Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001717-TA|BGIBMGA001717-PA|IPR004457|Zinc finger,
ZPR1-type
(479 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g37340.1 68418.m04484 zinc finger (ZPR1-type) family protein ... 214 9e-56
At5g22480.1 68418.m02623 zinc finger (ZPR1-type) family protein ... 212 4e-55
At5g37340.2 68418.m04485 zinc finger (ZPR1-type) family protein ... 196 3e-50
At2g24650.1 68415.m02944 transcriptional factor B3 family protei... 33 0.42
At1g31090.1 68414.m03806 F-box family protein contains Pfam PF00... 31 2.2
At5g52280.1 68418.m06488 protein transport protein-related low s... 30 3.9
At5g45310.1 68418.m05562 expressed protein 29 5.1
At2g03640.1 68415.m00324 nuclear transport factor 2 (NTF2) famil... 29 5.1
At2g45250.1 68415.m05633 expressed protein 29 6.8
At5g17880.1 68418.m02097 disease resistance protein (TIR-NBS-LRR... 29 9.0
At2g48160.1 68415.m06031 PWWP domain-containing protein 29 9.0
>At5g37340.1 68418.m04484 zinc finger (ZPR1-type) family protein
contains similarity to zinc-finger protein ZPR1 (Zinc
finger protein 259) [Mus musculus] SWISS-PROT:Q62384
Length = 493
Score = 214 bits (523), Expect = 9e-56
Identities = 118/320 (36%), Positives = 173/320 (54%), Gaps = 20/320 (6%)
Query: 2 TRVLLTRIPHYKNVVIMSFSCEECGYQNNEIQPGGEYEELGVRWKLRVESQ--QDLNRQV 59
TR LLT IPH++ V+I +F C CG +NNE+Q GE + G + L V + + +RQV
Sbjct: 44 TRFLLTLIPHFRKVLISAFECPHCGERNNEVQFAGEIQPRGCSYHLEVSAGDVKTFDRQV 103
Query: 60 VKSDYTSVRIPELDFEIAAQSQKGEVTTVEGIISRAITGLNQDQESRRSQHPDAAAKIDE 119
VKS+ +++IPELDFEI ++Q G ++TVEGI+SRA L+ QE RR P A ID+
Sbjct: 104 VKSESATIKIPELDFEIPPEAQSGSLSTVEGILSRAADELSALQEERRKVDPKTAEAIDQ 163
Query: 120 FVSKLQALKDLSTPWTLQLEDISGNCFIENPQMPKKDPRCERTDFKRSKAQNHQLGIFMH 179
F+SKL+A T +T L+D +GN FIENP P DP ++R+ Q LG +
Sbjct: 164 FLSKLRACAKAETSFTFILDDPAGNSFIENPHAPSLDPSLTIKFYERTPEQQATLGYLTN 223
Query: 180 DEVQDDLTPTPLTPFSEKLLTP------------------ADPAECSLEQMTADEVLQFR 221
+ TP ++ P D ++ +EV+ F
Sbjct: 224 PSQTGQSERSLGTPSTQTTALPHGTIGATAGHRAIAQSNSTDISDNLFRYSAPEEVMTFP 283
Query: 222 TNCPDCNSPANTNMKITKIPHFKEVVIMATTCDYCGHRTNEVKSGGGIEDMGVRFEVRVA 281
+ C C T M +TKIP+F+EV++MA+TCD CG+R +E+K GG I + G + + V
Sbjct: 284 STCGACTKLCETRMFVTKIPYFQEVIVMASTCDDCGYRNSELKPGGAIPEKGKKITLSVK 343
Query: 282 TKDDFSRDILKIVNVVLHVP 301
D SRD++K + +P
Sbjct: 344 NITDLSRDVIKSDTAGVKIP 363
Score = 122 bits (293), Expect = 7e-28
Identities = 67/178 (37%), Positives = 104/178 (58%), Gaps = 3/178 (1%)
Query: 2 TRVLLTRIPHYKNVVIMSFSCEECGYQNNEIQPGGEYEELGVRWKLRVESQQDLNRQVVK 61
TR+ +T+IP+++ V++M+ +C++CGY+N+E++PGG E G + L V++ DL+R V+K
Sbjct: 295 TRMFVTKIPYFQEVIVMASTCDDCGYRNSELKPGGAIPEKGKKITLSVKNITDLSRDVIK 354
Query: 62 SDYTSVRIPELDFEIAAQSQKGEVTTVEGIISRAITGLNQDQ--ESRRSQHPDAAAKIDE 119
SD V+IPELD E+A + G VTTVEG++++ L + S K E
Sbjct: 355 SDTAGVKIPELDLELAGGTLGGMVTTVEGLVTQIRESLARVHGFTFGDSLEQSKINKWKE 414
Query: 120 FVSKLQALKDLSTPWTLQLEDISGNCFIEN-PQMPKKDPRCERTDFKRSKAQNHQLGI 176
F S+L L L WTL L+D N FI K D + +++RS QN +LG+
Sbjct: 415 FGSRLTKLLSLEQEWTLILDDELANSFISPVTDDIKDDHQLTFEEYERSWEQNEELGL 472
Score = 60.5 bits (140), Expect = 2e-09
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 224 CPDCNSPANTNMKITKIPHFKEVVIMATTCDYCGHRTNEVKSGGGIEDMGVRFEVRVATK 283
C C T +T IPHF++V+I A C +CG R NEV+ G I+ G + + V+
Sbjct: 35 CMRCGENGTTRFLLTLIPHFRKVLISAFECPHCGERNNEVQFAGEIQPRGCSYHLEVSAG 94
Query: 284 D--DFSRDILKIVNVVLHVP 301
D F R ++K + + +P
Sbjct: 95 DVKTFDRQVVKSESATIKIP 114
Score = 40.7 bits (91), Expect = 0.002
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 27/94 (28%)
Query: 382 RRFIERLTDVLELKEPVTVVLDDPAGNSYVQSLADDPLTPDDGEPAGPSPYLAAPPGDPL 441
+ F RLT +L L++ T++LDD NS++ + DD DD +
Sbjct: 413 KEFGSRLTKLLSLEQEWTLILDDELANSFISPVTDD--IKDDHQ---------------- 454
Query: 442 SFTINIISGLKVERYVRTFEQNEELGLNDMKTEN 475
L E Y R++EQNEELGLND+ T +
Sbjct: 455 ---------LTFEEYERSWEQNEELGLNDIDTSS 479
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 383 RFIERLTDVLELKEPVTVVLDDPAGNSYVQSLADDPLTP 421
+F+ +L + + T +LDDPAGNS++++ L P
Sbjct: 163 QFLSKLRACAKAETSFTFILDDPAGNSFIENPHAPSLDP 201
>At5g22480.1 68418.m02623 zinc finger (ZPR1-type) family protein
contains Pfam doamin, PF03367: ZPR1 zinc-finger domain
Length = 493
Score = 212 bits (518), Expect = 4e-55
Identities = 117/311 (37%), Positives = 175/311 (56%), Gaps = 20/311 (6%)
Query: 2 TRVLLTRIPHYKNVVIMSFSCEECGYQNNEIQPGGEYEELGVRWKLRVESQ--QDLNRQV 59
TR LLT IPH++ V+I +F C CG +NNE+Q GE + G + L V + + +RQV
Sbjct: 44 TRFLLTLIPHFRKVLISAFECPHCGERNNEVQFAGEIQPRGCCYNLEVLAGDVKIFDRQV 103
Query: 60 VKSDYTSVRIPELDFEIAAQSQKGEVTTVEGIISRAITGLNQDQESRRSQHPDAAAKIDE 119
VKS+ +++IPELDFEI ++Q+G ++TVEGI++RA L+ QE R+ P A ID+
Sbjct: 104 VKSESATIKIPELDFEIPPEAQRGSLSTVEGILARAADELSALQEERKKVDPKTAEAIDQ 163
Query: 120 FVSKLQALKDLSTPWTLQLEDISGNCFIENPQMPKKDPRCERTDFKRSKAQNHQLGIFMH 179
F+SKL+A T +T L+D +GN FIENP P DP ++R+ Q LG +
Sbjct: 164 FLSKLRACAKAETSFTFILDDPAGNSFIENPHAPSPDPSLTIKFYERTPEQQATLGYVAN 223
Query: 180 ----DEVQDDL----TPTPLTP-------FSEKLLTPADPAECS---LEQMTADEVLQFR 221
+ + L T T P + + ++ + S +EV+ F
Sbjct: 224 PSQAGQSEGSLGAPSTKTAYVPNGTIGATAGHRAIAQSNSTDISDNLFRYSAPEEVMTFP 283
Query: 222 TNCPDCNSPANTNMKITKIPHFKEVVIMATTCDYCGHRTNEVKSGGGIEDMGVRFEVRVA 281
+ C C P T M +TKIP+F+EV++MA+TCD CG+R +E+K GG I + G + + V
Sbjct: 284 STCGACTEPCETRMFVTKIPYFQEVIVMASTCDSCGYRNSELKPGGAIPEKGKKITLSVR 343
Query: 282 TKDDFSRDILK 292
D SRD++K
Sbjct: 344 NITDLSRDVIK 354
Score = 118 bits (285), Expect = 6e-27
Identities = 66/178 (37%), Positives = 101/178 (56%), Gaps = 3/178 (1%)
Query: 2 TRVLLTRIPHYKNVVIMSFSCEECGYQNNEIQPGGEYEELGVRWKLRVESQQDLNRQVVK 61
TR+ +T+IP+++ V++M+ +C+ CGY+N+E++PGG E G + L V + DL+R V+K
Sbjct: 295 TRMFVTKIPYFQEVIVMASTCDSCGYRNSELKPGGAIPEKGKKITLSVRNITDLSRDVIK 354
Query: 62 SDYTSVRIPELDFEIAAQSQKGEVTTVEGIISRAITGLNQDQ--ESRRSQHPDAAAKIDE 119
SD V IPELD E+A + G VTTVEG++++ L + S K E
Sbjct: 355 SDTAGVIIPELDLELAGGTLGGMVTTVEGLVTQIRESLARVHGFTFGDSMEESKLNKWRE 414
Query: 120 FVSKLQALKDLSTPWTLQLEDISGNCFIEN-PQMPKKDPRCERTDFKRSKAQNHQLGI 176
F ++L L PWTL L+D N FI K D + +++RS QN +LG+
Sbjct: 415 FGARLTKLLSFEQPWTLILDDELANSFIAPVTDDIKDDHQLTFEEYERSWDQNEELGL 472
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 224 CPDCNSPANTNMKITKIPHFKEVVIMATTCDYCGHRTNEVKSGGGIEDMGVRFEVRVATK 283
C C T +T IPHF++V+I A C +CG R NEV+ G I+ G + + V
Sbjct: 35 CMRCQENGTTRFLLTLIPHFRKVLISAFECPHCGERNNEVQFAGEIQPRGCCYNLEVLAG 94
Query: 284 D--DFSRDILKIVNVVLHVP 301
D F R ++K + + +P
Sbjct: 95 DVKIFDRQVVKSESATIKIP 114
Score = 41.5 bits (93), Expect = 0.001
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 27/94 (28%)
Query: 382 RRFIERLTDVLELKEPVTVVLDDPAGNSYVQSLADDPLTPDDGEPAGPSPYLAAPPGDPL 441
R F RLT +L ++P T++LDD NS++ + DD DD +
Sbjct: 413 REFGARLTKLLSFEQPWTLILDDELANSFIAPVTDD--IKDDHQ---------------- 454
Query: 442 SFTINIISGLKVERYVRTFEQNEELGLNDMKTEN 475
L E Y R+++QNEELGLND+ T +
Sbjct: 455 ---------LTFEEYERSWDQNEELGLNDIDTSS 479
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 383 RFIERLTDVLELKEPVTVVLDDPAGNSYVQS 413
+F+ +L + + T +LDDPAGNS++++
Sbjct: 163 QFLSKLRACAKAETSFTFILDDPAGNSFIEN 193
>At5g37340.2 68418.m04485 zinc finger (ZPR1-type) family protein
contains similarity to zinc-finger protein ZPR1 (Zinc
finger protein 259) [Mus musculus] SWISS-PROT:Q62384
Length = 498
Score = 196 bits (478), Expect = 3e-50
Identities = 115/325 (35%), Positives = 168/325 (51%), Gaps = 25/325 (7%)
Query: 2 TRVLLTRIPHYKNVVIMSFSCEECGYQNNEIQPGGEYEELGVRWKLRVESQ--QDLNRQV 59
TR LLT IPH++ V+I +F C CG +NNE+Q GE + G + L V + + +RQV
Sbjct: 44 TRFLLTLIPHFRKVLISAFECPHCGERNNEVQFAGEIQPRGCSYHLEVSAGDVKTFDRQV 103
Query: 60 VKSDYTSVRIPELDFEIAAQSQKGEVTTVEGIISRAITGLNQDQESRRSQHPDAAAKIDE 119
VKS+ +++IPELDFEI ++Q G ++TVEGI+SRA L+ QE RR P A ID+
Sbjct: 104 VKSESATIKIPELDFEIPPEAQSGSLSTVEGILSRAADELSALQEERRKVDPKTAEAIDQ 163
Query: 120 FVSKLQALKDLSTPWTLQLEDISGNCFIENPQMPKKDPRCERTDFKRSKAQNHQLGIFMH 179
F+SKL+A T +T L+D +GN FIENP P DP ++R+ Q LG +
Sbjct: 164 FLSKLRACAKAETSFTFILDDPAGNSFIENPHAPSLDPSLTIKFYERTPEQQATLGYLTN 223
Query: 180 DEVQDDLTPTPLTPFSEKLLTP------------------ADPAECSLEQMTADEVLQFR 221
+ TP ++ P D ++ +EV+ F
Sbjct: 224 PSQTGQSERSLGTPSTQTTALPHGTIGATAGHRAIAQSNSTDISDNLFRYSAPEEVMTFP 283
Query: 222 TNCPDCNSPANTNMKITKI-----PHFKEVVIMATTCDYCGHRTNEVKSGGGIEDMGVRF 276
+ C C T M +T I EV++MA+TCD CG+R +E+K GG I + G +
Sbjct: 284 STCGACTKLCETRMFVTSILSKLCSRSLEVIVMASTCDDCGYRNSELKPGGAIPEKGKKI 343
Query: 277 EVRVATKDDFSRDILKIVNVVLHVP 301
+ V D SRD++K + +P
Sbjct: 344 TLSVKNITDLSRDVIKSDTAGVKIP 368
Score = 107 bits (258), Expect = 1e-23
Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Query: 1 MTRVLLTRIPHYKNVVIMSFSCEECGYQNNEIQPGGEYEELGVRWKLRVESQQDLNRQVV 60
+T +L V++M+ +C++CGY+N+E++PGG E G + L V++ DL+R V+
Sbjct: 299 VTSILSKLCSRSLEVIVMASTCDDCGYRNSELKPGGAIPEKGKKITLSVKNITDLSRDVI 358
Query: 61 KSDYTSVRIPELDFEIAAQSQKGEVTTVEGIISRAITGLNQDQ--ESRRSQHPDAAAKID 118
KSD V+IPELD E+A + G VTTVEG++++ L + S K
Sbjct: 359 KSDTAGVKIPELDLELAGGTLGGMVTTVEGLVTQIRESLARVHGFTFGDSLEQSKINKWK 418
Query: 119 EFVSKLQALKDLSTPWTLQLEDISGNCFIEN-PQMPKKDPRCERTDFKRSKAQNHQLGI 176
EF S+L L L WTL L+D N FI K D + +++RS QN +LG+
Sbjct: 419 EFGSRLTKLLSLEQEWTLILDDELANSFISPVTDDIKDDHQLTFEEYERSWEQNEELGL 477
Score = 60.5 bits (140), Expect = 2e-09
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 224 CPDCNSPANTNMKITKIPHFKEVVIMATTCDYCGHRTNEVKSGGGIEDMGVRFEVRVATK 283
C C T +T IPHF++V+I A C +CG R NEV+ G I+ G + + V+
Sbjct: 35 CMRCGENGTTRFLLTLIPHFRKVLISAFECPHCGERNNEVQFAGEIQPRGCSYHLEVSAG 94
Query: 284 D--DFSRDILKIVNVVLHVP 301
D F R ++K + + +P
Sbjct: 95 DVKTFDRQVVKSESATIKIP 114
Score = 40.7 bits (91), Expect = 0.002
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 27/94 (28%)
Query: 382 RRFIERLTDVLELKEPVTVVLDDPAGNSYVQSLADDPLTPDDGEPAGPSPYLAAPPGDPL 441
+ F RLT +L L++ T++LDD NS++ + DD DD +
Sbjct: 418 KEFGSRLTKLLSLEQEWTLILDDELANSFISPVTDD--IKDDHQ---------------- 459
Query: 442 SFTINIISGLKVERYVRTFEQNEELGLNDMKTEN 475
L E Y R++EQNEELGLND+ T +
Sbjct: 460 ---------LTFEEYERSWEQNEELGLNDIDTSS 484
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 383 RFIERLTDVLELKEPVTVVLDDPAGNSYVQSLADDPLTP 421
+F+ +L + + T +LDDPAGNS++++ L P
Sbjct: 163 QFLSKLRACAKAETSFTFILDDPAGNSFIENPHAPSLDP 201
>At2g24650.1 68415.m02944 transcriptional factor B3 family protein
low similarity to reproductive meristem gene 1 from
[Brassica oleracea var. botrytis] GI:3170424,
[Arabidopsis thaliana] GI:13604227; contains Pfam
profile PF02362: B3 DNA binding domain
Length = 1440
Score = 33.1 bits (72), Expect = 0.42
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 161 RTDFKRSKAQNHQLGIFMHDEVQDDLTPTPLTPFSEKLLTPADPAECSL 209
RT F SK+ N + IF+ + +D +PT + F LTP D C L
Sbjct: 846 RTKFSSSKS-NKEESIFLEPKSRDSSSPTIVNRFVTLALTPEDVTACKL 893
>At1g31090.1 68414.m03806 F-box family protein contains Pfam
PF00646: F-box domain
Length = 311
Score = 30.7 bits (66), Expect = 2.2
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 3 RVLLTRIPHYKNVVIMSFSCEECGYQNNEIQPGGEYEELGVRWKLRVESQQDLNRQVVKS 62
+++L R YK + F+ E+ Q+ EIQ E E+ R V+ +DL V+K+
Sbjct: 220 QIVLARNKAYKPFYVFYFNPEKSTLQSVEIQGVREEEDWFHRVYYFVDHVEDLRFDVMKT 279
Query: 63 DYTSVRIPELDFEIAAQSQKGE-VTTVE 89
Y + I + + S++ V TV+
Sbjct: 280 TYAATSIRPAEQNTSTSSREDHLVRTVK 307
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 29.9 bits (64), Expect = 3.9
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 37 EYEELGVRWKLRVESQQDLNRQVVKSDYTSVRIPELDFEIAAQSQKGEVTTVEGIISRAI 96
E E L + +L +Q L +Q +K S RI EL E++ + + E R
Sbjct: 272 ELEALRRQSELSELEKQSLRKQAIKE---SKRIQELSKEVSCLKGERDGAMEECEKLRLQ 328
Query: 97 TGLNQ-DQESR-RSQHPDAAAKIDEFVSKLQALKDLSTPWTLQLE 139
++ D ESR R D++ I+E +L KDL++ LQL+
Sbjct: 329 NSRDEADAESRLRCISEDSSNMIEEIRDELSCEKDLTSNLKLQLQ 373
>At5g45310.1 68418.m05562 expressed protein
Length = 352
Score = 29.5 bits (63), Expect = 5.1
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 99 LNQDQESRRSQHPDAAAKIDEFVSKLQALKDLSTPWTLQLEDISGNCFIENPQMPKKDPR 158
+ QD + +H +A +KI++ ++LQ LK+ + LQL +++G + + K P
Sbjct: 124 MEQDLDELEDEHDEAISKIEKLEAELQELKEEN----LQLMEVNGKDY--RSKKGKVKPS 177
Query: 159 CERTDFKRSKAQNHQLGIFMHDEVQDDLTPTPLTPFSEKLLTPAD 203
E ++ RS + + + + +PL PF++ + P D
Sbjct: 178 EEPSEI-RSIHKPKNIPYASKGKAEFTSVKSPLYPFAKSTI-PKD 220
>At2g03640.1 68415.m00324 nuclear transport factor 2 (NTF2) family
protein / RNA recognition motif (RRM)-containing
protein contains Pfam profiles PF02136: Nuclear
transport factor 2 (NTF2) domain, PF00076: RNA
recognition motif (a.k.a. RRM, RBD, or RNP domain)
Length = 422
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 49 VESQQDLNRQVVKSDYTSVRIPELDFEIAAQSQKGEVTTVEGII 92
++S + +N Q++ DY S RI L + + + G VT V G++
Sbjct: 56 IKSLKGINDQIMSIDYKSSRIEILTADSQSTLKNGVVTLVTGLV 99
>At2g45250.1 68415.m05633 expressed protein
Length = 204
Score = 29.1 bits (62), Expect = 6.8
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 185 DLTPTPLTPFSEKLLTPADPAECSLEQMTADEVLQFRTNCPDCNSPANTNMKITKIPHFK 244
D +P+P +PFS ++ P + S + + D V P +SPA TN ++ + +
Sbjct: 19 DPSPSP-SPFSSEMEIPEGTPKDSEKAIEQDTVSSIGVKKPPVDSPATTNAASGRLVYVR 77
Query: 245 EVVIMATT 252
V + T+
Sbjct: 78 RRVEVDTS 85
>At5g17880.1 68418.m02097 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1197
Score = 28.7 bits (61), Expect = 9.0
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 16 VIMSFSCEECGYQNNEIQPGGEYEELGVRWKLRVESQQDLNRQVVKSDYTSVRIPE-LDF 74
+I+ FSCE QNN GE + WK+ +QD + V+SD+ + LDF
Sbjct: 1017 LIVKFSCE----QNN-----GEGSSSSITWKVGSLIEQDNQEETVESDHVFIGYTNCLDF 1067
Query: 75 EIAAQSQKG 83
+ Q G
Sbjct: 1068 IKLVKGQGG 1076
>At2g48160.1 68415.m06031 PWWP domain-containing protein
Length = 1366
Score = 28.7 bits (61), Expect = 9.0
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 135 TLQLEDISGNCFIENPQMPKKDPRCERTD-FKRSKAQNHQLG-----IFMHDEVQDDLTP 188
TL LED+ G +E+ P C TD +K N QLG +F L+
Sbjct: 1078 TLILEDVDGELEMEDVAPPWGTENCTHTDQADNTKVSNCQLGQQHRPVFGTSHQHMSLSS 1137
Query: 189 TPLTPFSEKLLTPADPAE 206
PL P S PA P++
Sbjct: 1138 PPL-PSSSPPPPPAPPSQ 1154
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.134 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,360,238
Number of Sequences: 28952
Number of extensions: 479808
Number of successful extensions: 1281
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1251
Number of HSP's gapped (non-prelim): 27
length of query: 479
length of database: 12,070,560
effective HSP length: 84
effective length of query: 395
effective length of database: 9,638,592
effective search space: 3807243840
effective search space used: 3807243840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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