BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001714-TA|BGIBMGA001714-PA|IPR000418|Ets
(314 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56966-1|AAA98717.1| 208|Caenorhabditis elegans Hypothetical pr... 64 9e-11
U39470-3|AAC71120.1| 377|Caenorhabditis elegans Hypothetical pr... 63 3e-10
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 62 4e-10
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 62 4e-10
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 62 4e-10
U41547-4|AAA83194.3| 376|Caenorhabditis elegans Hypothetical pr... 59 4e-09
AF024491-4|AAZ82855.1| 365|Caenorhabditis elegans Hypothetical ... 58 6e-09
AF024491-3|AAB70311.2| 420|Caenorhabditis elegans Hypothetical ... 58 6e-09
U97005-6|AAB52279.1| 242|Caenorhabditis elegans Hypothetical pr... 51 9e-07
AF036689-2|AAB88319.1| 180|Caenorhabditis elegans Hypothetical ... 51 9e-07
U97005-4|AAB52283.1| 314|Caenorhabditis elegans Hypothetical pr... 48 7e-06
Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U64598-8|AAQ82848.1| 396|Caenorhabditis elegans Hypothetical pr... 33 0.26
U23449-5|AAC24296.2| 365|Caenorhabditis elegans Hypothetical pr... 33 0.35
U64598-9|AAK39212.2| 174|Caenorhabditis elegans Hypothetical pr... 32 0.46
U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z66521-17|CAM33508.1| 254|Caenorhabditis elegans Hypothetical p... 29 5.7
U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 29 5.7
U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 29 5.7
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 7.5
U46673-7|AAC48154.1| 811|Caenorhabditis elegans Beta-catenin/ar... 28 9.9
U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily ass... 28 9.9
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 28 9.9
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 28 9.9
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 28 9.9
AF063646-1|AAC17424.1| 811|Caenorhabditis elegans beta-catenin/... 28 9.9
>U56966-1|AAA98717.1| 208|Caenorhabditis elegans Hypothetical
protein C42D8.4 protein.
Length = 208
Score = 64.5 bits (150), Expect = 9e-11
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGD-HAPPFIIFALASSNQ 270
+VAR+WG +K++P MNYDKLSR+LRYYY+K IM KV G +A F LA + Q
Sbjct: 70 EVARKWGERKSKPNMNYDKLSRALRYYYDKNIMTKVQGKRYAYKFDFQGLAQACQ 124
>U39470-3|AAC71120.1| 377|Caenorhabditis elegans Hypothetical
protein T08H4.3 protein.
Length = 377
Score = 62.9 bits (146), Expect = 3e-10
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG 254
+VAR+WG +K++P MNYDK+SR+LRYYY+K IM KV G
Sbjct: 249 EVARKWGERKSKPNMNYDKMSRALRYYYDKNIMAKVHG 286
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 62.5 bits (145), Expect = 4e-10
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG 254
VAR+WG +K +P MNYDKLSR+LRYYYEK I++KV G
Sbjct: 101 VARKWGQRKAKPHMNYDKLSRALRYYYEKNIIKKVIG 137
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 62.5 bits (145), Expect = 4e-10
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG 254
VAR+WG +K +P MNYDKLSR+LRYYYEK I++KV G
Sbjct: 101 VARKWGQRKAKPHMNYDKLSRALRYYYEKNIIKKVIG 137
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 62.5 bits (145), Expect = 4e-10
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG 254
VAR+WG +K +P MNYDKLSR+LRYYYEK I++KV G
Sbjct: 101 VARKWGQRKAKPHMNYDKLSRALRYYYEKNIIKKVIG 137
>U41547-4|AAA83194.3| 376|Caenorhabditis elegans Hypothetical
protein F22A3.1 protein.
Length = 376
Score = 59.3 bits (137), Expect = 4e-09
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 215 TLQVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQK 251
+L +AR WG +KNR MNYDKLSRSLR YY+KGI+QK
Sbjct: 323 SLLLARYWGQRKNRSQMNYDKLSRSLRQYYKKGIIQK 359
>AF024491-4|AAZ82855.1| 365|Caenorhabditis elegans Hypothetical
protein C24A1.2b protein.
Length = 365
Score = 58.4 bits (135), Expect = 6e-09
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG 254
V+R WG KN+P MNY+ + R+LRYYY++GI+QKV G
Sbjct: 277 VSRLWGMHKNKPGMNYETMGRALRYYYQRGILQKVDG 313
>AF024491-3|AAB70311.2| 420|Caenorhabditis elegans Hypothetical
protein C24A1.2a protein.
Length = 420
Score = 58.4 bits (135), Expect = 6e-09
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG 254
V+R WG KN+P MNY+ + R+LRYYY++GI+QKV G
Sbjct: 332 VSRLWGMHKNKPGMNYETMGRALRYYYQRGILQKVDG 368
>U97005-6|AAB52279.1| 242|Caenorhabditis elegans Hypothetical
protein F19F10.1 protein.
Length = 242
Score = 51.2 bits (117), Expect = 9e-07
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGDHA 257
+VA WGA P MNYDK+SR LRY+Y ++KV G A
Sbjct: 80 KVAELWGAATGNPGMNYDKMSRGLRYFYTNNTLEKVPGKDA 120
>AF036689-2|AAB88319.1| 180|Caenorhabditis elegans Hypothetical
protein C50A2.4 protein.
Length = 180
Score = 51.2 bits (117), Expect = 9e-07
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Query: 124 RPSHDAAVSFEVIVSIILYTIEPDYTAHCTGKQLAVCDAARRVEPDRPRQPAARHHYTFR 183
RP+ + F I ++ +T+ + + L + R P PR + + +
Sbjct: 13 RPAAPDTIKFNTISTLCNFTVSALFHNMVSSTHLEPGNQENR-NPKNPRSTSHKKLRNYL 71
Query: 184 YTHSVPARGVAVSRKAVDLGRQLILFTRGGVTLQVARRWGAQKNRPAMNYDKLSRSLRYY 243
+ + + K + ++ L + +VAR WGA+K M+Y+ LSRS+R Y
Sbjct: 72 FQMILKSENDKNVAKIIKWTKKSSLEFQMVDRQEVARLWGAEKGNLKMDYEFLSRSIRSY 131
Query: 244 YEKGIMQKVAG 254
Y+ GIM+K+ G
Sbjct: 132 YKSGIMRKIPG 142
>U97005-4|AAB52283.1| 314|Caenorhabditis elegans Hypothetical
protein F19F10.5 protein.
Length = 314
Score = 48.4 bits (110), Expect = 7e-06
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVA 253
+VA WGA P MNYDK+SR LRY+Y ++KV+
Sbjct: 105 KVAELWGAATGNPGMNYDKMSRGLRYFYTNNTLKKVS 141
>Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKV 252
++AR WGA+KN M Y+KLSR++R YYEK I+ V
Sbjct: 431 KLARLWGARKNNEKMTYEKLSRAMRTYYEKQILVPV 466
>Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKV 252
++AR WGA+KN M Y+KLSR++R YYEK I+ V
Sbjct: 431 KLARLWGARKNNEKMTYEKLSRAMRTYYEKQILVPV 466
>U64598-8|AAQ82848.1| 396|Caenorhabditis elegans Hypothetical
protein C52B9.2b protein.
Length = 396
Score = 33.1 bits (72), Expect = 0.26
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 215 TLQVARRWGAQK-NRPAMNYDKLSRSLRYYYEK----GIMQKVAGDHAPPFIIFA 264
T V++ WG +K N MNY KLSR++R Y+ G ++K G H F I A
Sbjct: 310 TKLVSKLWGNRKRNTKDMNYSKLSRAMRDKYKSATSGGQLEKRPGLHTYAFTIQA 364
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 218 VARRWGAQK-NRPAMNYDKLSRSLRYYYEK 246
VA+ WG +K N M+Y KLSR++R YEK
Sbjct: 121 VAKMWGNRKHNTKDMDYYKLSRAIREKYEK 150
>U23449-5|AAC24296.2| 365|Caenorhabditis elegans Hypothetical
protein K06A1.1 protein.
Length = 365
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 27 RESFYEHAHTHAPPHLY-RTHTHAP-PDGQTQPHACGIPFSKCNEDEEAREEPVSSSE 82
R FYE+ T AP H++ H P P QP CG+ + ARE PVS+S+
Sbjct: 35 RPPFYENMRTFAPSHMHISCHYDIPYPPHLIQPPVCGV-----STFTYAREFPVSNSQ 87
>U64598-9|AAK39212.2| 174|Caenorhabditis elegans Hypothetical
protein C52B9.2a protein.
Length = 174
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 218 VARRWGAQK-NRPAMNYDKLSRSLRYYYEK 246
VA+ WG +K N M+Y KLSR++R YEK
Sbjct: 54 VAKMWGNRKHNTKDMDYYKLSRAIREKYEK 83
>U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical
protein C52E12.4 protein.
Length = 1487
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 155 KQLAVCDAARRVEPDRPRQPAARHH 179
K LA+CDA +++ D R+ ARH+
Sbjct: 127 KDLAICDAMAQLQQDHVREITARHN 151
>Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical
protein F15C11.1 protein.
Length = 744
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 14 YQYRECGGSLAPCRESFYEHAHTHAPPHLYRTHTHAPP 51
+ +R SL P + ++H H APP R H H PP
Sbjct: 359 HSFRGLPISLPPQLAAMHQHQHQIAPPQ--RIHIHNPP 394
>Z66521-17|CAM33508.1| 254|Caenorhabditis elegans Hypothetical
protein W02B12.13 protein.
Length = 254
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 35 HTHAPPHLYRTHTHAPPDGQTQPHACGIPFSKCNEDEEAREEPVSSSE 82
H H+ +R H H P D + +A G F K E EE REEP +S+
Sbjct: 44 HEHSQKRSHR-HRHLPHD-YGEHNAWG--FEKQAEGEEKREEPKETSQ 87
>U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form
protein.
Length = 715
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 14 YQYRECGGSLAPCRESFYEHAHTHAPPHLYRTHTHAPP 51
+ +R SL P + ++H H APP R H H PP
Sbjct: 330 HSFRGLPISLPPQLAAMHQHQHQIAPPQ--RIHIHNPP 365
>U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form
protein.
Length = 744
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 14 YQYRECGGSLAPCRESFYEHAHTHAPPHLYRTHTHAPP 51
+ +R SL P + ++H H APP R H H PP
Sbjct: 359 HSFRGLPISLPPQLAAMHQHQHQIAPPQ--RIHIHNPP 394
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 31 YEHAHTHAPP--HLYRTHTHAPPDGQTQPHACGIP 63
YEH PP H ++ APP GQ P G+P
Sbjct: 57 YEHPAQQHPPQHHSVPPNSFAPPPGQHHPQHPGMP 91
>U46673-7|AAC48154.1| 811|Caenorhabditis elegans
Beta-catenin/armadillo relatedprotein 1 protein.
Length = 811
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 31 YEHAHTHAPPHLYRTHTHAPPDGQTQPHA 59
Y H+PP +Y ++ PP+ PHA
Sbjct: 736 YNSPMYHSPPAMYPEYSIGPPETYLDPHA 764
>U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform c protein.
Length = 484
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 22 SLAPCRESFYEHAHTHAPPHL------YRTHTHAPPDGQTQPHACGIPFSKCNEDEEARE 75
S+AP ES + H H PPHL Y H PP +P S + + E
Sbjct: 180 SIAP-EESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIVQPVPISP-TDQQLLHE 237
Query: 76 EPVSSSEPHHRWDE 89
+ + H R ++
Sbjct: 238 FDIYDAPAHQRMNQ 251
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 22 SLAPCRESFYEHAHTHAPPHL------YRTHTHAPPDGQTQPHACGIPFSKCNEDEEARE 75
S+AP ES + H H PPHL Y H PP +P S + + E
Sbjct: 180 SIAP-EESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIVQPVPISP-TDQQLLHE 237
Query: 76 EPVSSSEPHHRWDE 89
+ + H R ++
Sbjct: 238 FDIYDAPAHQRMNQ 251
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 22 SLAPCRESFYEHAHTHAPPHL------YRTHTHAPPDGQTQPHACGIPFSKCNEDEEARE 75
S+AP ES + H H PPHL Y H PP +P S + + E
Sbjct: 180 SIAP-EESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIVQPVPISP-TDQQLLHE 237
Query: 76 EPVSSSEPHHRWDE 89
+ + H R ++
Sbjct: 238 FDIYDAPAHQRMNQ 251
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 22 SLAPCRESFYEHAHTHAPPHL------YRTHTHAPPDGQTQPHACGIPFSKCNEDEEARE 75
S+AP ES + H H PPHL Y H PP +P S + + E
Sbjct: 180 SIAP-EESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIVQPVPISP-TDQQLLHE 237
Query: 76 EPVSSSEPHHRWDE 89
+ + H R ++
Sbjct: 238 FDIYDAPAHQRMNQ 251
>AF063646-1|AAC17424.1| 811|Caenorhabditis elegans
beta-catenin/armadillo homologBAR-1 protein.
Length = 811
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 31 YEHAHTHAPPHLYRTHTHAPPDGQTQPHA 59
Y H+PP +Y ++ PP+ PHA
Sbjct: 736 YNSPMYHSPPAMYPEYSIGPPETYLDPHA 764
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.135 0.430
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,521,946
Number of Sequences: 27539
Number of extensions: 292065
Number of successful extensions: 660
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 640
Number of HSP's gapped (non-prelim): 29
length of query: 314
length of database: 12,573,161
effective HSP length: 81
effective length of query: 233
effective length of database: 10,342,502
effective search space: 2409802966
effective search space used: 2409802966
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)
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