BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001718-TA|BGIBMGA001718-PA|undefined (247 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q96H12 Cluster: UPF0439 protein C9orf30; n=11; Amniota|... 41 0.025 UniRef50_Q28J92 Cluster: UPF0439 protein C9orf30 homolog; n=3; T... 40 0.044 UniRef50_Q966Q0 Cluster: Putative uncharacterized protein; n=2; ... 33 6.7 UniRef50_Q966P9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7 UniRef50_Q17IR4 Cluster: Putative uncharacterized protein; n=2; ... 33 6.7 UniRef50_A2EUZ9 Cluster: Kelch motif family protein; n=1; Tricho... 33 8.8 >UniRef50_Q96H12 Cluster: UPF0439 protein C9orf30; n=11; Amniota|Rep: UPF0439 protein C9orf30 - Homo sapiens (Human) Length = 275 Score = 41.1 bits (92), Expect = 0.025 Identities = 15/30 (50%), Positives = 23/30 (76%) Query: 4 RSEAQLKKCWDNLKTRRKHFLANEKRQRMK 33 R QLKKCW+N+K R K +A+E+R+++K Sbjct: 65 RDFKQLKKCWENIKARTKKIMAHERREKVK 94 >UniRef50_Q28J92 Cluster: UPF0439 protein C9orf30 homolog; n=3; Tetrapoda|Rep: UPF0439 protein C9orf30 homolog - Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) Length = 365 Score = 40.3 bits (90), Expect = 0.044 Identities = 16/33 (48%), Positives = 23/33 (69%) Query: 4 RSEAQLKKCWDNLKTRRKHFLANEKRQRMKTGG 36 R QLKKCW+N+K R K +A+E+R++ K G Sbjct: 65 RDFKQLKKCWENIKARTKKIMAHERREKGKLFG 97 >UniRef50_Q966Q0 Cluster: Putative uncharacterized protein; n=2; Caenorhabditis|Rep: Putative uncharacterized protein - Caenorhabditis elegans Length = 1148 Score = 33.1 bits (72), Expect = 6.7 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Query: 2 HKRSEAQLKKCWDNLKTRRKHFLANEKRQRMKTGGGQCI--PNEPQPGSSNETLIFAEVL 59 H ++ +C DN RK F EK + +C+ P+E +P ++ F E Sbjct: 977 HWSKWSEWSRCHDNSTRERKRFCVGEKGSEL-VSNCECLGKPHEEEPCNATG---FIEQS 1032 Query: 60 LDQTDVELRGVIDSDTIYSSEGGNVRTRVIQEE 92 ++TD E+ +D + GG+V +EE Sbjct: 1033 NEETDREIENNLDKLLEEDNAGGDVELHKKKEE 1065 >UniRef50_Q966P9 Cluster: Putative uncharacterized protein; n=1; Caenorhabditis elegans|Rep: Putative uncharacterized protein - Caenorhabditis elegans Length = 1121 Score = 33.1 bits (72), Expect = 6.7 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Query: 2 HKRSEAQLKKCWDNLKTRRKHFLANEKRQRMKTGGGQCI--PNEPQPGSSNETLIFAEVL 59 H ++ +C DN RK F EK + +C+ P+E +P ++ F E Sbjct: 950 HWSKWSEWSRCHDNSTRERKRFCVGEKGSEL-VSNCECLGKPHEEEPCNATG---FIEQS 1005 Query: 60 LDQTDVELRGVIDSDTIYSSEGGNVRTRVIQEE 92 ++TD E+ +D + GG+V +EE Sbjct: 1006 NEETDREIENNLDKLLEEDNAGGDVELHKKKEE 1038 >UniRef50_Q17IR4 Cluster: Putative uncharacterized protein; n=2; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito) Length = 287 Score = 33.1 bits (72), Expect = 6.7 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Query: 4 RSEAQLKKCWDNLKTRRKHFLANEKRQRMKTGGGQCIPNEPQPGSSNETLIFAEVLLDQT 63 RS + +K W + K + K+ L + KR+ TGGG PN+ + S E + + LD+T Sbjct: 64 RSPKEWQKVWTDFKLKIKNKLVHNKREANATGGG---PNKMKVLSPIEEAVAKLLSLDKT 120 >UniRef50_A2EUZ9 Cluster: Kelch motif family protein; n=1; Trichomonas vaginalis G3|Rep: Kelch motif family protein - Trichomonas vaginalis G3 Length = 1419 Score = 32.7 bits (71), Expect = 8.8 Identities = 17/40 (42%), Positives = 24/40 (60%) Query: 114 QKKEREWMMKAAEEVYLKAKAEREAAEDIKKYNQAKRDCR 153 QK+E E K EE LK + ER+AAE+ K +A+R + Sbjct: 918 QKEEEERKQKEEEERKLKEEQERKAAEEKKAKEEAERKAK 957 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.316 0.130 0.380 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 181,218,652 Number of Sequences: 1657284 Number of extensions: 5866321 Number of successful extensions: 18532 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 18514 Number of HSP's gapped (non-prelim): 21 length of query: 247 length of database: 575,637,011 effective HSP length: 99 effective length of query: 148 effective length of database: 411,565,895 effective search space: 60911752460 effective search space used: 60911752460 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 71 (32.7 bits)
- SilkBase 1999-2023 -