GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001718-TA|BGIBMGA001718-PA|undefined
         (247 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   8.3  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   8.3  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 137 EAAEDIKKYNQAKRDCRNVAGTTPMHYSL 165
           +AA+ I+K  QA+R C   +     +YS+
Sbjct: 332 DAADQIRKVAQAQRQCVFASEANLSYYSV 360


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 137 EAAEDIKKYNQAKRDCRNVAGTTPMHYSL 165
           +AA+ I+K  QA+R C   +     +YS+
Sbjct: 332 DAADQIRKVAQAQRQCVFASEANLSYYSV 360


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.130    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,321
Number of Sequences: 2123
Number of extensions: 4911
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 2
length of query: 247
length of database: 516,269
effective HSP length: 62
effective length of query: 185
effective length of database: 384,643
effective search space: 71158955
effective search space used: 71158955
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)