Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001714-TA|BGIBMGA001714-PA|IPR000418|Ets
(314 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28841| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_4156| Best HMM Match : Ets (HMM E-Value=0) 68 9e-12
SB_40652| Best HMM Match : Ets (HMM E-Value=0) 62 6e-10
SB_34495| Best HMM Match : Ets (HMM E-Value=0) 61 1e-09
SB_7150| Best HMM Match : Ets (HMM E-Value=2e-38) 57 2e-08
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 56 5e-08
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 5e-08
SB_13976| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_46246| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 5e-05
SB_31522| Best HMM Match : Ets (HMM E-Value=3.3e-25) 46 5e-05
SB_19675| Best HMM Match : Ets (HMM E-Value=1.2e-25) 42 7e-04
SB_49937| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_54838| Best HMM Match : Vitellogenin_N (HMM E-Value=4.76441e-44) 29 3.7
SB_4542| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_55936| Best HMM Match : Paramecium_SA (HMM E-Value=0.56) 29 4.9
SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12) 28 8.6
>SB_28841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 100 bits (239), Expect = 2e-21
Identities = 53/74 (71%), Positives = 54/74 (72%), Gaps = 18/74 (24%)
Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGDHAPPFIIFALASSNQQCERYV 276
+VARRWG QKNRPAMNYDKLSRSLRYYYEKGIMQKVAG ERYV
Sbjct: 280 EVARRWGLQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG------------------ERYV 321
Query: 277 YKFVCDPEALFSMA 290
YKFVC PEALFSMA
Sbjct: 322 YKFVCSPEALFSMA 335
>SB_4156| Best HMM Match : Ets (HMM E-Value=0)
Length = 516
Score = 68.1 bits (159), Expect = 9e-12
Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGD-HAPPFIIFALASSNQ 270
+VARRWG +KN+P MNYDKLSR+LRYYY+K IM K+ G +A + LA NQ
Sbjct: 392 EVARRWGERKNKPNMNYDKLSRALRYYYDKNIMTKIHGKRYAYKYDFQGLAQLNQ 446
>SB_40652| Best HMM Match : Ets (HMM E-Value=0)
Length = 120
Score = 62.1 bits (144), Expect = 6e-10
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 18/76 (23%)
Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGDHAPPFIIFALASSNQQCERYV 276
QVA++WG +KN+PAMNY+KLSR+LRYYY+ ++ KV G +R+V
Sbjct: 41 QVAQQWGKRKNKPAMNYEKLSRALRYYYDGDMIHKVHG------------------KRFV 82
Query: 277 YKFVCDPEALFSMAGG 292
YKFVC+ + L G
Sbjct: 83 YKFVCNLKNLLGYTAG 98
>SB_34495| Best HMM Match : Ets (HMM E-Value=0)
Length = 476
Score = 60.9 bits (141), Expect = 1e-09
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 18/69 (26%)
Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGDHAPPFIIFALASSNQQCERYVY 277
+A WG +KN+P MNY+KLSR LRYYY+K I+ KV G +RYVY
Sbjct: 273 IATMWGKRKNKPNMNYEKLSRGLRYYYDKNIIDKVHG------------------KRYVY 314
Query: 278 KFVCDPEAL 286
+FVCD E +
Sbjct: 315 QFVCDIEKI 323
>SB_7150| Best HMM Match : Ets (HMM E-Value=2e-38)
Length = 188
Score = 56.8 bits (131), Expect = 2e-08
Identities = 21/36 (58%), Positives = 32/36 (88%)
Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKV 252
+VA+RWG K+R MNY+KLSR++RYYY++GI++K+
Sbjct: 65 EVAKRWGILKHRAGMNYEKLSRAIRYYYQQGIIKKI 100
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 55.6 bits (128), Expect = 5e-08
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG 254
VA+ WG +KNR MNY+K+SR+LRYYYE+ I+++V G
Sbjct: 573 VAKLWGQRKNRRNMNYEKMSRALRYYYERHILERVPG 609
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 55.6 bits (128), Expect = 5e-08
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG 254
VA+ WG +KNR MNY+K+SR+LRYYYE+ I+++V G
Sbjct: 919 VAKLWGQRKNRRNMNYEKMSRALRYYYERHILERVPG 955
>SB_13976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 763
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGDHAPPFIIFALASSNQQCER 274
VAR WG +KNR M Y+K+SR++RYYYE+ I++ + +A ++F N C R
Sbjct: 570 VARLWGQRKNRHDMTYEKMSRAIRYYYERKIIKHILVRNADTEVVF----ENDDCRR 622
>SB_46246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/25 (76%), Positives = 22/25 (88%)
Query: 217 QVARRWGAQKNRPAMNYDKLSRSLR 241
+VARRWG K+RP MNYDKLSR+LR
Sbjct: 49 EVARRWGHLKHRPGMNYDKLSRALR 73
>SB_31522| Best HMM Match : Ets (HMM E-Value=3.3e-25)
Length = 79
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQK 251
+VAR WG ++N+P M Y+ +RSLR Y KGI+ K
Sbjct: 33 KVAREWGERRNKPFMKYENFARSLRTYIAKGILTK 67
>SB_19675| Best HMM Match : Ets (HMM E-Value=1.2e-25)
Length = 139
Score = 41.9 bits (94), Expect = 7e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKV 252
VAR+WG Q + M Y +SR+LR+ Y KGI+ KV
Sbjct: 74 VARKWGDQTGKQKMTYKIMSRALRHSYAKGIISKV 108
>SB_49937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 850
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 27 RESFYEHAHTHAPPHLYRTHTHAPPDGQTQPHACGIPFSKCNEDEEAREEPVSSSE 82
R+ YE H P + H H PPD Q + G+ S + D+E E SS +
Sbjct: 93 RQKHYEAKHPPHPVDIDSKHGH-PPDHQHELDLTGLVESIVDSDDEEEAESHSSGD 147
>SB_54838| Best HMM Match : Vitellogenin_N (HMM E-Value=4.76441e-44)
Length = 2581
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 235 KLSRSLRYYYEKGIMQKVAG 254
K S ++++YEKGI QK+AG
Sbjct: 2167 KRSMDVKFFYEKGIEQKIAG 2186
>SB_4542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 27 RESFYEHAHTHAPPHLYRTH--THAPPDGQTQPHAC 60
R + H H P H TH TH P ++ PH C
Sbjct: 415 RRYLFTHFRAHVPGHYPLTHFRTHGPGVTRSLPHTC 450
>SB_55936| Best HMM Match : Paramecium_SA (HMM E-Value=0.56)
Length = 581
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 119 SLARSRPSHDAAVSFEVIVSIILYTIEPDYTAHCTG 154
S+ S PS + ++ VS+++++I PD AH G
Sbjct: 347 SVNPSAPSSTGSSKSQIDVSVVMFSISPDAPAHSKG 382
>SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12)
Length = 1338
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 232 NYDKLSRSLRYYYEKGIMQKVAGDHAPPFIIFALASSNQQCE 273
NY +L R ++ +KG ++A D AP F+ QQ E
Sbjct: 432 NYQRLKRGKKHPKQKGCYARLATDEAPLFVTLNNRLVQQQKE 473
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.135 0.430
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,481,984
Number of Sequences: 59808
Number of extensions: 417206
Number of successful extensions: 913
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 896
Number of HSP's gapped (non-prelim): 19
length of query: 314
length of database: 16,821,457
effective HSP length: 82
effective length of query: 232
effective length of database: 11,917,201
effective search space: 2764790632
effective search space used: 2764790632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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