Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001719-TA|BGIBMGA001719-PA|IPR007087|Zinc finger,
C2H2-type
(287 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 38 0.012
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 37 0.022
03_06_0478 + 34214412-34214846 36 0.038
01_06_1284 + 35994595-35995074 36 0.038
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 36 0.050
07_03_1104 + 24001594-24002139 35 0.066
03_02_0567 - 9495290-9495796 35 0.066
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 35 0.066
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 35 0.087
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 35 0.087
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 35 0.087
12_01_0335 - 2583476-2583493,2583919-2583965,2584151-2584274,258... 34 0.11
11_08_0066 - 28131521-28132012 34 0.11
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 33 0.20
03_04_0187 - 18236041-18236643 33 0.20
09_02_0366 + 7941550-7942161,7942230-7942775 33 0.35
04_04_0733 + 27639581-27641257 33 0.35
09_04_0564 + 18565583-18566449,18569662-18570123 32 0.61
08_02_1172 + 24898290-24899141,24900864-24901328 32 0.61
03_04_0134 - 17593449-17594702 32 0.61
04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019 31 0.81
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 31 1.4
06_03_1229 + 28571131-28571235,28572108-28572656,28572749-285729... 31 1.4
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 30 1.9
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 30 1.9
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 30 1.9
08_02_1602 - 28148255-28149413,28151927-28152087 29 3.3
06_03_0743 + 24069752-24070483,24071890-24072345 29 3.3
03_06_0607 + 35037467-35038624 29 3.3
12_01_0596 + 4867388-4867405,4869095-4869151,4869624-4869701,487... 29 4.3
12_01_0454 + 3580332-3581714 29 4.3
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 29 4.3
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 29 4.3
02_04_0316 - 21978330-21979397 29 4.3
01_06_1614 - 38648495-38649706 29 4.3
07_03_1095 + 23926977-23927657 29 5.7
02_02_0525 - 11182043-11182080,11182386-11182511,11182760-11183486 29 5.7
12_02_0916 - 24271151-24271894 28 7.5
06_01_0939 + 7232682-7232933,7233048-7233228,7233354-7233463,723... 28 7.5
01_06_1495 + 37769982-37771496 28 7.5
05_05_0115 - 22493350-22493874 28 10.0
02_05_0201 + 26687369-26689228 28 10.0
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 28 10.0
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 187 HVRIHTGERPFKCKY--CPNTFKTYPAMSRH 215
H+R+HTGERP+KC C +F+ SRH
Sbjct: 867 HIRVHTGERPYKCSAPDCGQSFRYVSDYSRH 897
Score = 35.1 bits (77), Expect = 0.066
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 185 QNHVRIHTGERPFKCKY--CPNTFKTYPAMSRHHLVST 220
+ H +H ERPFKC + CP TFK A + H V T
Sbjct: 835 KRHQCVHRDERPFKCPWDGCPMTFKWLWAQTEHIRVHT 872
Score = 33.1 bits (72), Expect = 0.27
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Query: 135 HQRIHTGEKPYACS--ECPKRFR 155
H R+HTGE+PY CS +C + FR
Sbjct: 867 HIRVHTGERPYKCSAPDCGQSFR 889
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 238 RQVHTGVRRHACSVCDKGFATSAEMKAHVRT 268
R+ H+G R+ ACS C K +A ++ KAH++T
Sbjct: 134 RRKHSGHRQWACSRCSKAYAVHSDYKAHLKT 164
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 16 HVCEYCKFRFKERSNLSGHYRRHH-KYKYICRACGITTRMR 55
+VCE C F+ NL H RRH +K + R G R R
Sbjct: 65 YVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKR 105
>03_06_0478 + 34214412-34214846
Length = 144
Score = 35.9 bits (79), Expect = 0.038
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Query: 157 PEQLQVSAALYCLILVSAASTDSPVGPPQNHVRIHTGERPFKCKYCPNTFKTYPAMSRH- 215
P +V + L L +AA + P + +G F CK C F ++ A+ H
Sbjct: 5 PRDGEVISLSLSLTLGAAADSGERKKPRRGSSPAASGSGDFVCKTCSRAFPSFQALGGHR 64
Query: 216 --HL---VSTALVVVPSSPRRTDPLLCRQVHTGVRRHACSVCDKGFATSAEMKAHVR 267
HL AL + ++ + T + ++ H C +C +GF + H+R
Sbjct: 65 TSHLRGRHGLALGLAAATAKETTKKV-QEKPAAAATHECHICGQGFEMGQALGGHMR 120
>01_06_1284 + 35994595-35995074
Length = 159
Score = 35.9 bits (79), Expect = 0.038
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 9/111 (8%)
Query: 158 EQLQVSAALYCLILVSAASTDSPVGPPQNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHL 217
E L+V A+ + AAS P T E F+CK C F ++ A+ H
Sbjct: 2 ESLRVHASALLSLSSPAASASQPTSSSS------TTEGVFECKTCSKRFPSFQALGGHRT 55
Query: 218 VSTAL-VVVPSSPRRTDPLLCRQVHTGVRRHACSVCDKGFATSAEMKAHVR 267
T L + S P + R H C+VC F+ + H+R
Sbjct: 56 SHTRLQAKLLSDPAAAAAAAAER--DRARVHECAVCGVEFSMGQALGGHMR 104
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 35.5 bits (78), Expect = 0.050
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 238 RQVHTGVRRHACSVCDKGFATSAEMKAHVRT 268
R+ H+G R+ AC+ C K +A ++ KAH++T
Sbjct: 135 RRKHSGHRQWACARCSKAYAVHSDYKAHLKT 165
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 16 HVCEYCKFRFKERSNLSGHYRRHH-KYKYICRACGITTRMR 55
+VCE C F+ NL H RRH +K + R G R R
Sbjct: 66 YVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKR 106
>07_03_1104 + 24001594-24002139
Length = 181
Score = 35.1 bits (77), Expect = 0.066
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 17/91 (18%)
Query: 194 ERPFKCKYCPNTFKTYPAMSRH---HLVSTAL---------VVVPSSPRRT-----DPLL 236
E F+C C F +Y A+ H H +A VVV ++P + D
Sbjct: 24 ELHFRCSLCGKAFASYQALGGHKASHRKPSAAAAAPPAHRDVVVAAAPASSGRVAADADA 83
Query: 237 CRQVHTGVRRHACSVCDKGFATSAEMKAHVR 267
+ RRH CS+C +GFAT + H R
Sbjct: 84 ASEADGRRRRHVCSLCRRGFATGQALGGHKR 114
>03_02_0567 - 9495290-9495796
Length = 168
Score = 35.1 bits (77), Expect = 0.066
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Query: 194 ERPFKCKYCPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQVHTGVRRHACSVCD 253
ER F+CK C F ++ A+ H PR D + + H CS+C
Sbjct: 25 ERMFECKTCNRQFPSFQALGGHR-------ASHKKPRLADGDPAAEAPAKPKVHGCSICG 77
Query: 254 KGFATSAEMKAHVR 267
FA + H+R
Sbjct: 78 LEFAVGQALGGHMR 91
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 35.1 bits (77), Expect = 0.066
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 13/104 (12%)
Query: 18 CEYCKFRFKERSNLSGHYRRHHK--YKYICR--ACGITTRMRTKGTTYHTHVRSKHG--- 70
C+ C F + L H+ HK +++ R +C + T HV+ KHG
Sbjct: 465 CKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGYSCAVCMDSFTNRRVLERHVQEKHGAQY 524
Query: 71 ---SELPWCRICGDAFISTK---THMERLHKETFDLKQKLPKVP 108
S L C C F++T H+ H F L +P+ P
Sbjct: 525 LQYSTLLRCISCNSNFLNTDLLWQHIVSDHSRDFSLLDHVPRRP 568
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 34.7 bits (76), Expect = 0.087
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 187 HVRIHTGERPFKCKY--CPNTFKTYPAMSRH 215
H+R+HTG RP++C+ C TF+ SRH
Sbjct: 1303 HMRVHTGVRPYECQEPGCGQTFRFVSDFSRH 1333
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Query: 135 HQRIHTGEKPYACSE--CPKRFR 155
H R+HTG +PY C E C + FR
Sbjct: 1303 HMRVHTGVRPYECQEPGCGQTFR 1325
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 187 HVRIHTGERPFKC--KYCPNTFKTYPAMSRHHLVSTAL 222
H ++H ERP KC K C FK A + H V T +
Sbjct: 1273 HRKVHIDERPLKCTWKGCKKAFKWPWARTEHMRVHTGV 1310
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 34.7 bits (76), Expect = 0.087
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 238 RQVHTGVRRHACSVCDKGFATSAEMKAHVRT 268
R+ H G R+ C+ C KG+A ++ KAH++T
Sbjct: 122 RRKHGGRRQWVCARCAKGYAVQSDYKAHLKT 152
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 16 HVCEYCKFRFKERSNLSGHYRRH 38
+VCE C F+ NL H RRH
Sbjct: 31 YVCEICGQGFQREQNLQMHRRRH 53
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 34.7 bits (76), Expect = 0.087
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 187 HVRIHTGERPFKCKY--CPNTFKTYPAMSRH 215
H+R+HTG+RP+ C C TF+ SRH
Sbjct: 1159 HLRVHTGDRPYVCHEPGCAQTFRFVSDFSRH 1189
Score = 32.3 bits (70), Expect = 0.46
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Query: 135 HQRIHTGEKPYACSE--CPKRFR 155
H R+HTG++PY C E C + FR
Sbjct: 1159 HLRVHTGDRPYVCHEPGCAQTFR 1181
>12_01_0335 -
2583476-2583493,2583919-2583965,2584151-2584274,
2584421-2584665,2585281-2585404,2585424-2585456
Length = 196
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 166 LYCLILVSAASTDSPVGPPQN----HVRIHTGERPFKCKYCPNTFKTYPAMSRHH 216
L CLI + A+ D P P++ H+ H + KCK C F T A +HH
Sbjct: 113 LSCLICMEASQCDDPRYIPKHKFGRHMSRHHSKATVKCKDCLLAFDTAAAAGKHH 167
>11_08_0066 - 28131521-28132012
Length = 163
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 10/109 (9%)
Query: 159 QLQVSAALYCLILVSAASTDSPVGPPQNHVRIHTGERPFKCKYCPNTFKTYPAMSRHHLV 218
QL +S A +S++ + P + F+C+ C F ++ A+ H
Sbjct: 33 QLSLSLACGSTTAMSSSGDEEDAEPRRRRRDEEAAAAAFECRTCGRRFPSHQALGGHRTS 92
Query: 219 STALVVVPSSPRRTDPLLCRQVHTGVRRHACSVCDKGFATSAEMKAHVR 267
P + PL+ HAC VC GF + H+R
Sbjct: 93 HLRPTTNKRRPGPSKPLI----------HACEVCGLGFQMGQALGGHMR 131
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 14 LEHVCEYCKFRFKERSNLSGHYRRH 38
L H CE C F+ L GH RRH
Sbjct: 109 LIHACEVCGLGFQMGQALGGHMRRH 133
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 33.5 bits (73), Expect = 0.20
Identities = 36/159 (22%), Positives = 60/159 (37%), Gaps = 17/159 (10%)
Query: 128 DQYHMVYHQRIHTGEKPYACSE--CPKRFRMPEQLQVSAALYCL------ILVSAASTDS 179
D + H IHTG+K + C C K F + L+ + L + +
Sbjct: 129 DSSKLKRHHLIHTGQKDFICPHPGCGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFT 188
Query: 180 PVGPPQNHVRIH--TGERPFKCKYCPNTFK----TYPAMSRHHLVSTALVVVPSSPRRTD 233
++HV+ H TG P +Y P++ K + PA +T ++P T
Sbjct: 189 SDSKLKSHVKGHEKTG-TPITAQYVPSSDKPQSSSKPATPATTKPTTPAATKTTTPASTK 247
Query: 234 PLLCRQVHTGVRRHACSV--CDKGFATSAEMKAHVRTVH 270
P R + C C K + S ++ H++T H
Sbjct: 248 PTTPAPTSFAERPYVCPYDGCGKAYIHSYKLNLHLKTQH 286
>03_04_0187 - 18236041-18236643
Length = 200
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 11/82 (13%)
Query: 197 FKCKYCPNTFKTYPAM----SRHHLVSTA-----LVVVPSSPRRTDPLLCRQVHT--GVR 245
F+C C F ++ A+ + H TA ++ P P D T G
Sbjct: 48 FRCSVCGKAFPSHQALGGHKASHRKPPTAALPMHVIDAPPPPSAEDTASSSTTTTTSGGG 107
Query: 246 RHACSVCDKGFATSAEMKAHVR 267
RH CSVC + FAT + H R
Sbjct: 108 RHRCSVCHRTFATGQALGGHKR 129
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 26 KERSNLSGHYRRHHKYK-YICRACGITTRMRTKGTTYHTHVRSKHGSELPWCRICGDAF 83
K+ L HYRR H + Y CR CG R +G + TH K+ +L W +CG F
Sbjct: 261 KDFRTLQTHYRRKHGARPYACRRCG--KRFAVRG-DWRTH--EKNCGKL-WFCVCGSDF 313
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 121 PRSLRPQDQYHMVYHQRIHTGEKPYACSECPKRF 154
PR+ +D + H R G +PYAC C KRF
Sbjct: 255 PRARPLKDFRTLQTHYRRKHGARPYACRRCGKRF 288
>04_04_0733 + 27639581-27641257
Length = 558
Score = 32.7 bits (71), Expect = 0.35
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 226 PSSPRRTDPLLCRQVHTGVRRHACSVCDKGFATSAEMKAHVR 267
PSSPR P + +G + H C VC+KGF + + H+R
Sbjct: 5 PSSPRAPPPTAAQA--SGYK-HFCRVCNKGFTCGSALGGHMR 43
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 26 KERSNLSGHYRRHHKYK-YICRACGITTRMRTKGTTYHTHVRSKHGSELPWCRICGDAF 83
K+ L HY+R H K ++CR CG KG + TH K+ +L +C +CG F
Sbjct: 339 KDFRTLQTHYKRKHGLKPFLCRKCG--KAFAVKG-DWRTH--EKNCGKLWYC-LCGSEF 391
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 26 KERSNLSGHYRRHHKYK-YICRACGITTRMRTKGTTYHTHVRSKHGSELPWCRICGDAF 83
K+ L HY+R H K ++CR CG KG + TH K+ +L +C +CG F
Sbjct: 334 KDFRTLQTHYKRKHGLKPFLCRKCG--KAFAVKG-DWRTH--EKNCGKLWYC-LCGSEF 386
>03_04_0134 - 17593449-17594702
Length = 417
Score = 31.9 bits (69), Expect = 0.61
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 246 RHACSVCDKGFATSAEMKAHVRT 268
RH+C VC KGFA + H+R+
Sbjct: 16 RHSCKVCGKGFACGRSLGGHMRS 38
>04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019
Length = 486
Score = 31.5 bits (68), Expect = 0.81
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 34 HYRRHHKYK-YICRACGITTRMRTKGTTYHTHVRSKHGSELPWCRICGDAF 83
HYRR H K Y+C CG + + TH KH EL W CG F
Sbjct: 398 HYRRSHCPKMYVCGRCG--GKQFAVLSDLRTH--EKHCGELRWLCSCGTFF 444
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 247 HACSVCDKGFATSAEMKAHVR 267
H C VC KGF A ++ H+R
Sbjct: 322 HYCQVCGKGFKRDANLRMHMR 342
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 237 CRQVHTGVRRHACSVCDKGFATSAEMKAHVRT 268
CR+ H G +R C C K +A A++KAH +T
Sbjct: 129 CRK-H-GEKRWTCQRCGKRYAVQADLKAHTKT 158
>06_03_1229 +
28571131-28571235,28572108-28572656,28572749-28572918,
28573454-28573669,28573787-28573946
Length = 399
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 8/115 (6%)
Query: 18 CEYCKFRFKERSNLSGHYRRH-HKYKYICRACGITTRMRTKGTTYHTHVRSKHGSE---- 72
C C F + HYR H+Y + G+ T + S+
Sbjct: 6 CNACNAGFDDEEQQRLHYRSEWHRYNLKRKVAGVPGVTEALFLARQTALAEGSNSDSTPM 65
Query: 73 LPWCRICGDAFISTKTHMERLHKETFDLKQKLPKVPFDLPMFSLRIVTPRSLRPQ 127
L C +CG + S+K H + L+ + +K + P + + + IV PR R Q
Sbjct: 66 LYSCALCGKEYRSSKAHAQHLNSRSHLMKAS--QEP-NASIAGITIVKPRPERVQ 117
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 9/95 (9%)
Query: 17 VCEYCKFRFKERSNLSGHYRRHHKYKY--ICRACGITTRMRTKGTTYHTHVRSKHGSELP 74
+C +C RF S+L H H++ + + + G+ K + VRSK
Sbjct: 56 LCLFCSARFDSESSLFSHCASEHRFDFYRVVKETGMDFYGCIKLINF---VRSKVAENKC 112
Query: 75 WCRICGDAFISTKTHMERLHKETFDLKQKLPKVPF 109
W CG F S LH ++ Q KVP+
Sbjct: 113 WS--CGQVFSSNSELCGHLH--ALEIPQLEGKVPW 143
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 179 SPVGPPQNHVRIHTGERPFKCKYCPNTFKTYPAMSRH 215
+P PP + +R ++C C TF T+ A+ H
Sbjct: 445 APPPPPVKRIPSPASKRKYECSECHKTFSTHQALGGH 481
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Query: 13 NLEHVC--EYCKFRFKERSNLSGHYRRHHKYKYICRACGITTRMRTKGTTYHTHVRSKHG 70
N + VC E C FK S + H H K Y+ C M+T ++
Sbjct: 151 NRQFVCKEEGCNKVFKYASKMKKHEESHVKLDYVEVVCCEPGCMKTFTNVECLRAHNQAC 210
Query: 71 SELPWCRICGDAFI--STKTHMERLHKE 96
+ C ICG+ + + K H+ R H+E
Sbjct: 211 HQYVQCDICGEKHLKKNIKRHL-RAHEE 237
>08_02_1602 - 28148255-28149413,28151927-28152087
Length = 439
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 247 HACSVCDKGFATSAEMKAHVR 267
H C VC KGF A ++ H+R
Sbjct: 258 HYCQVCGKGFKRDANLRMHMR 278
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 26 KERSNLSGHYRRHHKYK-YICRACGITTRMRTKGTTYHTHVRSKHGSELPWCRICGDAF 83
K+ L HY+R H K ++CR CG +R + TH K+ +L +C CG F
Sbjct: 294 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVR---GDWRTH--EKNCGKLWYC-ACGSDF 346
>03_06_0607 + 35037467-35038624
Length = 385
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 247 HACSVCDKGFATSAEMKAHVR 267
H C VC KGF A ++ H+R
Sbjct: 164 HFCGVCGKGFKRDANLRMHMR 184
>12_01_0596 +
4867388-4867405,4869095-4869151,4869624-4869701,
4870467-4870549,4870775-4870874,4871384-4871659,
4872198-4872258,4872365-4872465
Length = 257
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 110 DLPMFSLRIVTPRSLRPQDQYHMVYHQRIHTGEKPYACSECPKRFRMPEQLQVSA 164
D+ + +R V P YH R+ +G +P + E + +PE L V A
Sbjct: 56 DIMVTDVRCVAPDFHARYKALERTYHYRLLSGSEPLSVFEKTSAWHIPEDLNVQA 110
>12_01_0454 + 3580332-3581714
Length = 460
Score = 29.1 bits (62), Expect = 4.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 247 HACSVCDKGFATSAEMKAHVR 267
H C +C KGF A ++ H+R
Sbjct: 224 HFCGICGKGFKRDANLRMHMR 244
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 187 HVRIHTGERPFKCKY--CPNTFKTYPAMSRH 215
H ++H G+RP+KC C +K +RH
Sbjct: 613 HFQVHAGKRPYKCTTPGCSKIYKFVSDFTRH 643
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 45 CRACGITTR----MRTKGTTYH-THVRSKH-GSELPWCRICG-DAFISTKTHMERLHKET 97
C+AC T + G +YH T + H L C D + KTH E+L KET
Sbjct: 10 CKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKTHFEQLFKET 69
Query: 98 FDLKQK 103
+K
Sbjct: 70 GSFSKK 75
>02_04_0316 - 21978330-21979397
Length = 355
Score = 29.1 bits (62), Expect = 4.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 247 HACSVCDKGFATSAEMKAHVR 267
H C +C KGF A ++ H+R
Sbjct: 144 HFCDICGKGFRRDANLRMHMR 164
>01_06_1614 - 38648495-38649706
Length = 403
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 13/77 (16%)
Query: 196 PFKCKY--CPNTFKTYPAMSRHHLVSTALVVVPSSPRRTDPLLCRQVHTGVR---RHACS 250
P++C Y C ++T+ + H V R Q +G R H C
Sbjct: 244 PYRCSYPGCKGEYRTHQGLGGH--------VAGHINREKQAAAAAQGGSGARPEGNHPCK 295
Query: 251 VCDKGFATSAEMKAHVR 267
C K F+T + H+R
Sbjct: 296 TCGKEFSTGVALGGHMR 312
>07_03_1095 + 23926977-23927657
Length = 226
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 9/83 (10%)
Query: 190 IHTGERPFKCKYCPNTFKTYPAMSRHHLVSTALV--VVPSSPRRTDPLLCRQVHTGVRRH 247
+ +R ++C C + Y A+ H L VV +D + V+ H
Sbjct: 90 VKPSQRAYECSVCGKVYWCYQALGGHMTCHRNLFAQVVAGDELSSDRTMV------VKGH 143
Query: 248 ACSVCDKGFATSAEMKAHVRTVH 270
CS+C F + + H+R VH
Sbjct: 144 KCSICRLEFPSGQALGGHMR-VH 165
>02_02_0525 - 11182043-11182080,11182386-11182511,11182760-11183486
Length = 296
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 247 HACSVCDKGFATSAEMKAHVR 267
H C+VC +GFAT + H R
Sbjct: 167 HKCAVCHRGFATGQALGGHKR 187
>12_02_0916 - 24271151-24271894
Length = 247
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 243 GVRRHACSVCDKGFATSAEMKAHVR 267
G R H C+VC K F T + H R
Sbjct: 151 GGRAHECNVCGKAFPTGQALGGHKR 175
>06_01_0939 +
7232682-7232933,7233048-7233228,7233354-7233463,
7233833-7233911,7233979-7234046,7234129-7234195,
7234704-7234834
Length = 295
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 109 FDLPMFSLRIVTPRSLRPQDQYHMVYHQRIHTGEKPYACSECPKRFRMPEQLQVSAALYC 168
F LP L R Q +Y +++H R HT P A + R +Q QVS +
Sbjct: 19 FLLPHLFLGRRRHRHRHDQVRYTILHHPRTHTTAAPPAAAASTTRLSPSQQRQVSLYVDA 78
Query: 169 LI 170
L+
Sbjct: 79 LL 80
>01_06_1495 + 37769982-37771496
Length = 504
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 247 HACSVCDKGFATSAEMKAHVR 267
H C +C KGF A ++ H+R
Sbjct: 264 HFCLICGKGFKRDANLRMHMR 284
>05_05_0115 - 22493350-22493874
Length = 174
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 16 HVCEYCKFRFKERSNLSGHYRRH 38
H+C C F+ L GH RRH
Sbjct: 90 HLCAVCGVEFRMGQALGGHMRRH 112
>02_05_0201 + 26687369-26689228
Length = 619
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 246 RHACSVCDKGFATSAEMKAHVR 267
RH C VC KGF + H+R
Sbjct: 36 RHHCKVCKKGFMCGRALGGHMR 57
>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 19 EYCKFRFKERSNLSGHYRRHHKYKY 43
EY K R +R + +GH+R HH++ +
Sbjct: 1299 EYEKVRNGKRPHKTGHHRHHHRHHH 1323
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.325 0.135 0.438
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,571,420
Number of Sequences: 37544
Number of extensions: 364593
Number of successful extensions: 1363
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1226
Number of HSP's gapped (non-prelim): 156
length of query: 287
length of database: 14,793,348
effective HSP length: 81
effective length of query: 206
effective length of database: 11,752,284
effective search space: 2420970504
effective search space used: 2420970504
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 59 (27.9 bits)
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