GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001715-TA|BGIBMGA001715-PA|IPR013069|BTB/POZ,
IPR000210|BTB
         (517 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   2.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   2.1  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   2.1  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    26   2.1  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           25   6.5  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 161 CDVELIGAGWSLAAHRAVLAARSHYFRDL 189
           CDV L      + AH+A+L+A S YF  +
Sbjct: 78  CDVTLACEKGMVKAHQAILSACSPYFEQI 106


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 161 CDVELIGAGWSLAAHRAVLAARSHYFRDL 189
           CDV L      + AH+A+L+A S YF  +
Sbjct: 78  CDVTLACEKGMVKAHQAILSACSPYFEQI 106


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 161 CDVELIGAGWSLAAHRAVLAARSHYFRDL 189
           CDV L      + AH+A+L+A S YF  +
Sbjct: 30  CDVTLACEKGMVKAHQAILSACSPYFEQI 58


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 161 CDVELIGAGWSLAAHRAVLAARSHYFRDL 189
           CDV L      + AH+A+L+A S YF  +
Sbjct: 78  CDVTLACEKGMVKAHQAILSACSPYFEQI 106


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 386 HDPD-SDCCRSG-RLSAAVPDVAMAPNANTHLLTN 418
           HD D S  C SG  LS A   V MAP    H+L N
Sbjct: 240 HDIDMSGLCISGLTLSEAAKRVEMAPFIADHVLVN 274


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.134    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,882
Number of Sequences: 2123
Number of extensions: 17688
Number of successful extensions: 48
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 44
Number of HSP's gapped (non-prelim): 5
length of query: 517
length of database: 516,269
effective HSP length: 67
effective length of query: 450
effective length of database: 374,028
effective search space: 168312600
effective search space used: 168312600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 50 (24.2 bits)