Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001719-TA|BGIBMGA001719-PA|IPR007087|Zinc finger,
C2H2-type
(287 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 41 2e-04
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 39 7e-04
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 36 0.007
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 36 0.007
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 35 0.015
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 33 0.047
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 33 0.062
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 32 0.11
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 31 0.19
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 30 0.33
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 30 0.33
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 30 0.44
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 29 0.77
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 28 1.3
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 27 4.1
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 26 5.4
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 26 7.1
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 26 7.1
SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein Sad1|S... 26 7.1
SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit Air1|Schi... 25 9.5
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 25 9.5
SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 25 9.5
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 40.7 bits (91), Expect = 2e-04
Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 24/157 (15%)
Query: 14 LEHVCEY--CKFRFKERSNLSGHYRRHHKYKYICRACGITTRMRTKG----TTYHTHVRS 67
L + C Y C+ RF + L H R H+ K I +C + + +G + H+R
Sbjct: 142 LPYPCTYQDCELRFATKQKLQNHVNRAHE-KIISYSCPHESCVGHEGFEKWSQLQNHIRE 200
Query: 68 KHGSELPWCRICGDAFISTKTHMER---LHKETFDLKQKLPKVPFDLPMFSLRIVTPRSL 124
H +P C ICG F T H+ LH+ T + ++ + PM + RS
Sbjct: 201 AH---VPSCSICGRQF-KTAAHLRHHVVLHQTTLEERK-----TYHCPMEGCKKSFTRSS 251
Query: 125 RPQDQYHMVYHQRIHTGEKPYACSECPKRFRMPEQLQ 161
+ + IH G + C C +F LQ
Sbjct: 252 ALKKHISV-----IHEGNMAFHCDSCGTKFGYKHMLQ 283
Score = 34.7 bits (76), Expect = 0.015
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 19/155 (12%)
Query: 131 HMVYHQRIHTGEKPYAC--SECPKRFRMPEQLQVSAAL------YCLILVSAASTDSPVG 182
H+ H+R HT KP++C C +F + L+ + Y S
Sbjct: 69 HLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQ 128
Query: 183 PPQNHV-RIHTGERPFKCKY--CPNTFKTYPAMSRHHLVSTALVVVPSSPRRT-----DP 234
++H+ HT P+ C Y C F T + H + ++ S P +
Sbjct: 129 QLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGF 188
Query: 235 LLCRQVHTGVRR-H--ACSVCDKGFATSAEMKAHV 266
Q+ +R H +CS+C + F T+A ++ HV
Sbjct: 189 EKWSQLQNHIREAHVPSCSICGRQFKTAAHLRHHV 223
Score = 32.7 bits (71), Expect = 0.062
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 12/98 (12%)
Query: 185 QNHVRIHTGERPFKCKY--CPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQ--- 239
+ H+R H+ ERPF C Y C F + H T + D Q
Sbjct: 41 EQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHL 100
Query: 240 -----VHTGVRRHACS--VCDKGFATSAEMKAHVRTVH 270
VH + +AC+ CD+ F+ ++++H+ H
Sbjct: 101 ERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACH 138
Score = 31.9 bits (69), Expect = 0.11
Identities = 40/156 (25%), Positives = 54/156 (34%), Gaps = 43/156 (27%)
Query: 135 HQRIHTGEKPYAC--SECPKRFRMPEQLQVSAALYCLILVSAASTDSPVGPPQNHVRIHT 192
H R H+ E+P+ C + C K F L++ H R HT
Sbjct: 43 HLRTHSNERPFVCDYTGCSKAFYRKSHLKI------------------------HKRCHT 78
Query: 193 GERPFKCKY--CPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQVHTGVRRH--A 248
+PF C Y C F T + RH V + D C H +R H A
Sbjct: 79 NVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDE--CFSKHQQLRSHISA 136
Query: 249 CSV-----------CDKGFATSAEMKAHVRTVHMKI 273
C C+ FAT +++ HV H KI
Sbjct: 137 CHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKI 172
Score = 29.5 bits (63), Expect = 0.58
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 23/165 (13%)
Query: 129 QYHMVYHQRIHTGEKPYACS--ECPKRFRMPEQLQ--VSAALYCLILVSAASTDSPV--- 181
Q H+ H +H KPYAC+ C + F +QL+ +SA L+ D +
Sbjct: 97 QQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFA 156
Query: 182 --GPPQNHV-RIHTGERPFKCKY--C--PNTFKTYPAMSRH----HLVSTALV---VVPS 227
QNHV R H + C + C F+ + + H H+ S ++ +
Sbjct: 157 TKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAHVPSCSICGRQFKTA 216
Query: 228 SPRRTDPLLCRQVHTGVRRHACSV--CDKGFATSAEMKAHVRTVH 270
+ R +L + + + C + C K F S+ +K H+ +H
Sbjct: 217 AHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIH 261
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 39.1 bits (87), Expect = 7e-04
Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 129 QYHMVYHQRIHTGEKPYACS--ECPKRFRMPEQL 160
Q H V H R HTGEKP+ CS C KRF ++L
Sbjct: 16 QEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDEL 49
Score = 35.5 bits (78), Expect = 0.009
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 187 HVRIHTGERPFKCKY--CPNTFKTYPAMSRHHLVSTALVVVPSSPRRT 232
H+R HTGE+PF+C Y C F + RH V T L +P +T
Sbjct: 22 HIRSHTGEKPFECSYPSCKKRFTRRDELIRH--VRTHLRKALVTPEQT 67
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 35.9 bits (79), Expect = 0.007
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 131 HMVYHQRIHTGEKPYACS--ECPKRFRMPEQLQVSAALY 167
H H R HTGEKP+ C+ C KRF ++L A ++
Sbjct: 40 HQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 32.3 bits (70), Expect = 0.082
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 187 HVRIHTGERPFKCKY--CPNTFKTYPAMSRHHLVST 220
H+R HTGE+P C + C F ++RH + T
Sbjct: 44 HIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 31.5 bits (68), Expect = 0.14
Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 24/98 (24%)
Query: 172 VSAASTDSPVGPPQNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRR 231
+S A+T + G P + RP+KC C F +RH
Sbjct: 1 MSEATTATTTGKPSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRH---------------- 44
Query: 232 TDPLLCRQVHTGVRRHACSV--CDKGFATSAEMKAHVR 267
+ HTG + H C+ C K F+ S E+ H R
Sbjct: 45 ------IRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR 76
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 35.9 bits (79), Expect = 0.007
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 22/84 (26%)
Query: 185 QNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQVHTGV 244
++H+ HT RPF+C C +F +R H RR + Q+HTG+
Sbjct: 588 KSHMNTHTNYRPFQCSICKKSF------ARQH-----------DKRRHE-----QLHTGI 625
Query: 245 RRHACSVCDKGFATSAEMKAHVRT 268
+ AC C++ FA + H ++
Sbjct: 626 KAFACVTCNQRFARMDALNRHYKS 649
Score = 32.7 bits (71), Expect = 0.062
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 24/87 (27%)
Query: 130 YHMVYHQRIHTGEKPYACSECPKRFRMPEQLQVSAALYCLILVSAASTDSPVGPPQNHVR 189
Y++ H HT +P+ CS C K F A D + H +
Sbjct: 585 YNLKSHMNTHTNYRPFQCSICKKSF-------------------ARQHDK-----RRHEQ 620
Query: 190 IHTGERPFKCKYCPNTFKTYPAMSRHH 216
+HTG + F C C F A++RH+
Sbjct: 621 LHTGIKAFACVTCNQRFARMDALNRHY 647
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 34.7 bits (76), Expect = 0.015
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 187 HVRIHTGERPFKCKY--CPNTFKTYPAMSRH-HLVSTALVVVPSSP 229
H+R HTGE+PF C C +F A+++H V A + PS P
Sbjct: 96 HLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEADTLRPSDP 141
Score = 34.3 bits (75), Expect = 0.020
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 129 QYHMVYHQRIHTGEKPYACS--ECPKRFRMPEQL 160
++ +V H R HTGEKP+ CS EC + F + L
Sbjct: 90 RFALVAHLRSHTGEKPFICSVPECDRSFTRSDAL 123
Score = 33.5 bits (73), Expect = 0.036
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 241 HTGVRRHACSV--CDKGFATSAEMKAHVRTVH 270
HTG + CSV CD+ F S + H+RTVH
Sbjct: 100 HTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 33.1 bits (72), Expect = 0.047
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 187 HVRIHTGERPFKCKY--CPNTFKTYPAMSRHHLV 218
H HTGERPF C Y C F M RH +
Sbjct: 486 HTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRI 519
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 135 HQRIHTGEKPYAC--SECPKRFRMPEQLQ 161
H HTGE+P+ C + C K F + ++
Sbjct: 486 HTYSHTGERPFVCDYAGCGKAFNVRSNMR 514
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 32.7 bits (71), Expect = 0.062
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 239 QVHTGVRRHACSVCDKGFATSAEMKAHVRTVHMK 272
+ H V+ +CS C++ FA S + HV+ +H++
Sbjct: 48 RTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQ 81
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 185 QNHVRIHTGERPFKCKYCPNTFKTYPAMSRH 215
+ H R H + F C +C F ++RH
Sbjct: 44 RRHERTHENVKAFSCSFCNRAFARSDVLNRH 74
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 131 HMVYHQRIHTGEKPYACSECPKRFRMPEQL 160
H+ H+R H K ++CS C + F + L
Sbjct: 42 HLRRHERTHENVKAFSCSFCNRAFARSDVL 71
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 31.9 bits (69), Expect = 0.11
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 55 RTKGTTYHTHVRSKHGSELPWCRICGDAFISTKTHMERLHKETFDLKQKLPKVPFDLPMF 114
R + + H+RS H + P+ R ++ S+ TH R +K P DL F
Sbjct: 332 RAEPIVMNGHMRSLHNATSPF-RPFSPSYRSSDTHSPRTRSPNVQTHKKTSSQPSDLSSF 390
Query: 115 SLRIVTPRSLRPQ 127
+ + P+ L P+
Sbjct: 391 AQLLSPPQVLSPK 403
Score = 29.5 bits (63), Expect = 0.58
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 1 MLLQSLAEVNPV--NLEHVCEYCKFRFKERSNLSGHYRRHHKYKYICRAC 48
ML+Q+ ++ PV + H C C+ R K+ + +SG Y +H+ + C C
Sbjct: 60 MLVQT-SDGRPVCSSCAHTCTACRMRIKDYALMSG-YDSYHRECFRCHDC 107
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 31.1 bits (67), Expect = 0.19
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 185 QNHVRIHTGERPFKCKYCPNTFKTYPAMSRH 215
++H++ H +RP++C C F + + RH
Sbjct: 461 ESHIQTHLSDRPYRCDLCKAGFVRHHDLKRH 491
Score = 29.9 bits (64), Expect = 0.44
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 185 QNHVRIHTGERPFKCKYCPNTFKTYPAMSRH 215
+ H+RIH RP+ C+ C F A++RH
Sbjct: 489 KRHLRIHENGRPYVCE-CLKRFNRLDALNRH 518
Score = 29.1 bits (62), Expect = 0.77
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 135 HQRIHTGEKPYACSECPKRFRMPEQL 160
H RIH +PY C EC KRF + L
Sbjct: 491 HLRIHENGRPYVC-ECLKRFNRLDAL 515
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 239 QVHTGVRRHACSVCDKGFATSAEMKAHVR 267
Q H R + C +C GF ++K H+R
Sbjct: 465 QTHLSDRPYRCDLCKAGFVRHHDLKRHLR 493
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 30.3 bits (65), Expect = 0.33
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 185 QNHVRIHTGERPFKCKYCPNTFKTYPAMSRH 215
+ H R HT + F C +C ++F ++RH
Sbjct: 35 RRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 241 HTGVRRHACSVCDKGFATSAEMKAHVRTVHMK 272
HT + C C F S + HV H+K
Sbjct: 41 HTNSKAFICPHCSSSFTRSDVLNRHVNQKHVK 72
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 30.3 bits (65), Expect = 0.33
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 131 HMVYHQRIHTGEKPYACSE 149
H+ H R HT EKP+ CSE
Sbjct: 84 HLKRHIRSHTNEKPFTCSE 102
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 217 LVSTALVVVPSSPRRTDPLLCRQVHTGVRRHACSVCDKGFATSAEMKAHVRT 268
+ S + V S+ + DP Q V+++ C C + FA +K H+R+
Sbjct: 43 VTSNSKPVASSTAAKKDPNAPPQK---VKQYVCETCTRAFARLEHLKRHIRS 91
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 185 QNHVRIHTGERPFKC 199
+ H+R HT E+PF C
Sbjct: 86 KRHIRSHTNEKPFTC 100
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 29.9 bits (64), Expect = 0.44
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 10/63 (15%)
Query: 131 HMVYHQR-IHTGEKPYACSECPKRF------RMPEQLQVSAA--LYCLILVSAASTDSPV 181
H+ H R +HT EKP+ C C KRF R E+L V+A+ L C S +
Sbjct: 437 HLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLHVNASPRLACFFQPSGYYSSGAP 495
Query: 182 GPP 184
G P
Sbjct: 496 GAP 498
Score = 29.1 bits (62), Expect = 0.77
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 43 YICRACGITTRMRTKGTTYHTHVRSKHGSELPWCRICGDAFI---STKTHMERLH 94
++C C ++ + H+RS H SE P+ ICG F + + H ERLH
Sbjct: 423 FVCPEC---SKKFKRSEHLRRHIRSLHTSEKPFVCICGKRFSRRDNLRQH-ERLH 473
Score = 27.1 bits (57), Expect = 3.1
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 243 GVRRHACSVCDKGFATSAEMKAHVRTVH 270
G + C C K F S ++ H+R++H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLH 446
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 141 GEKPYACSECPKRFRMPEQLQ 161
G K + C EC K+F+ E L+
Sbjct: 419 GGKSFVCPECSKKFKRSEHLR 439
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 29.1 bits (62), Expect = 0.77
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 18 CEYCKFRFKERSNLSGHYRRHHKYKYIC 45
CE+C F + L H R H+ YIC
Sbjct: 247 CEFCNTHFYDDDELFKHCREKHERCYIC 274
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 28.3 bits (60), Expect = 1.3
Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
Query: 174 AASTDSPVGPPQNHVRIHTGERPFKCKY--CPNTFKTYPAMSRHHLVSTALVVVPSSPRR 231
A S DSP+ + ++P+KC C +K + H L + +P
Sbjct: 327 AFSHDSPLTIDYPGSNLVVVDKPYKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPA- 385
Query: 232 TDPLLCRQVHTGVRRHACSVCDKGFATSAEMKAHVRTVHMKI 273
P+ + + + C VC K + +K H H+++
Sbjct: 386 --PIPHQGFVVENKPYRCEVCSKRYKNLNGLKYHRTHSHLQV 425
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 7/91 (7%)
Query: 142 EKPYACS--ECPKRFRMPEQLQVSAALYCLILVSAASTDSPVGPPQNHVRIHTGERPFKC 199
+KPY C C K ++ L+ Y + + +P P H +P++C
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLK-----YHKLHGHCSPITTPTPAPIPHQGFVVENKPYRC 401
Query: 200 KYCPNTFKTYPAMSRHHLVSTALVVVPSSPR 230
+ C +K + H S V + + R
Sbjct: 402 EVCSKRYKNLNGLKYHRTHSHLQVSMAQAQR 432
Score = 25.8 bits (54), Expect = 7.1
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 135 HQRIHTGEKPYACSECPKRFR 155
HQ KPY C C KR++
Sbjct: 389 HQGFVVENKPYRCEVCSKRYK 409
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 26.6 bits (56), Expect = 4.1
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 18 CEYCKFRFKERSNLSGHYRRHHKYKYICRACGIT 51
C+YC ++ + + Y +HK++ C G T
Sbjct: 1334 CQYCPYKNADELMVGFGYHYNHKWRNFCIMIGYT 1367
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 10 NPVNLEHVCEYCKFRFKERSNLSGHYRRHHKYKYI 44
N N C+ C F ++S L+ H R +H+ + +
Sbjct: 133 NMPNATFRCDKCDMMFVKQSGLTNHKRTYHQVETV 167
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 18 CEYCKFRFKERSNLSGHYRRHHKYKYI-CRACGITTRMR 55
C+ C RF NL+ H H K + I C C I + +
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRK 71
Score = 25.8 bits (54), Expect = 7.1
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 18 CEYCKFRFKERSNLSGHYRRHHKYKYI 44
C YC+ + K + L H +R H K +
Sbjct: 61 CPYCEIKCKRKDLLKRHIQRFHNDKSV 87
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 91 ERLHKETFDLKQKLPKVPFDLPMFSLR 117
E L E+ + LPK PFDLPM +L+
Sbjct: 3 ENLQSESIP-HEILPKEPFDLPMNNLK 28
>SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein
Sad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Query: 92 RLHKETFDLKQKLPKVPFDL-----PMFSLRIVTPRSLRPQDQYHMVYHQRI 138
++H+ T DL K+ K+ + S+ +TP+ P + YH I
Sbjct: 30 QIHQNTADLASKMHKLRYTKIRSPPTRVSIESITPKQRFPAPNFEQAYHSNI 81
>SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit
Air1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 313
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 227 SSPRRTDPLLCRQVHTGVRRHACSVC 252
S PR+ P +CR HT H S C
Sbjct: 141 SEPRKRGPRVCRTCHTDT--HTSSTC 164
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 174 AASTDSPVGPPQNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTD 233
A +SP+ PP ++ +RP++ + ++F T S ++L + V SP D
Sbjct: 472 AHPNNSPLRPPSLQGILNAEDRPYEIEPSRSSFATNDTGSYNNLELLSSVTNLKSPNEND 531
>SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 398
Score = 25.4 bits (53), Expect = 9.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 193 GERPFKCKYCPN 204
G + FKC YCPN
Sbjct: 375 GSQRFKCPYCPN 386
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.325 0.135 0.438
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,309,942
Number of Sequences: 5004
Number of extensions: 54755
Number of successful extensions: 232
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 156
Number of HSP's gapped (non-prelim): 75
length of query: 287
length of database: 2,362,478
effective HSP length: 72
effective length of query: 215
effective length of database: 2,002,190
effective search space: 430470850
effective search space used: 430470850
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 53 (25.4 bits)
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