG E L YH + C+
Sbjct: 197 CHICGVE---TANLLYHCDMCM 215
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 298 AIRLKKHKKIVHPTKPK--LRCEKCDKEFAHPHYLTRHKNAVH 338
++RL+KH+ V K + L C+ CD+ + Y + K VH
Sbjct: 2 SLRLEKHEHYVDLVKQRDGLECDVCDRSYGDGFYCSECKFTVH 44
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 30.7 bits (66), Expect = 2.0
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 76 KRYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEI 135
+ +I H +K K+++ L H R H + + C +C K K H+ N
Sbjct: 199 RNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFS--CRLCGKLLAVKGDWRTHEKN-----C 251
Query: 136 EKCYCQFCLHEFKTRKALQMHVK 158
K + C +FK +++L+ HVK
Sbjct: 252 GKRWVCVCGSDFKHKRSLKDHVK 274
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 30.7 bits (66), Expect = 2.0
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 16/100 (16%)
Query: 109 LCDICDKTFKNKHYLYMH--------KINKHYS-EIEK----CYCQFCLHEFKTRKALQM 155
LC+IC K F+ L +H K+ + S E+ K C + C+H TR +
Sbjct: 71 LCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPTRALGDL 130
Query: 156 HVKKIH---PNTLPELKCVECGKEFQVPYKLRYHMESCIT 192
K H + + KC +C K + V + H ++C T
Sbjct: 131 TGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGT 170
Score = 29.9 bits (64), Expect = 3.4
Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 21/111 (18%)
Query: 197 KFICQLCQKPFKNHLNLKRHMQTQHTPVE---------RHPCVFCPMTFKSRHH------ 241
+F+C++C K F+ NL+ H + + P + R CP HH
Sbjct: 69 RFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPTRALG 128
Query: 242 ----MKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQVHSSADSKVKC 288
+K+H H E K C +C K + + H + + + + C
Sbjct: 129 DLTGIKKHFCRKHG--EKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDC 177
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 30.3 bits (65), Expect = 2.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 77 RYICHKCNKEFKNYQNLYLH 96
R++C CNK F+ QNL LH
Sbjct: 98 RFVCEICNKGFQRDQNLQLH 117
Score = 29.9 bits (64), Expect = 3.4
Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 22/112 (19%)
Query: 197 KFICQLCQKPFKNHLNLKRHMQTQHTP----------VERHPCVFCPMTFKSRHH----- 241
+F+C++C K F+ NL+ H + + P V R CP H
Sbjct: 98 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIRKKVYVCPEASCVHHDPSRAL 157
Query: 242 -----MKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQVHSSADSKVKC 288
+K+H H E K C +C K++ + H + + + + C
Sbjct: 158 GDLTGIKKHFCRKHG--EKKWKCDKCSKKYAVQSDCKAHSKTCGTKEYRCDC 207
>At3g01440.1 68416.m00068 oxygen evolving enhancer 3 (PsbQ) family
protein photosystem II oxygen-evolving complex protein;
contains Pfam profile PF05757: Oxygen evolving enhancer
protein 3 (PsbQ)
Length = 220
Score = 30.3 bits (65), Expect = 2.6
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 76 KRYICHKCNKEFKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEI 135
K+Y+ K F ++ NL ++E+ L D+ ++ F N L K+ +E
Sbjct: 146 KKYLRLKSTFLFYDFDNLI----SAAASEDKQPLTDLANRLFDNFEKLEDAAKTKNLAET 201
Query: 136 EKCY--CQFCLHEFKTRKA 152
E CY +F L E TR A
Sbjct: 202 ESCYKDTKFLLQEVMTRMA 220
>At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 286
Score = 30.3 bits (65), Expect = 2.6
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 251 PPLESKVNCPECQKEFKNDQYLREHMQVHS---------SADSKVKCELCDKYFHSAIRL 301
P + K C C+K+F + + H+++HS K+K + K ++
Sbjct: 43 PQPQRKHFCVICEKQFSSGKAYGGHVRIHSIEYNNKGKMKKMKKMKLKKKKKRKIGLVKK 102
Query: 302 KKHKKI---VHPTKPKLRCEKCDKEFAHPHYLTRH 333
+K K+I + K+RC C KEF H L H
Sbjct: 103 EKEKEIDLARTDVEGKIRCCLCGKEFQTMHSLFGH 137
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 30.3 bits (65), Expect = 2.6
Identities = 32/125 (25%), Positives = 48/125 (38%), Gaps = 15/125 (12%)
Query: 37 KDEVVKFISVNSDALTEEQRAMYQSVLSTWKPIMFPKSEKRYICHKCNKEFKNYQNLYLH 96
KDE + + Q V + M PKS+ Y C+ C +E +YQ L H
Sbjct: 711 KDETAALCPTPHSQTQPQSQTQLQKVTQP-QTQMLPKSDS-YQCNVCGRELPSYQALGGH 768
Query: 97 TTRVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEIEKCYCQFCLHEFKTRKALQMH 156
H T+ + + + K KI+K C C EF T ++L H
Sbjct: 769 KAS-HRTKPPVE--NATGEKMRPKKLAPSGKIHK---------CSICHREFSTGQSLGGH 816
Query: 157 VKKIH 161
K++H
Sbjct: 817 -KRLH 820
>At5g60040.1 68418.m07529 DNA-directed RNA polymerase, putative
similar to SP|P04051 DNA-directed RNA polymerase III
largest subunit (EC 2.7.7.6) {Saccharomyces cerevisiae};
contains InterPro accession IPR000722: RNA polymerase,
alpha subunit
Length = 1328
Score = 29.9 bits (64), Expect = 3.4
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 12/99 (12%)
Query: 87 FKNYQNLYLHTTRVHSTEEAAVLCDICDKTFKN--KHYLYMHKINKHYS--------EIE 136
FK Y+N L +++ +C C+ F+N HY Y+ Y+ +I
Sbjct: 54 FKPYENGLLDPRMGPPNKKS--ICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDIL 111
Query: 137 KCYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGK 175
KC C+ C + K + H++K+ + LK E K
Sbjct: 112 KCICKRCSNMLLDEKLYEDHLRKMRNPRMEPLKKTELAK 150
>At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 405
Score = 29.9 bits (64), Expect = 3.4
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 80 CHKCNKEFKNYQNLYLHTT----RVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEI 135
C+ CN EFK+ + LH R + + A + + + F+ + + NK +E
Sbjct: 6 CNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQSALAQEKNKS-NEA 64
Query: 136 EKCY-CQFCLHEFKTRKALQMHVK 158
Y C C +++ KA + H++
Sbjct: 65 PMLYTCAICAKGYRSSKAHEQHLQ 88
>At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 404
Score = 29.9 bits (64), Expect = 3.4
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 80 CHKCNKEFKNYQNLYLHTT----RVHSTEEAAVLCDICDKTFKNKHYLYMHKINKHYSEI 135
C+ CN EFK+ + LH R + + A + + + F+ + + NK +E
Sbjct: 6 CNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQSALAQEKNKS-NEA 64
Query: 136 EKCY-CQFCLHEFKTRKALQMHVK 158
Y C C +++ KA + H++
Sbjct: 65 PMLYTCAICAKGYRSSKAHEQHLQ 88
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 259 CPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKY 294
C C++EFK+ Q L HM VH +++K + D+Y
Sbjct: 41 CSFCRREFKSAQALGGHMNVHRRDRARLK-QADDQY 75
>At1g36950.1 68414.m04606 zinc finger protein-related contains
similarity to zinc finger proteins (C3HC4-type RING
finger)
Length = 226
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 245 HVLNIHPPLESKVNCPECQKEFKNDQYLREHMQVHS 280
H+ ++ P + +K CP CQK +D++ + QV +
Sbjct: 103 HINSVKPWILTKKQCPVCQKTAHDDEHQTQSYQVET 138
>At1g34095.1 68414.m04227 expressed protein ; expression supported
by MPSS
Length = 203
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 291 CDKYFHSAIRLKKHKKIVHPTKPKLRCEKCDKEF-AHPHYLTRHKNAVHMEIDESNYEHE 349
CD YF S K+H+ + PT +RC +K + +Y R ++ ++E+N E +
Sbjct: 115 CDDYFESDCWKKQHRDVSLPT--GVRCFVRNKPWHVVKNYKVRKAERANLSLEETNEESD 172
Query: 350 CE 351
E
Sbjct: 173 NE 174
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 77 RYICHKCNKEFKNYQNLYLH 96
R+ C CNK F+ QNL LH
Sbjct: 5 RFFCEICNKGFQREQNLQLH 24
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 29.5 bits (63), Expect = 4.5
Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 21/111 (18%)
Query: 197 KFICQLCQKPFKNHLNLKRHMQTQHTPVE---------RHPCVFCPMTFKSRHH------ 241
+F+C++C K F+ NL+ H + + P + R CP HH
Sbjct: 65 RFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSRALG 124
Query: 242 ----MKRHVLNIHPPLESKVNCPECQKEFKNDQYLREHMQVHSSADSKVKC 288
+K+H H E K C +C K + + H + + + + C
Sbjct: 125 DLTGIKKHFCRKHG--EKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDC 173
>At5g09740.1 68418.m01128 histone acetyltransferase, putative
similar to histone acetyltransferase [Homo sapiens]
gi|8317213|gb|AAF72665
Length = 445
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 124 YMHKINKHYSEIEKCY-CQFCLHEFKTRKALQMHVKK 159
Y Y++ K + C+FCL+ K ++ LQ H++K
Sbjct: 188 YFSPFPPEYNDCVKLFFCEFCLNFMKRKEQLQRHMRK 224
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 29.5 bits (63), Expect = 4.5
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 198 FICQLCQKPFKNHLNLKRHMQTQHTPVERHPCVFCPMTFKSRHHMKRHVLNIHPPLESKV 257
F+C+ C K F + L H++ HT V K R +R ++ + +V
Sbjct: 9 FLCKYCYKTFPSGKALGGHIRI-HT---NENSVGYNGNKKKRLVDQRKMMAQKHKQQQQV 64
Query: 258 NCPECQKEFKNDQYLREHMQVH 279
C EC + F + + LR HM H
Sbjct: 65 GCRECGRVFVSLKALRGHMACH 86
>At4g27240.1 68417.m03911 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 431
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 295 FHSAIRLKKHKKIVHPTKPKLRCEKCDKEF-----AHPHYLTRHKNAVHMEIDES 344
FH + R + ++ + C KC ++F A H+LT+H ME D S
Sbjct: 176 FHQSRRENDREAAINGDNSSVSCHKCGEKFSKLEAAEAHHLTKHAVTELMEGDSS 230
>At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 253 LESKVNCPECQKEFKNDQYLREHMQVH-SSADSKVKCELCDKYFHSA 298
+++K C C K F N + L HM+ H S+ S + +L D + S+
Sbjct: 1 MQNKHKCKLCSKSFCNGRALGGHMKSHLVSSQSSARKKLGDSVYSSS 47
>At3g13020.1 68416.m01622 hAT dimerisation domain-containing protein
contains Pfam profile: PF04937 domain of unknown
function (DUF659), weak hit to PF05699: hAT family
dimerisation domain
Length = 605
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 272 LREHMQVHSSADSKVKCELCDKYFHSAIRLKKH 304
+REH S+VKC C K +S RLK H
Sbjct: 8 VREHGICVDKKKSRVKCNYCGKEMNSFHRLKHH 40
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 297 SAIRLKKHKKIVHPTKPKLRCEKCDKEFAHPHYLTRHKNAVHMEI 341
+ + +++H V K +++C C KE H L H AV ++
Sbjct: 4 TVVDVREHGICVDKKKSRVKCNYCGKEMNSFHRLKHHLGAVGTDV 48
>At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 353
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 257 VNCPECQKEFKNDQYLREHMQVHSSADSKVKCELCDKYFHSAIRLKKHKKI 307
+ C EC K F ++ L H+QV S +S + C F R K+ K++
Sbjct: 78 IRCKECGKGFLYEKCLFNHLQVTHSEESTRRSLFC--RFSIVQRRKRSKRV 126
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 170 CVECGKEFQVPYKLRYHMESCITSNREKF-------ICQLCQKPFKNHLNLKRHMQTQH 221
C +CG +F L H+E N+++ +C C + F++ ++L H++ H
Sbjct: 215 CPQCGAKFSSVTSLVEHVEKTHERNKKQNHGNVTVDVCPRCSRGFRDPVDLVNHIERDH 273
>At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 395
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 134 EIEKCYCQFCLHEFKTRKALQMHVKKIHPNTLPELKCVECGKEFQVPYKLRYHME-SCIT 192
E++ C C + KT + +H+ K H +P+++ ++ K F L+ + C+
Sbjct: 167 ELDPACCLMCDKKHKTIEKCMVHMHKFHGFFIPDIEYLKDPKGFLTYLGLKVKRDFVCLY 226
Query: 193 SNREKFICQLCQKPFKNHLNLKRHMQTQ 220
N +LC PF + +++HM +
Sbjct: 227 CN------ELCH-PFSSLEAVRKHMDAK 247
>At5g64610.1 68418.m08119 histone acetyltransferase, putative
similar to histone acetyltransferase [Homo sapiens]
gi|8317213|gb|AAF72665
Length = 445
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 124 YMHKINKHYSEIEKCY-CQFCLHEFKTRKALQMHVKK 159
Y Y++ K + C+FCL K ++ LQ H++K
Sbjct: 188 YFSPFPPEYNDCVKLFFCEFCLSFMKRKEQLQRHMRK 224
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 258 NCPECQKEFKNDQYLREHMQVHSSADSKVK 287
+C C +EFK+ Q L HM VH +++K
Sbjct: 56 SCSFCGREFKSAQALGGHMNVHRRDRARLK 85
>At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 364
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 288 CELCDKYFHSAIRLKKHKKIVHPTKPKLRCEKCDKEFAH 326
C +CD+ F++ +L H K +H T+ + R + + H
Sbjct: 119 CGVCDRRFYTNEKLINHFKQIHETENQKRMRQIESSKGH 157
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 28.7 bits (61), Expect = 7.9
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 268 NDQYLREHMQVHSSADSKVK-CELCDKYFHSAIRLKKHKKIVHPTKPKLRCEKCDKEFAH 326
N +YL S + ++ CE C++ F +A L H I + KLR +E +
Sbjct: 2 NRKYLDRRSYSWSGSQARPYICEFCERGFSNAQALGGHMNIHRKDRAKLRQANLKEEDSE 61
Query: 327 PHYLTRHKNAVHMEIDE 343
T +N E+ E
Sbjct: 62 DAICTTSRNRFGQELIE 78
>At3g46810.1 68416.m05081 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 686
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 162 PNTLPELKCVECGKEFQVPYKLRYHMESCITSNREKFICQLCQ 204
P + + KC+ CG+EF+ +Y + C N IC CQ
Sbjct: 196 PPSYADHKCLLCGREFEDQQGQKYELYHCDVCNFS--ICISCQ 236
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.322 0.134 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,938,521
Number of Sequences: 28952
Number of extensions: 424064
Number of successful extensions: 1952
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1627
Number of HSP's gapped (non-prelim): 347
length of query: 429
length of database: 12,070,560
effective HSP length: 83
effective length of query: 346
effective length of database: 9,667,544
effective search space: 3344970224
effective search space used: 3344970224
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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