GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001717-TA|BGIBMGA001717-PA|IPR004457|Zinc finger,
ZPR1-type
         (479 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    29   0.21 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    28   0.63 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   5.9  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    25   5.9  

>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 29.5 bits (63), Expect = 0.21
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 390 DVLELKEPVTVVLDDPAGNSYVQSLADDPLTPDDGEPAGPS 430
           +++E+ EP  VVL D  GN+ V+   DD +  +DG   G S
Sbjct: 112 NLVEVYEPPPVVLID-TGNNVVEVNTDDQIVLEDGSVEGES 151


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 27.9 bits (59), Expect = 0.63
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 92   ISRAITGLNQDQESRRSQHPDAAAKIDEFVSKLQALKDLSTPWTLQLEDISGNCFIENPQ 151
            I + I  L + +   + +  +    +    +KLQ  KD    W LQL+ +      E P+
Sbjct: 989  IKKEIVALQKREAEGKMKRLEFEQILQTIETKLQETKDTLPHWQLQLKPLK---LHEIPE 1045

Query: 152  MPKKDPRCERTD 163
             P ++P  E T+
Sbjct: 1046 EPPQEPLKEYTE 1057


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 5.9
 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 415 ADDPLTPDDGEPAGPSPYLAAPPGD 439
           A DP  P+ G P  P P +  PPG+
Sbjct: 175 AMDPARPNPGMP--PGPQMMRPPGN 197


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 24.6 bits (51), Expect = 5.9
 Identities = 15/50 (30%), Positives = 21/50 (42%)

Query: 334 TARHPGPAPALPCPHRGQRAATRPAAVRSDQTSRYKTSSSLVTYIIITRR 383
           T   P PAPA+       R + RP  V    T++  T++   T    T R
Sbjct: 677 TTASPAPAPAIRSRFGDNRPSWRPLIVPHATTTKTPTTTPPATTTSTTPR 726


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.134    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,515
Number of Sequences: 2123
Number of extensions: 21775
Number of successful extensions: 39
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 37
Number of HSP's gapped (non-prelim): 6
length of query: 479
length of database: 516,269
effective HSP length: 67
effective length of query: 412
effective length of database: 374,028
effective search space: 154099536
effective search space used: 154099536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)