GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001718-TA|BGIBMGA001718-PA|undefined
         (247 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   3.8  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   3.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   3.8  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)

Query: 123 KAAEEVYLKAK--AEREAAEDIKKY 145
           KA E++  + K  AE+E AE +K+Y
Sbjct: 49  KAVEKLLTEQKELAEKEEAETLKRY 73


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)

Query: 123 KAAEEVYLKAK--AEREAAEDIKKY 145
           KA E++  + K  AE+E AE +K+Y
Sbjct: 209 KAVEKLLTEQKELAEKEEAETLKRY 233


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)

Query: 123 KAAEEVYLKAK--AEREAAEDIKKY 145
           KA E++  + K  AE+E AE +K+Y
Sbjct: 209 KAVEKLLTEQKELAEKEEAETLKRY 233


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.130    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,452
Number of Sequences: 317
Number of extensions: 1073
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 3
length of query: 247
length of database: 114,650
effective HSP length: 55
effective length of query: 192
effective length of database: 97,215
effective search space: 18665280
effective search space used: 18665280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)