Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001717-TA|BGIBMGA001717-PA|IPR004457|Zinc finger,
ZPR1-type
(479 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce... 222 1e-58
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 36 0.016
SPBC17G9.12c |||conserved fungal protein|Schizosaccharomyces pom... 29 1.9
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 28 3.3
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 5.8
SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ... 27 7.6
SPBC146.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 7.6
>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 459
Score = 222 bits (542), Expect = 1e-58
Identities = 118/301 (39%), Positives = 179/301 (59%), Gaps = 12/301 (3%)
Query: 2 TRVLLTRIPHYKNVVIMSFSCEECGYQNNEIQPGGEYEELGVRWKLRVESQQDLNRQVVK 61
T++LLT IP+++ VV+MSF C CG++N ++Q + G + VE ++DLNR VVK
Sbjct: 47 TKLLLTVIPYFREVVLMSFECPHCGFKNAQVQHAETIQPEGSKITFHVEDKEDLNRTVVK 106
Query: 62 SDYTSVRIPELDFEIAAQSQKGEVTTVEGIISRAITGLNQDQESRRSQHPDAAAKIDEFV 121
S V IPE+ EI + G++TT+EGI+S + L+++QESR+ P +I+ F+
Sbjct: 107 SQEAIVSIPEIQLEIPGRL--GQLTTIEGILSNVVDDLSKEQESRKESAPQLYDQINAFI 164
Query: 122 SKLQALKDLSTPWTLQLEDISGNCFIENPQMPKKD-PRCERTDFKRSKAQNHQLGIFMHD 180
K+ +L+ S P+T+ ++DI+GN +IE P +D R + +KR+ QN +LG+ D
Sbjct: 165 EKVNSLRSGSVPFTITVDDITGNSWIE--MKPGRDGDRWSQVSYKRTLEQNTKLGLVDTD 222
Query: 181 EVQDDLTPTPLTPFSEKLLTPADPAECSLEQMTADEVLQFRTNCPDCNSPANTNMKITKI 240
+ +D T T S L A E + +EV F CP C+ +T+MK+ I
Sbjct: 223 QPEDVKTQT--NNASNTLKHDATAVE-----VDPNEVHTFHATCPSCSHQCDTHMKLLDI 275
Query: 241 PHFKEVVIMATTCDYCGHRTNEVKSGGGIEDMGVRFEVRVATKDDFSRDILKIVNVVLHV 300
PHFKEV+IM+T CD CG+R+NEVK+GG I G + ++V +D SRDILK L +
Sbjct: 276 PHFKEVIIMSTVCDRCGYRSNEVKTGGEIPPKGRKITLKVMDAEDLSRDILKSETASLKI 335
Query: 301 P 301
P
Sbjct: 336 P 336
Score = 116 bits (278), Expect = 1e-26
Identities = 58/177 (32%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 2 TRVLLTRIPHYKNVVIMSFSCEECGYQNNEIQPGGEYEELGVRWKLRVESQQDLNRQVVK 61
T + L IPH+K V+IMS C+ CGY++NE++ GGE G + L+V +DL+R ++K
Sbjct: 268 THMKLLDIPHFKEVIIMSTVCDRCGYRSNEVKTGGEIPPKGRKITLKVMDAEDLSRDILK 327
Query: 62 SDYTSVRIPELDFEIAAQSQKGEVTTVEGIISRAITGL--NQDQESRRSQHPDAAAKIDE 119
S+ S++IPEL ++ + G TT+EG++++ L + S P+ A +
Sbjct: 328 SETASLKIPELGLDLFPGTLGGRFTTIEGLLAQVYDELYGRVFSQETDSMTPEQVANWQQ 387
Query: 120 FVSKLQALKDLSTPWTLQLEDISGNCFIENPQMPKKDPRCERTDFKRSKAQNHQLGI 176
F+ L A ++ +T +TL L+D +++N P DP +++RS N +LG+
Sbjct: 388 FLCNLTAAREGATQFTLILDDPLSQSYLQNYYAPDPDPNMTIEEYERSFQVNEELGL 444
Score = 60.1 bits (139), Expect = 7e-10
Identities = 25/92 (27%), Positives = 48/92 (52%)
Query: 210 EQMTADEVLQFRTNCPDCNSPANTNMKITKIPHFKEVVIMATTCDYCGHRTNEVKSGGGI 269
E + V + + C +C T + +T IP+F+EVV+M+ C +CG + +V+ I
Sbjct: 24 EDREGNGVQEVESLCMECGKNGTTKLLLTVIPYFREVVLMSFECPHCGFKNAQVQHAETI 83
Query: 270 EDMGVRFEVRVATKDDFSRDILKIVNVVLHVP 301
+ G + V K+D +R ++K ++ +P
Sbjct: 84 QPEGSKITFHVEDKEDLNRTVVKSQEAIVSIP 115
Score = 48.0 bits (109), Expect = 3e-06
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 28/109 (25%)
Query: 369 KTSSSLVTYIIITRRFIERLTDVLELKEPVTVVLDDPAGNSYVQSLADDPLTPDDGEPAG 428
+T S + ++F+ LT E T++LDDP SY+Q+
Sbjct: 373 ETDSMTPEQVANWQQFLCNLTAAREGATQFTLILDDPLSQSYLQN--------------- 417
Query: 429 PSPYLAAPPGDPLSFTINIISGLKVERYVRTFEQNEELGLNDMKTENYE 477
Y A P DP + +E Y R+F+ NEELGLNDMKTENYE
Sbjct: 418 ---YYAPDP-DP---------NMTIEEYERSFQVNEELGLNDMKTENYE 453
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 363 DQTSRYKTSSSLVTYIIITRRFIERLTDVLELKEPVTVVLDDPAGNSYVQ 412
+Q SR +++ L I FIE++ + P T+ +DD GNS+++
Sbjct: 145 EQESRKESAPQLYDQI---NAFIEKVNSLRSGSVPFTITVDDITGNSWIE 191
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 35.5 bits (78), Expect = 0.016
Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Query: 328 HDRRGPTARHPGPAPALPCPHRGQRAATRPAAVRSDQTSRYKTSSSLVTYIIITRRFIER 387
H PT+ P PA CP + A A S Q+S++K+ + VT I
Sbjct: 206 HPYSSPTSYPPPLCPATYCPSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINNHTAVP 265
Query: 388 LTDVLELKEPVT-VVLDDPAGNSY-VQSLADDPLTP---DDGEPAGPSPYLAAPP 437
L+ L + P+T P+ N Y S A+ +TP D P A PP
Sbjct: 266 LSPTLAVWLPMTQPTFQPPSANVYQPASNANQVITPVSISDYRPPKKRKRAAWPP 320
>SPBC17G9.12c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 38 YEELGVRWKLRVESQQDLNRQVVKSDYTSVRIPELDFEIAAQSQKGEVTTVEGIISRAIT 97
+ L V W RV Q L+ + +D V + DF+ + + G + S +
Sbjct: 120 FHVLSVNWSARVIEQTLLHHTDLTADLLCVHANDFDFDTSTNTTNGRI-LARNASSLLMN 178
Query: 98 GLNQDQESRRSQHPDAAA 115
++ +E RR DA +
Sbjct: 179 STDKVREFRRIVQTDAVS 196
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 137 QLEDISGNCFIENPQMPKKDPRCERTDFKRS 167
Q D++GN F N KKD + DF+R+
Sbjct: 25 QAVDLNGNAFAPNGTFQKKDLISHKNDFERT 55
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 27.1 bits (57), Expect = 5.8
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 46 KLRVESQQDLNRQVVKSDYTSVRIPELDFEIAAQSQKGEVTTVEGIISR 94
KL +++ + ++K +TS I +LDF S + E V+ I SR
Sbjct: 371 KLSWDAEDPHRKDLIKKAFTSQDIEDLDFSAYIASSESEDEDVDVIRSR 419
>SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 234 NMKITKIP-----HFKEVVIMATTCDYCGHRTNEVKSG 266
N+KI ++P H K+V++ T C C + + SG
Sbjct: 47 NVKIAEVPKPTITHPKDVIVKTTACTICSGSDSHIFSG 84
>SPBC146.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 263
Score = 26.6 bits (56), Expect = 7.6
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 133 PWTLQLEDISGNCFIENPQMPKKDPRCERTDFKRSKAQNHQLGIFMHDEVQDDLTPTPLT 192
P TLQL +I +CFI+ D + +RT + ++ L + H + D+L +
Sbjct: 8 PATLQLHNIKTSCFIDG-----SDDQSDRTRSSSGDSTSNSLKLSHH--ISDEL----IN 56
Query: 193 PFSEKLLTPADPAECSLEQ 211
++L +P P + ++ Q
Sbjct: 57 AIYKELKSPVSPWDKNISQ 75
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.134 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,157,923
Number of Sequences: 5004
Number of extensions: 89242
Number of successful extensions: 236
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 221
Number of HSP's gapped (non-prelim): 13
length of query: 479
length of database: 2,362,478
effective HSP length: 75
effective length of query: 404
effective length of database: 1,987,178
effective search space: 802819912
effective search space used: 802819912
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)
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