BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001715-TA|BGIBMGA001715-PA|IPR013069|BTB/POZ, IPR000210|BTB (517 letters) Database: bee 429 sequences; 140,377 total letters Searching.....................................................done Score E Sequences producing significant alignments: (bits) Value AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 40 5e-05 AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 29 0.093 DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 27 0.28 AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 27 0.28 AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 6.1 >AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. Length = 429 Score = 39.9 bits (89), Expect = 5e-05 Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 4/68 (5%) Query: 162 DVELIGAGWSLAAHRAVLAARSHYFRDLLRGRPPGFCRVPLEGAGASLSREELVAGVRML 221 DV L G SL AHR VL+A S YFR+LL+ P C+ P+ ++ +L A V + Sbjct: 33 DVTLACDGRSLKAHRVVLSACSPYFRELLKSTP---CKHPVI-VLQDVAFSDLHALVEFI 88 Query: 222 YSGPLYCH 229 Y G + H Sbjct: 89 YHGEVNVH 96 >AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. Length = 652 Score = 29.1 bits (62), Expect = 0.093 Identities = 16/33 (48%), Positives = 19/33 (57%) Query: 162 DVELIGAGWSLAAHRAVLAARSHYFRDLLRGRP 194 DV L SL AH+ VL+A S YF+ LL P Sbjct: 37 DVTLACNEASLKAHKVVLSACSSYFQKLLLSNP 69 >DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate receptor protein. Length = 322 Score = 27.5 bits (58), Expect = 0.28 Identities = 14/36 (38%), Positives = 19/36 (52%) Query: 278 RRFAKALLHAAYTDQPNLVWHTAHSASRRGTRRREL 313 R F + LLH A D P LV H R ++R+E+ Sbjct: 125 RTFLRVLLHLAMHDYPPLVSGALHLLFRHFSQRQEV 160 >AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-triphosphate recepter protein. Length = 178 Score = 27.5 bits (58), Expect = 0.28 Identities = 14/36 (38%), Positives = 19/36 (52%) Query: 278 RRFAKALLHAAYTDQPNLVWHTAHSASRRGTRRREL 313 R F + LLH A D P LV H R ++R+E+ Sbjct: 93 RTFLRVLLHLAMHDYPPLVSGALHLLFRHFSQRQEV 128 >AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. Length = 349 Score = 23.0 bits (47), Expect = 6.1 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%) Query: 481 RDRTKTTPRPAGTVETS-PHVSLALSKTD 508 RDR KT+ RP T+ET +SL+L D Sbjct: 322 RDRNKTSARPT-TIETRVTPLSLSLKLLD 349 Database: bee Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 140,377 Number of sequences in database: 429 Lambda K H 0.320 0.134 0.425 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 129,559 Number of Sequences: 429 Number of extensions: 4142 Number of successful extensions: 11 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 7 Number of HSP's gapped (non-prelim): 5 length of query: 517 length of database: 140,377 effective HSP length: 61 effective length of query: 456 effective length of database: 114,208 effective search space: 52078848 effective search space used: 52078848 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 46 (22.6 bits)
- SilkBase 1999-2023 -