BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001719-TA|BGIBMGA001719-PA|IPR007087|Zinc finger, C2H2-type (287 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 43 2e-04 At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 42 5e-04 At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 38 0.006 At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 38 0.006 At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein ... 37 0.014 At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 37 0.014 At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 36 0.041 At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein ... 36 0.041 At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 35 0.055 At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 35 0.055 At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 35 0.055 At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein ... 34 0.096 At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein ... 34 0.096 At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 34 0.13 At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein ... 33 0.17 At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 33 0.29 At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 32 0.39 At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 32 0.39 At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 31 0.67 At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 31 0.67 At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein ... 31 0.89 At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein ... 31 0.89 At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein ... 31 1.2 At5g54360.1 68418.m06769 zinc finger (C2H2 type) family protein-... 30 1.6 At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 30 1.6 At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 30 1.6 At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 30 2.1 At3g18500.1 68416.m02351 nocturnin-related contains weak similar... 29 2.7 At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 29 2.7 At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein ... 29 2.7 At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 29 2.7 At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 29 2.7 At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 29 2.7 At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 29 2.7 At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 29 3.6 At5g06850.1 68418.m00774 C2 domain-containing protein contains I... 29 3.6 At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein ... 29 3.6 At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein ... 29 4.8 At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 29 4.8 At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 29 4.8 At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein ... 28 6.3 At1g31280.1 68414.m03828 PAZ domain-containing protein / piwi do... 28 6.3 At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein ... 28 6.3 At3g57290.1 68416.m06377 eukaryotic translation initiation facto... 28 8.3 At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 28 8.3 >At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3) identical to Cys2/His2-type zinc finger protein 3 [Arabidopsis thaliana] gi|6009889|dbj|BAA85109 Length = 193 Score = 43.2 bits (97), Expect = 2e-04 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 8/79 (10%) Query: 190 IHTGERP-FKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQVHTGVRRHA 248 + E+P +KC C TF +Y A+ H +L + + T T V+ H Sbjct: 67 VTVAEKPSYKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPS-------TAVKSHV 119 Query: 249 CSVCDKGFATSAEMKAHVR 267 CSVC K FAT + H R Sbjct: 120 CSVCGKSFATGQALGGHKR 138 >At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein (ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 178 Score = 41.9 bits (94), Expect = 5e-04 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 5/100 (5%) Query: 168 CLILVSAASTDSPVGPPQNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLVSTALVVVPS 227 CL++++ S +G Q H HT + F+CK C F ++ A+ H + Sbjct: 20 CLMILAQTSMVKQIGLNQ-HTESHTSNQ-FECKTCNKRFSSFQALGGHRASHKKPKL--- 74 Query: 228 SPRRTDPLLCRQVHTGVRRHACSVCDKGFATSAEMKAHVR 267 + + D + G H CS+C + F T + H+R Sbjct: 75 TVEQKDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMR 114 >At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type Length = 215 Score = 38.3 bits (85), Expect = 0.006 Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 7/107 (6%) Query: 168 CLILVSAASTDSPVGPPQNHVR--IHTGERPFKCKYCPNTFKTYPAMSRHHLVSTALVVV 225 CL++++ S+D P +H + ++ +KC C +F +Y A+ H V V Sbjct: 63 CLLMLARGSSDHHSPPSDHHSLSPLSDHQKDYKCSVCGKSFPSYQALGGHKTSHRKPVSV 122 Query: 226 PSSPRRTDPLLCRQVHTGV-----RRHACSVCDKGFATSAEMKAHVR 267 + + G+ + H CS+C K F + + H R Sbjct: 123 DVNNSNGTVTNNGNISNGLVGQSGKTHNCSICFKSFPSGQALGGHKR 169 >At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2) identical to Cys2/His2-type zinc finger protein 2 [Arabidopsis thaliana] gi|6009885|dbj|BAA85107 Length = 273 Score = 38.3 bits (85), Expect = 0.006 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 196 PFKCKYCPNTFKTYPAMSRH---HLVSTALVVVPSSPRRTDPLLC------RQVHTGVRR 246 P+KC C F +Y A+ H H + V+ ++ T P + + + Sbjct: 105 PYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPIAASGKI 164 Query: 247 HACSVCDKGFATSAEMKAHVR 267 H CS+C K F T + H R Sbjct: 165 HECSICHKVFPTGQALGGHKR 185 >At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 156 Score = 37.1 bits (82), Expect = 0.014 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 14/80 (17%) Query: 192 TGERPFKCKYCPNTFKTYPAMSRH---HLVSTALV-VVPSSPRRTDPLLCRQVHTGVRRH 247 T R F CK C F ++ A+ H H S AL P SP+R P+ +H Sbjct: 29 TKSRVFACKTCNKEFPSFQALGGHRASHRRSAALEGHAPPSPKRVKPV----------KH 78 Query: 248 ACSVCDKGFATSAEMKAHVR 267 C +C FA + H+R Sbjct: 79 ECPICGAEFAVGQALGGHMR 98 >At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein identical to C2H2 zinc finger protein ZAT1 [Arabidopsis thaliana] gi|1418321|emb|CAA67227; contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 267 Score = 37.1 bits (82), Expect = 0.014 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Query: 197 FKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQVHTGVRRHACSVCDKGF 256 F+C+ C FK+Y A+ H S + + +D L ++ + H C +C K F Sbjct: 160 FECETCEKVFKSYQALGGHR-ASHKKKIAETDQLGSDELKKKKKKSTSSHHECPICAKVF 218 Query: 257 ATSAEMKAHVRT 268 + + H R+ Sbjct: 219 TSGQALGGHKRS 230 Score = 27.9 bits (59), Expect = 8.3 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Query: 246 RHACSVCDKGFATSAEMKAHVRTVHMKI 273 RH C +C K FA + H+R+ HM I Sbjct: 4 RHKCKLCWKSFANGRALGGHMRS-HMLI 30 >At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1) identical to Cys2/His2-type zinc finger protein 1 [Arabidopsis thaliana] gi|6009887|dbj|BAA85108 Length = 245 Score = 35.5 bits (78), Expect = 0.041 Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 17/120 (14%) Query: 165 ALYCLILVSAASTDSPVGPPQNHVRIHTGERPFKCKYCPNTFKTYPAMSRH---HLVSTA 221 AL L+L ++ SP PP + R +KC C +F +Y A+ H H T Sbjct: 65 ALCLLMLARGSAVQSPPLPPLPSRASPSDHRDYKCTVCGKSFSSYQALGGHKTSHRKPTN 124 Query: 222 LVVVPSSPRRTD--------PLLCRQVHTG------VRRHACSVCDKGFATSAEMKAHVR 267 + + ++ ++ V+TG + H CS+C K FA+ + H R Sbjct: 125 TSITSGNQELSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSICFKSFASGQALGGHKR 184 >At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 238 Score = 35.5 bits (78), Expect = 0.041 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 9/80 (11%) Query: 197 FKCKYCPNTFKTYPAMSRH---HLVSTALVVVPSSPR-RTDPLLCRQVHTG-----VRRH 247 +KC C F +Y A+ H H S +L T + +G V+ H Sbjct: 89 YKCSVCDKAFSSYQALGGHKASHRKSFSLTQSAGGDELSTSSAITTSGISGGGGGSVKSH 148 Query: 248 ACSVCDKGFATSAEMKAHVR 267 CS+C K FAT + H R Sbjct: 149 VCSICHKSFATGQALGGHKR 168 Score = 27.9 bits (59), Expect = 8.3 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Query: 16 HVCEYCKFRFKERSNLSGHYRRHHKYKYICRACGITTRMRTKGTTYHTHVRSKH 69 HVC C F L GH R H++ K + G+T +HV S H Sbjct: 148 HVCSICHKSFATGQALGGHKRCHYEGKNGGGVSSSVSNSEDVGST--SHVSSGH 199 >At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein contains Pfam domians PF02375: jmjN domain, PF02373: jmjC domain and PF00096: Zinc finger, C2H2 type Length = 1327 Score = 35.1 bits (77), Expect = 0.055 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 28/89 (31%) Query: 131 HMVYHQRIHTGEKPYACS--ECPKRFRMPEQLQVSAALYCLILVSAASTDSPVGPPQNHV 188 ++V HQR+H E+P+ CS C F+ A T+ H+ Sbjct: 1254 YLVLHQRVHKDERPFECSWKGCSMTFKW----------------QWARTE--------HL 1289 Query: 189 RIHTGERPFKCKY--CPNTFKTYPAMSRH 215 R+HTGERP+ CK C +F+ SRH Sbjct: 1290 RLHTGERPYICKVDGCGLSFRFVSDYSRH 1318 Score = 29.5 bits (63), Expect = 2.7 Identities = 10/19 (52%), Positives = 13/19 (68%) Query: 129 QYHMVYHQRIHTGEKPYAC 147 Q+ H R+HTGE+PY C Sbjct: 1282 QWARTEHLRLHTGERPYIC 1300 >At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 288 Score = 35.1 bits (77), Expect = 0.055 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 1/84 (1%) Query: 186 NHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLV-STALVVVPSSPRRTDPLLCRQVHTGV 244 N + T + +KC+ C FK+Y A+ H V + +R++ V Sbjct: 162 NKINRATTKGRYKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAK 221 Query: 245 RRHACSVCDKGFATSAEMKAHVRT 268 R H C +C + FA+ + H R+ Sbjct: 222 RIHECPICLRVFASGQALGGHKRS 245 >At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) identical to salt-tolerance zinc finger protein GB:CAA64820 GI:1565227 from [Arabidopsis thaliana]; contains Pfam domain, PF00096: Zinc finger, C2H2 type; identical to cDNA zinc finger protein STZ/ZAT10 (STZ/ZAT10) GI:9965730 Length = 227 Score = 35.1 bits (77), Expect = 0.055 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 13/107 (12%) Query: 167 YCLILVSAASTDSPVGPPQNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHL-----VSTA 221 +CL+L++ + P PP ++ +KC C TF +Y A+ H +S Sbjct: 57 FCLMLLARDNRQPP--PPPAVEKLS-----YKCSVCDKTFSSYQALGGHKASHRKNLSQT 109 Query: 222 LVVVPSSPRRTDPLLCRQVHTGV-RRHACSVCDKGFATSAEMKAHVR 267 L + V TG + H C++C+K F + + H R Sbjct: 110 LSGGGDDHSTSSATTTSAVTTGSGKSHVCTICNKSFPSGQALGGHKR 156 Score = 27.9 bits (59), Expect = 8.3 Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 3/54 (5%) Query: 16 HVCEYCKFRFKERSNLSGHYRRHHKYKYICRACGITTRMRTKGTTYHTHVRSKH 69 HVC C F L GH R H++ ++ ++G +HV S H Sbjct: 136 HVCTICNKSFPSGQALGGHKRCHYEGNNNINTSSVS---NSEGAGSTSHVSSSH 186 >At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein contains zinc finger, C2H2 type, domain, PROSITE:PS00028 Length = 164 Score = 34.3 bits (75), Expect = 0.096 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 2/74 (2%) Query: 194 ERPFKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQVHTGVRRHACSVCD 253 +R F+CK C F ++ A+ H S ++ S P L ++ T H C +C Sbjct: 34 KRVFRCKTCLKEFSSFQALGGHR-ASHKKLINSSDPSLLGSLSNKKTKTAT-SHPCPICG 91 Query: 254 KGFATSAEMKAHVR 267 F + H+R Sbjct: 92 VEFPMGQALGGHMR 105 >At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein contains zinc finger, C2H2 type, domain, PROSITE:PS00028 Length = 170 Score = 34.3 bits (75), Expect = 0.096 Identities = 17/74 (22%), Positives = 27/74 (36%) Query: 194 ERPFKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQVHTGVRRHACSVCD 253 +R F+CK C F ++ A+ H + L P + T H C +C Sbjct: 33 KRVFRCKTCERDFDSFQALGGHRASHSKLTNSDDKSLPGSPKKKPKTTTTTTAHTCPICG 92 Query: 254 KGFATSAEMKAHVR 267 F + H+R Sbjct: 93 LEFPMGQALGGHMR 106 Score = 28.7 bits (61), Expect = 4.8 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 5/82 (6%) Query: 16 HVCEYCKFRFKERSNLSGHYRRHHKYKYICRACG--ITTRMRTKGTTYHTHVRSKHGSE- 72 H C C F L GH R+H K +A +T + TT T +S G Sbjct: 86 HTCPICGLEFPMGQALGGHMRKHRNEKEREKASNVLVTHSFMPETTTVTTLKKSSSGKRV 145 Query: 73 --LPWCRICGDAFISTKTHMER 92 L + ++F++T+ + R Sbjct: 146 ACLDFDLTSVESFVNTELELGR 167 >At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein contains Pfam domains PF02375: jmjN domain, PF02373: jmjC domain and PF00096: Zinc finger, C2H2 type Length = 1354 Score = 33.9 bits (74), Expect = 0.13 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Query: 187 HVRIHTGERPFKCKY--CPNTFKTYPAMSRH 215 H+R+HTG RP+ C C TF+ SRH Sbjct: 1310 HIRVHTGARPYVCAEPDCGQTFRFVSDFSRH 1340 Score = 31.1 bits (67), Expect = 0.89 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%) Query: 135 HQRIHTGEKPYACSE--CPKRFR 155 H R+HTG +PY C+E C + FR Sbjct: 1310 HIRVHTGARPYVCAEPDCGQTFR 1332 Score = 30.3 bits (65), Expect = 1.6 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%) Query: 187 HVRIHTGERPFKC--KYCPNTFKTYPAMSRHHLVST 220 H R+H+ +RP KC K C TFK + + H V T Sbjct: 1280 HQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHT 1315 >At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein (ZAT7) identical to zinc finger protein ZAT7 [Arabidopsis thaliana] gi|1418341|emb|CAA67234; contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 168 Score = 33.5 bits (73), Expect = 0.17 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Query: 194 ERPFKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQVHTGVRRHACSVCD 253 ER F+CK C F ++ A+ H S ++ +P L ++ T H C +C Sbjct: 37 ERVFRCKTCLKEFSSFQALGGHR-ASHKKLINSDNPSLLGSLSNKKTKTS---HPCPICG 92 Query: 254 KGFATSAEMKAHVR 267 F + H+R Sbjct: 93 VKFPMGQALGGHMR 106 Score = 28.3 bits (60), Expect = 6.3 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%) Query: 2 LLQSLAEVNPVNLEHVCEYCKFRFKERSNLSGHYRRHHKYK 42 LL SL+ H C C +F L GH RRH K Sbjct: 73 LLGSLSN-KKTKTSHPCPICGVKFPMGQALGGHMRRHRNEK 112 >At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 439 Score = 32.7 bits (71), Expect = 0.29 Identities = 11/31 (35%), Positives = 20/31 (64%) Query: 238 RQVHTGVRRHACSVCDKGFATSAEMKAHVRT 268 R+ H+ ++ C C KG+A ++ KAH++T Sbjct: 136 RRKHSNHKQWVCERCSKGYAVQSDYKAHLKT 166 Score = 28.7 bits (61), Expect = 4.8 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 8/80 (10%) Query: 16 HVCEYCKFRFKERSNLSGHYRRHH-KYKYICRACGITTRMRTKGTTYHTHVRSKHGSELP 74 ++CE C F+ NL H RRH +K + R I + R T + H Sbjct: 67 YICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLH--HNP--- 121 Query: 75 WCRICGDAFISTKTHMERLH 94 C GD + K H R H Sbjct: 122 -CHALGD-LVGIKKHFRRKH 139 >At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 419 Score = 32.3 bits (70), Expect = 0.39 Identities = 11/31 (35%), Positives = 20/31 (64%) Query: 238 RQVHTGVRRHACSVCDKGFATSAEMKAHVRT 268 R+ H+ ++ C C KG+A ++ KAH++T Sbjct: 139 RRKHSNHKQWICERCSKGYAVQSDYKAHLKT 169 Score = 28.7 bits (61), Expect = 4.8 Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 8/80 (10%) Query: 16 HVCEYCKFRFKERSNLSGHYRRHH-KYKYICRACGITTRMRTKGTTYHTHVRSKHGSELP 74 +VCE C F+ NL H RRH +K + R R R T + H Sbjct: 70 YVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLH--HNP--- 124 Query: 75 WCRICGDAFISTKTHMERLH 94 C GD + K H R H Sbjct: 125 -CHALGD-LVGIKKHFRRKH 142 >At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) identical to WIP5 protein [Arabidopsis thaliana] gi|18376498|emb|CAC86167; contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 337 Score = 32.3 bits (70), Expect = 0.39 Identities = 13/24 (54%), Positives = 16/24 (66%) Query: 60 TYHTHVRSKHGSELPWCRICGDAF 83 T TH + KHGS+ CR+CG AF Sbjct: 248 TLQTHYKRKHGSKPFACRMCGKAF 271 Score = 28.7 bits (61), Expect = 4.8 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Query: 26 KERSNLSGHYRRHHKYK-YICRACGITTRMRTKGTTYHTHVRSKHGSELPWCRICGDAF 83 K+ L HY+R H K + CR CG KG + TH K+ +L +C CG F Sbjct: 244 KDFRTLQTHYKRKHGSKPFACRMCG--KAFAVKG-DWRTH--EKNCGKLWYCS-CGSDF 296 >At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) identical to WIP2 protein [Arabidopsis thaliana] gi|18027012|gb|AAL55722; contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 383 Score = 31.5 bits (68), Expect = 0.67 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 7/59 (11%) Query: 26 KERSNLSGHYRRHHKYK-YICRACGITTRMRTKGTTYHTHVRSKHGSELPWCRICGDAF 83 K+ L HY+R H K ++CR CG +R + TH K+ +L +C ICG F Sbjct: 283 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVR---GDWRTH--EKNCGKLWYC-ICGSDF 335 >At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein contains zinc finger, C2H2 type, domain, PROSITE:PS00028 Length = 362 Score = 31.5 bits (68), Expect = 0.67 Identities = 11/31 (35%), Positives = 20/31 (64%) Query: 238 RQVHTGVRRHACSVCDKGFATSAEMKAHVRT 268 R+ H+ ++ C C KG+A ++ KAH++T Sbjct: 109 RRKHSVHKQWVCERCSKGYAVQSDYKAHLKT 139 Score = 27.9 bits (59), Expect = 8.3 Identities = 11/23 (47%), Positives = 13/23 (56%) Query: 16 HVCEYCKFRFKERSNLSGHYRRH 38 +VCE C F+ NL H RRH Sbjct: 39 YVCEICNQGFQRDQNLQMHRRRH 61 >At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type Length = 405 Score = 31.1 bits (67), Expect = 0.89 Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 6/90 (6%) Query: 18 CEYCKFRFKERSNLSGHYRRH-HKY---KYICRACGITTRM--RTKGTTYHTHVRSKHGS 71 C C FK+ + HY+ H+Y + + G+T + + +S Sbjct: 6 CNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQSALAQEKNKSNEAP 65 Query: 72 ELPWCRICGDAFISTKTHMERLHKETFDLK 101 L C IC + S+K H + L + L+ Sbjct: 66 MLYTCAICAKGYRSSKAHEQHLQSRSHVLR 95 >At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type Length = 404 Score = 31.1 bits (67), Expect = 0.89 Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 6/90 (6%) Query: 18 CEYCKFRFKERSNLSGHYRRH-HKY---KYICRACGITTRM--RTKGTTYHTHVRSKHGS 71 C C FK+ + HY+ H+Y + + G+T + + +S Sbjct: 6 CNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQSALAQEKNKSNEAP 65 Query: 72 ELPWCRICGDAFISTKTHMERLHKETFDLK 101 L C IC + S+K H + L + L+ Sbjct: 66 MLYTCAICAKGYRSSKAHEQHLQSRSHVLR 95 >At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein (ZFP6) identical to zinc finger protein, ZFP6 gi|790683|gb|AAA87302; contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 197 Score = 30.7 bits (66), Expect = 1.2 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 15 EHVCEYCKFRFKERSNLSGHYRRHHKYKYIC-RACGITTRMRTKGTTYHTH 64 ++ C+YC F L GH H K + + RA + TR + +H H Sbjct: 40 KYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPH 90 >At5g54360.1 68418.m06769 zinc finger (C2H2 type) family protein-related contains Prosite:PS00028: Zinc finger, C2H2 type, domain. Length = 270 Score = 30.3 bits (65), Expect = 1.6 Identities = 11/27 (40%), Positives = 14/27 (51%) Query: 14 LEHVCEYCKFRFKERSNLSGHYRRHHK 40 + H C +CK FK L GH + H K Sbjct: 79 ISHTCRFCKRNFKSCFALGGHMKCHKK 105 >At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 292 Score = 30.3 bits (65), Expect = 1.6 Identities = 15/52 (28%), Positives = 19/52 (36%), Gaps = 1/52 (1%) Query: 16 HVCEYCKFRFKERSNLSGHYRRHHKYKYICRACGITTRMRTKGTTYHTHVRS 67 H C CK F L GH RRH A + +++H H S Sbjct: 192 HECSICKAEFSSGQALGGHMRRHRGLTINANATS-AIKTAISSSSHHHHEES 242 >At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 284 Score = 30.3 bits (65), Expect = 1.6 Identities = 12/30 (40%), Positives = 13/30 (43%) Query: 9 VNPVNLEHVCEYCKFRFKERSNLSGHYRRH 38 +N N H C C F L GH RRH Sbjct: 181 INKANKVHECSICGSEFTSGQALGGHMRRH 210 >At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) identical to WIP3 protein [Arabidopsis thaliana] gi|18027014|gb|AAL55723; contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 337 Score = 29.9 bits (64), Expect = 2.1 Identities = 11/28 (39%), Positives = 16/28 (57%) Query: 239 QVHTGVRRHACSVCDKGFATSAEMKAHV 266 Q+H G + ACS+C K F M+ H+ Sbjct: 172 QIHVGPMQFACSICSKTFNRYNNMQMHM 199 Score = 29.1 bits (62), Expect = 3.6 Identities = 11/27 (40%), Positives = 12/27 (44%) Query: 189 RIHTGERPFKCKYCPNTFKTYPAMSRH 215 +IH G F C C TF Y M H Sbjct: 172 QIHVGPMQFACSICSKTFNRYNNMQMH 198 >At3g18500.1 68416.m02351 nocturnin-related contains weak similarity to Nocturnin (CCR4 protein homolog) (Swiss-Prot:O35710) [Mus musculus] Length = 262 Score = 29.5 bits (63), Expect = 2.7 Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 4/52 (7%) Query: 1 MLLQSLAEVNP--VNLEHVCEYCK-FRFKERSNLSGHYRRHHKYKYICRACG 49 ++ + L +NP ++++ V +Y F E++ +G Y++ +KYK +C G Sbjct: 143 LICEELIRLNPDIISMQEVDKYFDLFSMMEKAGYAGSYKKDYKYK-LCNGSG 193 >At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 314 Score = 29.5 bits (63), Expect = 2.7 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 1/72 (1%) Query: 197 FKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQVHTGVRRHACSVCDKGF 256 FKC+ C FK+Y A+ H + + + V + H C +C + F Sbjct: 194 FKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKE-KKVHECPICFRVF 252 Query: 257 ATSAEMKAHVRT 268 + + H R+ Sbjct: 253 TSGQALGGHKRS 264 Score = 28.3 bits (60), Expect = 6.3 Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 6/59 (10%) Query: 18 CEYCKFRFKERSNLSGHYRRHHKYKYICRACGITTRMRTKGTTYHTHVRSKHGSELPWC 76 CE C FK L GH H K K AC T+ T Y V+ K E P C Sbjct: 196 CETCGKVFKSYQALGGHRASHKKNK----AC--MTKTEQVETEYVLGVKEKKVHECPIC 248 >At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein weak similarity to S-locus protein 4 (GI:6069478) [Brassica rapa]; weak similarity to Pre-mRNA cleavage complex II protein Pcf11 (Fragment) (Swiss-Prot:O94913) [Homo sapiens]; contains Prosite PS00028: Zinc finger, C2H2 type, domain Length = 828 Score = 29.5 bits (63), Expect = 2.7 Identities = 11/30 (36%), Positives = 15/30 (50%) Query: 13 NLEHVCEYCKFRFKERSNLSGHYRRHHKYK 42 +L H+C C R K++ L H H K K Sbjct: 676 DLPHLCTSCSVRLKQKEELDRHMELHDKKK 705 >At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type Length = 917 Score = 29.5 bits (63), Expect = 2.7 Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 197 FKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQVHTGVRRHACSVCDKGF 256 ++C C +Y A+ H ++ P + + +++ + H CS+C + F Sbjct: 750 YQCNVCGRELPSYQALGGHK--ASHRTKPPVENATGEKMRPKKLAPSGKIHKCSICHREF 807 Query: 257 ATSAEMKAHVR 267 +T + H R Sbjct: 808 STGQSLGGHKR 818 Score = 29.1 bits (62), Expect = 3.6 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 4/74 (5%) Query: 197 FKCKYCPNTFKTYPAMSRH---HLVSTALVVVPSSPRRTDPLLCRQVHTGVRRHACSVCD 253 FKC C F +Y A+ H H + A + + + + + + H C +C Sbjct: 193 FKCSICEKVFTSYQALGGHKASHSIKAAQLENAGADAG-EKTRSKMLSPSGKIHKCDICH 251 Query: 254 KGFATSAEMKAHVR 267 F T + H R Sbjct: 252 VLFPTGQALGGHKR 265 Score = 28.3 bits (60), Expect = 6.3 Identities = 11/32 (34%), Positives = 16/32 (50%) Query: 9 VNPVNLEHVCEYCKFRFKERSNLSGHYRRHHK 40 ++P H C+ C F L GH RRH++ Sbjct: 238 LSPSGKIHKCDICHVLFPTGQALGGHKRRHYE 269 >At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 499 Score = 29.5 bits (63), Expect = 2.7 Identities = 9/21 (42%), Positives = 14/21 (66%) Query: 247 HACSVCDKGFATSAEMKAHVR 267 H C++C KGF A ++ H+R Sbjct: 244 HFCTICGKGFKRDANLRMHMR 264 >At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 499 Score = 29.5 bits (63), Expect = 2.7 Identities = 9/21 (42%), Positives = 14/21 (66%) Query: 247 HACSVCDKGFATSAEMKAHVR 267 H C++C KGF A ++ H+R Sbjct: 244 HFCTICGKGFKRDANLRMHMR 264 >At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 361 Score = 29.5 bits (63), Expect = 2.7 Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 5/72 (6%) Query: 17 VCEYCKFRFKERSNLSGHYRRHHKYKYICRACGITTRMRTKGTTYHTHVRSKHGSELP-W 75 +C+YC F L GH R H + G + + + KH + Sbjct: 10 LCKYCYKTFPSGKALGGHIRIHTNENSV----GYNGNKKKRLVDQRKMMAQKHKQQQQVG 65 Query: 76 CRICGDAFISTK 87 CR CG F+S K Sbjct: 66 CRECGRVFVSLK 77 Score = 29.1 bits (62), Expect = 3.6 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 5/78 (6%) Query: 194 ERPFKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPL-----LCRQVHTGVRRHA 248 E F CKYC TF + A+ H + T V + + L + Q H ++ Sbjct: 6 ENSFLCKYCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRLVDQRKMMAQKHKQQQQVG 65 Query: 249 CSVCDKGFATSAEMKAHV 266 C C + F + ++ H+ Sbjct: 66 CRECGRVFVSLKALRGHM 83 >At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein contains Pfam domain PF00096: Zinc finger, C2H2 type Length = 373 Score = 29.1 bits (62), Expect = 3.6 Identities = 9/21 (42%), Positives = 13/21 (61%) Query: 247 HACSVCDKGFATSAEMKAHVR 267 H C +C KGF A ++ H+R Sbjct: 217 HYCQICGKGFKRDANLRMHMR 237 >At5g06850.1 68418.m00774 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain Length = 669 Score = 29.1 bits (62), Expect = 3.6 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Query: 183 PPQNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLVSTA 221 PPQ V++ G + K K CPN KT M LV A Sbjct: 112 PPQAFVKVQVGNQILKTKLCPN--KTTNPMWNEDLVFVA 148 >At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type Length = 395 Score = 29.1 bits (62), Expect = 3.6 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 6/90 (6%) Query: 18 CEYCKFRFKERSNLSGHYRRH-HKY---KYICRACGITTRM--RTKGTTYHTHVRSKHGS 71 C C F++ + HY+ H+Y + I G+T + + V++ Sbjct: 6 CNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTEALFEARQAAIAQEKVKAVEAP 65 Query: 72 ELPWCRICGDAFISTKTHMERLHKETFDLK 101 L C IC + S+K H + L ++ LK Sbjct: 66 MLYSCGICNKGYRSSKAHEQHLKSKSHVLK 95 >At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein (ZAT12) identical to zinc finger protein ZAT12 [Arabidopsis thaliana] gi|1418325|emb|CAA67232 Length = 162 Score = 28.7 bits (61), Expect = 4.8 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 15/103 (14%) Query: 165 ALYCLILVSAASTDSPVGPPQNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLVSTALVV 224 A CL+L+S ++ G Q V F CK C F ++ A+ H A Sbjct: 15 AANCLMLLSRVGQENVDGGDQKRV--------FTCKTCLKQFHSFQALGGHR----ASHK 62 Query: 225 VPSSPRRTDPLLCRQVHTGVRRHACSVCDKGFATSAEMKAHVR 267 P++ + L+ ++V T H C +C F + H+R Sbjct: 63 KPNNDALSSGLM-KKVKTS--SHPCPICGVEFPMGQALGGHMR 102 >At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein contains multiple zinc finger domains: PF00096: Zinc finger, C2H2 type Length = 412 Score = 28.7 bits (61), Expect = 4.8 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 9/79 (11%) Query: 10 NPVNLEHVCEYCKFRFKERSNLSGHYRRHHK--YKYICRACGITTRMRTKGTTYHTHVRS 67 +P ++ E C F + SNL H + H ++C G R K HVR+ Sbjct: 301 SPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYK------HVRN 354 Query: 68 KHGSELPWCRICGDAFIST 86 KH + CGD F+ T Sbjct: 355 KHENSGYHVYTCGD-FVET 372 >At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein contains multiple zinc finger domains: PF00096: Zinc finger, C2H2 type Length = 324 Score = 28.7 bits (61), Expect = 4.8 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 9/79 (11%) Query: 10 NPVNLEHVCEYCKFRFKERSNLSGHYRRHHK--YKYICRACGITTRMRTKGTTYHTHVRS 67 +P ++ E C F + SNL H + H ++C G R K HVR+ Sbjct: 213 SPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYK------HVRN 266 Query: 68 KHGSELPWCRICGDAFIST 86 KH + CGD F+ T Sbjct: 267 KHENSGYHVYTCGD-FVET 284 >At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type Length = 907 Score = 28.3 bits (60), Expect = 6.3 Identities = 10/25 (40%), Positives = 13/25 (52%) Query: 192 TGERPFKCKYCPNTFKTYPAMSRHH 216 +G F CK+C F P + RHH Sbjct: 594 SGVHKFVCKFCGLKFNLLPDLGRHH 618 >At1g31280.1 68414.m03828 PAZ domain-containing protein / piwi domain-containing protein similar to SP|O04379 Argonaute protein (AGO1) {Arabidopsis thaliana}, SP|Q9XGW1 PINHEAD protein (ZWILLE protein) {Arabidopsis thaliana}; contains Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain Length = 1013 Score = 28.3 bits (60), Expect = 6.3 Identities = 31/124 (25%), Positives = 42/124 (33%), Gaps = 3/124 (2%) Query: 58 GTTYHTHVRSKHGSELPWCRICGDAFISTKTHMERLHKETFDLKQKLPKVPFDLPMFSLR 117 GT T V + + C G S TH L E ++ K+ F++ R Sbjct: 879 GTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCFTFTR 938 Query: 118 IVTPRSLRPQDQYHMVYHQRIHTGEKPYACSECPKRFRMPEQLQVSAALYCLILVSAAST 177 P SL P Y + R G + S K F+ P SAA L S Sbjct: 939 CTKPVSLVPPVYYADMVAFR---GRMYHEASSREKNFKQPRGASTSAASLASSLSSLTIE 995 Query: 178 DSPV 181 D + Sbjct: 996 DKAI 999 >At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 240 Score = 28.3 bits (60), Expect = 6.3 Identities = 9/26 (34%), Positives = 14/26 (53%) Query: 15 EHVCEYCKFRFKERSNLSGHYRRHHK 40 E+ C +C +F + L GH RH + Sbjct: 82 EYECRFCSLKFFKSQALGGHMNRHRQ 107 >At3g57290.1 68416.m06377 eukaryotic translation initiation factor 3E / eIF3e (TIF3E1) identical to eukaryotic initiation factor 3E subunit [Arabidopsis thaliana] gi|12407658|gb|AAG53613 Length = 441 Score = 27.9 bits (59), Expect = 8.3 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 2 LLQSLAEVNPVNLEHVCEYCKFRFKERSNLSGHYRRHHKYKYIC 45 +L+ ++ P +E + +Y KF+F E N SG ++Y+ +C Sbjct: 119 MLKERYQIGPDQIEALYQYAKFQF-ECGNYSGAADYLYQYRTLC 161 >At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) identical to WIP4 protein [Arabidopsis thaliana] gi|18376500|emb|CAC86168; contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 412 Score = 27.9 bits (59), Expect = 8.3 Identities = 12/24 (50%), Positives = 13/24 (54%) Query: 60 TYHTHVRSKHGSELPWCRICGDAF 83 T TH + KHG CR CG AF Sbjct: 326 TLQTHYKRKHGVRPFACRRCGKAF 349 Database: arabidopsis Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.325 0.135 0.438 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,891,138 Number of Sequences: 28952 Number of extensions: 292373 Number of successful extensions: 1135 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 1003 Number of HSP's gapped (non-prelim): 152 length of query: 287 length of database: 12,070,560 effective HSP length: 80 effective length of query: 207 effective length of database: 9,754,400 effective search space: 2019160800 effective search space used: 2019160800 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.7 bits) S2: 59 (27.9 bits)
- SilkBase 1999-2023 -