Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001719-TA|BGIBMGA001719-PA|IPR007087|Zinc finger,
C2H2-type
(287 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 63 3e-12
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 57 1e-10
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 57 1e-10
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 54 9e-10
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 44 1e-06
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 43 2e-06
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 41 1e-05
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 39 4e-05
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 34 0.001
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 34 0.001
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 25 0.65
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 23 2.0
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 62.9 bits (146), Expect = 3e-12
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 135 HQRIHTGEKPYACSECPKRFRMPEQLQVSAALYC----LILVSAASTDSPVGPPQNHVRI 190
H+R HTGEKP+ C EC KRF L+ L+ V + H+R+
Sbjct: 153 HERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRV 212
Query: 191 HTGERPFKCKYCPNTFKTYPAMSRHHLVST 220
HTGERP+ C++C F + H L+ T
Sbjct: 213 HTGERPYGCEHCSMKFSDSNQLKAHVLIHT 242
Score = 56.8 bits (131), Expect = 2e-10
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 130 YHMVYHQRIHTGEKPYACSECPKRF----RMPEQLQVSAALYCLILVSAASTDSPVGPPQ 185
+H+ H R+HTGE+PY C C ++F + L+V + S +
Sbjct: 176 HHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVHTGERPYGCEHCSMKFSDSNQLK 235
Query: 186 NHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLV 218
HV IHT E+PF+C C F+ RHHLV
Sbjct: 236 AHVLIHTNEKPFECDKCRGRFR-----RRHHLV 263
Score = 49.6 bits (113), Expect = 3e-08
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 185 QNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCR------ 238
QNH R HTGE+PF+C+ C F + H + T P D +
Sbjct: 151 QNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTG--ERPYRCEHCDRQFVQVANLRR 208
Query: 239 --QVHTGVRRHACSVCDKGFATSAEMKAHV 266
+VHTG R + C C F+ S ++KAHV
Sbjct: 209 HLRVHTGERPYGCEHCSMKFSDSNQLKAHV 238
Score = 42.7 bits (96), Expect = 3e-06
Identities = 39/145 (26%), Positives = 54/145 (37%), Gaps = 21/145 (14%)
Query: 18 CEYCKFRFKERSNLSGHYRRHHKYK-YICRACGITTRMRTKGTTYHTHVRSKHGSELPW- 75
CE C F + L H R H K + C+ C + T+ TH+R H E P+
Sbjct: 137 CEVCNRSFGYKHVLQNHERTHTGEKPFECQEC---HKRFTRDHHLKTHMR-LHTGERPYR 192
Query: 76 CRICGDAFISTKTHMERLHKETFDLKQKLPKVPFDLPMFSLRIVTPRSLRPQDQYHMVYH 135
C C F+ L T + P+ S++ D + H
Sbjct: 193 CEHCDRQFVQVANLRRHLRVHTGER-------PYGCEHCSMKF--------SDSNQLKAH 237
Query: 136 QRIHTGEKPYACSECPKRFRMPEQL 160
IHT EKP+ C +C RFR L
Sbjct: 238 VLIHTNEKPFECDKCRGRFRRRHHL 262
Score = 37.1 bits (82), Expect = 2e-04
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
Query: 179 SPVGPPQNHVRIHTGERPFKCKYCPNTFKTYPAMSRH---HLVSTALVVVPSSPRRT-DP 234
SP V+ + +RPF C+ C +F + H H R T D
Sbjct: 117 SPTSSVSPEVKDSSRDRPFTCEVCNRSFGYKHVLQNHERTHTGEKPFECQECHKRFTRDH 176
Query: 235 LL--CRQVHTGVRRHACSVCDKGFATSAEMKAHVRTVH 270
L ++HTG R + C CD+ F A ++ H+R VH
Sbjct: 177 HLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLR-VH 213
Score = 27.1 bits (57), Expect = 0.16
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
Query: 18 CEYCKFRFKERSNLSGHYRRHHKYK-YICRACGITTRMRTKGTTYHTHVRSKHGSE---L 73
CE+C +F + + L H H K + C C R R + H + +E
Sbjct: 221 CEHCSMKFSDSNQLKAHVLIHTNEKPFECDKC--RGRFRRRHHLVHHKCGGEEEAERAPA 278
Query: 74 PWCRICGDA 82
P R GDA
Sbjct: 279 PAVRAAGDA 287
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 57.2 bits (132), Expect = 1e-10
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 131 HMVYHQRIHTGEKPYACSECPKRFRMPEQLQVSAALY-------CLILVSAASTDSPVGP 183
++ H R H+GEKP+ C C +RF + + C + A S S +
Sbjct: 36 NLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTL-- 93
Query: 184 PQNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLVSTALVVVP 226
H+RIH+GE+P++CK C F ++RH V A ++P
Sbjct: 94 -TKHLRIHSGEKPYECKLCLLRFSQSGNLNRHMRVHGAASMMP 135
Score = 55.6 bits (128), Expect = 4e-10
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 33/143 (23%)
Query: 135 HQRIHTGEKPYACSECPKRFRMPEQLQVSAALY-------CLILVSAASTDSPVGPPQNH 187
H R H+GEKPY C +C K F L + C + S S V H
Sbjct: 12 HLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSV---TTH 68
Query: 188 VRIHTGERPFKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQVHTGVRRH 247
+R H+GERP++C+ C F +++H ++H+G + +
Sbjct: 69 MRTHSGERPYRCRLCKKAFSDSSTLTKH----------------------LRIHSGEKPY 106
Query: 248 ACSVCDKGFATSAEMKAHVRTVH 270
C +C F+ S + H+R VH
Sbjct: 107 ECKLCLLRFSQSGNLNRHMR-VH 128
Score = 42.7 bits (96), Expect = 3e-06
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 185 QNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLVSTA--LVVVPSSPRR----TDPLLCR 238
+ H+R H+GE+P++C C +F ++ H + P RR +
Sbjct: 10 KTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHM 69
Query: 239 QVHTGVRRHACSVCDKGFATSAEMKAHVR 267
+ H+G R + C +C K F+ S+ + H+R
Sbjct: 70 RTHSGERPYRCRLCKKAFSDSSTLTKHLR 98
Score = 42.3 bits (95), Expect = 4e-06
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 18 CEYCKFRFKERSNLSGHYRRHHKYKYICRACGITTRMRTKGTTYHTHVRSKHGSELPW-C 76
C C F + +NL+ H R H K C + R ++ ++ TH+R+ H E P+ C
Sbjct: 24 CIDCNKSFSQAANLTAHVRTHSGEKPF--RCPVCDRRFSQSSSVTTHMRT-HSGERPYRC 80
Query: 77 RICGDAF--ISTKTHMERLH 94
R+C AF ST T R+H
Sbjct: 81 RLCKKAFSDSSTLTKHLRIH 100
Score = 39.9 bits (89), Expect = 2e-05
Identities = 41/131 (31%), Positives = 51/131 (38%), Gaps = 27/131 (20%)
Query: 29 SNLSGHYRRHHKYK-YICRACGITTRMRTKGTTYHTHVRSKHGSELPW-CRICGDAFI-- 84
S L H R H K Y C C + ++ HVR+ H E P+ C +C F
Sbjct: 7 STLKTHLRTHSGEKPYRCIDCN---KSFSQAANLTAHVRT-HSGEKPFRCPVCDRRFSQS 62
Query: 85 -STKTHMERLHKETFDLKQKLPKVPFDLPMFSLRIVTPRSLRPQDQYHMVYHQRIHTGEK 143
S THM R H + +L K F D + H RIH+GEK
Sbjct: 63 SSVTTHM-RTHSGERPYRCRLCKKAFS-----------------DSSTLTKHLRIHSGEK 104
Query: 144 PYACSECPKRF 154
PY C C RF
Sbjct: 105 PYECKLCLLRF 115
Score = 25.8 bits (54), Expect = 0.37
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 18 CEYCKFRFKERSNLSGHYRRH 38
C+ C RF + NL+ H R H
Sbjct: 108 CKLCLLRFSQSGNLNRHMRVH 128
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 57.2 bits (132), Expect = 1e-10
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 131 HMVYHQRIHTGEKPYACSECPKRFRMPEQLQVSAALY-------CLILVSAASTDSPVGP 183
++ H R H+GEKP+ C C +RF + + C + A S S +
Sbjct: 292 NLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTL-- 349
Query: 184 PQNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLVSTALVVVP 226
H+RIH+GE+P++CK C F ++RH V A ++P
Sbjct: 350 -TKHLRIHSGEKPYECKLCLLRFSQSGNLNRHMRVHGAASMMP 391
Score = 55.6 bits (128), Expect = 4e-10
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 135 HQRIHTGEKPYACSECPKRFRMPEQLQVSAALY-------CLILVSAASTDSPVGPPQNH 187
H R H+GEKPY C +C K F L + C + S S V H
Sbjct: 268 HLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSV---TTH 324
Query: 188 VRIHTGERPFKCKYCPNTFKTYPAMSRH 215
+R H+GERP++C+ C F +++H
Sbjct: 325 MRTHSGERPYRCRLCKKAFSDSSTLTKH 352
Score = 46.4 bits (105), Expect = 2e-07
Identities = 44/144 (30%), Positives = 56/144 (38%), Gaps = 27/144 (18%)
Query: 16 HVCEYCKFRFKERSNLSGHYRRHHKYK-YICRACGITTRMRTKGTTYHTHVRSKHGSELP 74
+VC C + S L H R H K Y C C + ++ HVR+ H E P
Sbjct: 250 NVCRICGKSYARPSTLKTHLRTHSGEKPYRCIDC---NKSFSQAANLTAHVRT-HSGEKP 305
Query: 75 W-CRICGDAF---ISTKTHMERLHKETFDLKQKLPKVPFDLPMFSLRIVTPRSLRPQDQY 130
+ C +C F S THM R H + +L K F D
Sbjct: 306 FRCPVCDRRFSQSSSVTTHM-RTHSGERPYRCRLCKKAF-----------------SDSS 347
Query: 131 HMVYHQRIHTGEKPYACSECPKRF 154
+ H RIH+GEKPY C C RF
Sbjct: 348 TLTKHLRIHSGEKPYECKLCLLRF 371
Score = 44.8 bits (101), Expect = 8e-07
Identities = 39/174 (22%), Positives = 66/174 (37%), Gaps = 14/174 (8%)
Query: 108 PFDLPMFSLRIVTPRSLRPQDQYHMVYHQRIHTGEKPYACSECPKRFRMPEQLQVSAALY 167
P + P+ + P S + H + + +KP C C K + P L+ +
Sbjct: 214 PQETPVLASYKSVPMSFSSPRRRHSI-NLLEEDNQKPNVCRICGKSYARPSTLKTHLRTH 272
Query: 168 C----LILVSAASTDSPVGPPQNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLVSTA-- 221
+ + S HVR H+GE+PF+C C F +++ H +
Sbjct: 273 SGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGER 332
Query: 222 -----LVVVPSSPRRTDPLLCRQVHTGVRRHACSVCDKGFATSAEMKAHVRTVH 270
L S T R +H+G + + C +C F+ S + H+R VH
Sbjct: 333 PYRCRLCKKAFSDSSTLTKHLR-IHSGEKPYECKLCLLRFSQSGNLNRHMR-VH 384
Score = 25.8 bits (54), Expect = 0.37
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 18 CEYCKFRFKERSNLSGHYRRH 38
C+ C RF + NL+ H R H
Sbjct: 364 CKLCLLRFSQSGNLNRHMRVH 384
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 54.4 bits (125), Expect = 9e-10
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 136 QRIHTGEKPYACSECPKRFRMPEQLQVSAALYC----LILVSAASTDSPVGPPQNHVRIH 191
+R HTGEKP+ C EC KRF L+ L+ V + H+R+H
Sbjct: 1 ERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVH 60
Query: 192 TGERPFKCKYC 202
TGERP+ C++C
Sbjct: 61 TGERPYGCEHC 71
Score = 39.1 bits (87), Expect = 4e-05
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 23/82 (28%)
Query: 189 RIHTGERPFKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQVHTGVRRHA 248
R HTGE+PF+C+ C F +R H + T + ++HTG R +
Sbjct: 2 RTHTGEKPFECQECHKRF------TRDHHLKTHM----------------RLHTGERPYR 39
Query: 249 CSVCDKGFATSAEMKAHVRTVH 270
C CD+ F A ++ H+R VH
Sbjct: 40 CEHCDRQFVQVANLRRHLR-VH 60
Score = 33.1 bits (72), Expect = 0.002
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 135 HQRIHTGEKPYACSEC 150
H R+HTGE+PY C C
Sbjct: 56 HLRVHTGERPYGCEHC 71
Score = 26.2 bits (55), Expect = 0.28
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 18 CEYCKFRFKERSNLSGHYRRH-HKYKYICRACGI 50
CE+C +F + +NL H R H + Y C C +
Sbjct: 40 CEHCDRQFVQVANLRRHLRVHTGERPYGCEHCSM 73
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 44.4 bits (100), Expect = 1e-06
Identities = 29/83 (34%), Positives = 34/83 (40%), Gaps = 18/83 (21%)
Query: 185 QNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQVHTGV 244
Q H R HTGERPFKCK C F T + H V A P R
Sbjct: 151 QMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRA-----KPPMRV------------ 193
Query: 245 RRHACSVCDKGFATSAEMKAHVR 267
H C VC K F + ++ H+R
Sbjct: 194 -LHQCPVCHKKFTNALVLQQHIR 215
Score = 35.9 bits (79), Expect = 3e-04
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 10/107 (9%)
Query: 96 ETFDLKQKLPKVPFDLPMFSLRIVTPRSLRPQDQYHMVYHQRIHTGEKPYACSECPKRFR 155
ET L+Q + + L + ++ R L + M H R HTGE+P+ C C + F
Sbjct: 116 ETSKLQQLVDNIEHKLSDPNQCVICHRVLSCKSALQM--HYRTHTGERPFKCKICGRAFT 173
Query: 156 MPEQLQVSAALYCLILVSAASTDSPVGPP--------QNHVRIHTGE 194
L+ ++ PV Q H+R+HTGE
Sbjct: 174 TKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTGE 220
Score = 27.9 bits (59), Expect = 0.092
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 48 CGITTRMRTKGTTYHTHVRSKHGSELPW-CRICGDAFI---STKTHM 90
C I R+ + + H R+ H E P+ C+ICG AF + KTHM
Sbjct: 137 CVICHRVLSCKSALQMHYRT-HTGERPFKCKICGRAFTTKGNLKTHM 182
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 11 PVNLEHVCEYCKFRFKERSNLSGHYRRH 38
P+ + H C C +F L H R H
Sbjct: 190 PMRVLHQCPVCHKKFTNALVLQQHIRLH 217
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 43.2 bits (97), Expect = 2e-06
Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 26/137 (18%)
Query: 136 QRIHTGEKPYACSECPKRFRM-PEQLQVSAA-LYCLILVSAASTDSPVGPPQNHVRIHTG 193
QR +TG C C + R+ P + + ++ + + H+R HTG
Sbjct: 282 QRRYTGRATCDCPNCQEAERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTG 341
Query: 194 ERPFKCK--YCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQVHTGVRRHACSV 251
ERPF C +C F + RH + HTG +R AC +
Sbjct: 342 ERPFVCNWLFCGKRFTRSDELQRH----------------------LRTHTGEKRFACPI 379
Query: 252 CDKGFATSAEMKAHVRT 268
C+K F S + HV+T
Sbjct: 380 CNKRFMRSDHLAKHVKT 396
Score = 39.1 bits (87), Expect = 4e-05
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 26/87 (29%)
Query: 131 HMVYHQRIHTGEKPYACS--ECPKRFRMPEQLQVSAALYCLILVSAASTDSPVGPPQNHV 188
H+ H R HTGE+P+ C+ C KRF ++L Q H+
Sbjct: 331 HLKAHLRWHTGERPFVCNWLFCGKRFTRSDEL------------------------QRHL 366
Query: 189 RIHTGERPFKCKYCPNTFKTYPAMSRH 215
R HTGE+ F C C F +++H
Sbjct: 367 RTHTGEKRFACPICNKRFMRSDHLAKH 393
Score = 29.1 bits (62), Expect = 0.040
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Query: 180 PVGPPQNHVRIHTGERPFKCKYCPNTFKTYPA---MSRHHLVSTALVVVPSSPRRTDPLL 236
P P R +TG C C + PA + + ++ S + +T L
Sbjct: 274 PQVPSPRSQRRYTGRATCDCPNCQEAERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLK 333
Query: 237 CR-QVHTGVRRHACS--VCDKGFATSAEMKAHVRT 268
+ HTG R C+ C K F S E++ H+RT
Sbjct: 334 AHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRT 368
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 40.7 bits (91), Expect = 1e-05
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 130 YHMVYHQRIHTGEKPYACSECPKRFRMPEQLQ 161
Y+++ H+R HT E+PY+C C K FR + L+
Sbjct: 93 YNLLIHERTHTDERPYSCDICGKAFRRQDHLR 124
Score = 30.7 bits (66), Expect = 0.013
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 187 HVRIHTGERPFKCKYCPNTFKTYPAMSRH 215
H R HT ERP+ C C F+ + H
Sbjct: 98 HERTHTDERPYSCDICGKAFRRQDHLRDH 126
Score = 30.3 bits (65), Expect = 0.017
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 15 EHVCEYCKFRFKERSNLSGHYRRH-HKYKYICRACG 49
+ +C+YC +F + NL H R H + Y C CG
Sbjct: 79 QFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICG 114
Score = 29.1 bits (62), Expect = 0.040
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 40 KYKYICRACGITTRMRTKGTTYHTHVRSKHGSELPW-CRICGDAF 83
K ++IC+ C R TK H R+ H E P+ C ICG AF
Sbjct: 77 KRQFICKYCN---RQFTKSYNLLIHERT-HTDERPYSCDICGKAF 117
Score = 27.1 bits (57), Expect = 0.16
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 235 LLCRQVHTGVRRHACSVCDKGFATSAEMKAH 265
L+ + HT R ++C +C K F ++ H
Sbjct: 96 LIHERTHTDERPYSCDICGKAFRRQDHLRDH 126
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 245 RRHACSVCDKGFATSAEMKAHVRT 268
R+ C C++ F S + H RT
Sbjct: 78 RQFICKYCNRQFTKSYNLLIHERT 101
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
Query: 194 ERPFKCKYCPNTF-KTY 209
+R F CKYC F K+Y
Sbjct: 77 KRQFICKYCNRQFTKSY 93
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 39.1 bits (87), Expect = 4e-05
Identities = 13/22 (59%), Positives = 15/22 (68%)
Query: 185 QNHVRIHTGERPFKCKYCPNTF 206
Q H+R HTGE+PF C YC F
Sbjct: 24 QGHIRTHTGEKPFSCTYCNRAF 45
Score = 32.7 bits (71), Expect = 0.003
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 135 HQRIHTGEKPYACSECPKRF 154
H R HTGEKP++C+ C + F
Sbjct: 26 HIRTHTGEKPFSCTYCNRAF 45
Score = 23.8 bits (49), Expect = 1.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 249 CSVCDKGFATSAEMKAHVRT 268
C++C K F+ ++ H+RT
Sbjct: 10 CTICPKAFSRPWLLQGHIRT 29
Score = 23.8 bits (49), Expect = 1.5
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 239 QVHTGVRRHACSVCDKGFA 257
+ HTG + +C+ C++ FA
Sbjct: 28 RTHTGEKPFSCTYCNRAFA 46
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 188 VRIHTGERPFKCKYCPNTFKTYPAMSRHHL 217
+R HT P KC CP F + P + + H+
Sbjct: 1 IRTHT--LPCKCTICPKAF-SRPWLLQGHI 27
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.001
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 129 QYHMVYHQRIHTGEKPYACSEC 150
++H+ YH R H G KP+ C++C
Sbjct: 243 KHHLEYHLRNHAGSKPFQCNKC 264
Score = 31.1 bits (67), Expect = 0.010
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 18 CEYCKFRFKERSNLSGHYRRHHK-YKYICRACGITTR 53
C C + +S L+ H + H Y+Y CR C T+
Sbjct: 261 CNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSYATK 297
Score = 28.7 bits (61), Expect = 0.053
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 187 HVRIHTGERPFKCKYCPNTFKTYPAMSRH 215
H+R H G +PF+C C T ++ H
Sbjct: 249 HLRNHAGSKPFQCNKCDYTCVNKSMLNSH 277
Score = 22.6 bits (46), Expect = 3.5
Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Query: 188 VRIHTGERPFKCKYCPNTFKTYPAMSRH---HLVSTALVVVPSSPRRTDPLLCRQVH--- 241
V H + FKCK C T H H+ + P P T+ + H
Sbjct: 193 VNSHGKIKTFKCKQCDFVAITKLEQWNHSKVHIREDKRLTCPKCPFITEYKHHLEYHLRN 252
Query: 242 -TGVRRHACSVCDKGFATSAEMKAHVRT 268
G + C+ CD + + +H+++
Sbjct: 253 HAGSKPFQCNKCDYTCVNKSMLNSHMKS 280
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 33.9 bits (74), Expect = 0.001
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 129 QYHMVYHQRIHTGEKPYACSEC 150
++H+ YH R H G KP+ C++C
Sbjct: 1 KHHLEYHLRNHAGSKPFQCNKC 22
Score = 31.1 bits (67), Expect = 0.010
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 18 CEYCKFRFKERSNLSGHYRRHHK-YKYICRACGITTR 53
C C + +S L+ H + H Y+Y CR C T+
Sbjct: 19 CNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSYATK 55
Score = 28.7 bits (61), Expect = 0.053
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 187 HVRIHTGERPFKCKYCPNTFKTYPAMSRH 215
H+R H G +PF+C C T ++ H
Sbjct: 7 HLRNHAGSKPFQCNKCDYTCVNKSMLNSH 35
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 25.0 bits (52), Expect = 0.65
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 249 CSVCDKGFATSAEMKAH-VRTVHMK 272
C VCD+ F++ E+ H V+ H K
Sbjct: 550 CKVCDQAFSSLKELSNHMVKNSHYK 574
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 67 SKHGSELPWCRICGDAFISTK 87
S H S + C++C AF S K
Sbjct: 541 SSHVSAVLTCKVCDQAFSSLK 561
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 37 RHHKYKYICRACGITTRMRTKGTTYHTH-VRSKHGSELP 74
R H +C+ GI+ + T YH + ++G P
Sbjct: 123 RDHNLTTLCQELGISVVQKVSHTLYHLQDIIDRNGGRAP 161
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.325 0.135 0.438
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,112
Number of Sequences: 317
Number of extensions: 3173
Number of successful extensions: 107
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 81
length of query: 287
length of database: 114,650
effective HSP length: 56
effective length of query: 231
effective length of database: 96,898
effective search space: 22383438
effective search space used: 22383438
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 43 (21.4 bits)
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