GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001718-TA|BGIBMGA001718-PA|undefined
         (247 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008993-1|AAH08993.1|  275|Homo sapiens chromosome 9 open readi...    41   0.004
AY598327-1|AAT06738.1|  275|Homo sapiens L8 protein.                   41   0.004
AL353805-6|CAI12542.1|  275|Homo sapiens chromosome 9 open readi...    41   0.004
AL353805-5|CAI12541.1|  181|Homo sapiens chromosome 9 open readi...    41   0.004
AL353805-4|CAI12540.1|  159|Homo sapiens chromosome 9 open readi...    41   0.004
AL353805-3|CAI12539.1|  134|Homo sapiens chromosome 9 open readi...    41   0.004

>BC008993-1|AAH08993.1|  275|Homo sapiens chromosome 9 open
          reading frame 30 protein.
          Length = 275

 Score = 41.1 bits (92), Expect = 0.004
 Identities = 15/30 (50%), Positives = 23/30 (76%)

Query: 4  RSEAQLKKCWDNLKTRRKHFLANEKRQRMK 33
          R   QLKKCW+N+K R K  +A+E+R+++K
Sbjct: 65 RDFKQLKKCWENIKARTKKIMAHERREKVK 94


>AY598327-1|AAT06738.1|  275|Homo sapiens L8 protein.
          Length = 275

 Score = 41.1 bits (92), Expect = 0.004
 Identities = 15/30 (50%), Positives = 23/30 (76%)

Query: 4  RSEAQLKKCWDNLKTRRKHFLANEKRQRMK 33
          R   QLKKCW+N+K R K  +A+E+R+++K
Sbjct: 65 RDFKQLKKCWENIKARTKKIMAHERREKVK 94


>AL353805-6|CAI12542.1|  275|Homo sapiens chromosome 9 open
          reading frame 30 protein.
          Length = 275

 Score = 41.1 bits (92), Expect = 0.004
 Identities = 15/30 (50%), Positives = 23/30 (76%)

Query: 4  RSEAQLKKCWDNLKTRRKHFLANEKRQRMK 33
          R   QLKKCW+N+K R K  +A+E+R+++K
Sbjct: 65 RDFKQLKKCWENIKARTKKIMAHERREKVK 94


>AL353805-5|CAI12541.1|  181|Homo sapiens chromosome 9 open
          reading frame 30 protein.
          Length = 181

 Score = 41.1 bits (92), Expect = 0.004
 Identities = 15/30 (50%), Positives = 23/30 (76%)

Query: 4  RSEAQLKKCWDNLKTRRKHFLANEKRQRMK 33
          R   QLKKCW+N+K R K  +A+E+R+++K
Sbjct: 65 RDFKQLKKCWENIKARTKKIMAHERREKVK 94


>AL353805-4|CAI12540.1|  159|Homo sapiens chromosome 9 open
          reading frame 30 protein.
          Length = 159

 Score = 41.1 bits (92), Expect = 0.004
 Identities = 15/30 (50%), Positives = 23/30 (76%)

Query: 4  RSEAQLKKCWDNLKTRRKHFLANEKRQRMK 33
          R   QLKKCW+N+K R K  +A+E+R+++K
Sbjct: 65 RDFKQLKKCWENIKARTKKIMAHERREKVK 94


>AL353805-3|CAI12539.1|  134|Homo sapiens chromosome 9 open
          reading frame 30 protein.
          Length = 134

 Score = 41.1 bits (92), Expect = 0.004
 Identities = 15/30 (50%), Positives = 23/30 (76%)

Query: 4  RSEAQLKKCWDNLKTRRKHFLANEKRQRMK 33
          R   QLKKCW+N+K R K  +A+E+R+++K
Sbjct: 65 RDFKQLKKCWENIKARTKKIMAHERREKVK 94


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.316    0.130    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,433,050
Number of Sequences: 224733
Number of extensions: 793625
Number of successful extensions: 2190
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2184
Number of HSP's gapped (non-prelim): 6
length of query: 247
length of database: 73,234,838
effective HSP length: 88
effective length of query: 159
effective length of database: 53,458,334
effective search space: 8499875106
effective search space used: 8499875106
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)