BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001714-TA|BGIBMGA001714-PA|IPR000418|Ets (314 letters) Database: celegans 27,539 sequences; 12,573,161 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U56966-1|AAA98717.1| 208|Caenorhabditis elegans Hypothetical pr... 64 9e-11 U39470-3|AAC71120.1| 377|Caenorhabditis elegans Hypothetical pr... 63 3e-10 U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 62 4e-10 U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 62 4e-10 AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 62 4e-10 U41547-4|AAA83194.3| 376|Caenorhabditis elegans Hypothetical pr... 59 4e-09 AF024491-4|AAZ82855.1| 365|Caenorhabditis elegans Hypothetical ... 58 6e-09 AF024491-3|AAB70311.2| 420|Caenorhabditis elegans Hypothetical ... 58 6e-09 U97005-6|AAB52279.1| 242|Caenorhabditis elegans Hypothetical pr... 51 9e-07 AF036689-2|AAB88319.1| 180|Caenorhabditis elegans Hypothetical ... 51 9e-07 U97005-4|AAB52283.1| 314|Caenorhabditis elegans Hypothetical pr... 48 7e-06 Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical pr... 47 2e-05 Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical pr... 47 2e-05 U64598-8|AAQ82848.1| 396|Caenorhabditis elegans Hypothetical pr... 33 0.26 U23449-5|AAC24296.2| 365|Caenorhabditis elegans Hypothetical pr... 33 0.35 U64598-9|AAK39212.2| 174|Caenorhabditis elegans Hypothetical pr... 32 0.46 U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr... 29 4.3 Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 29 5.7 Z66521-17|CAM33508.1| 254|Caenorhabditis elegans Hypothetical p... 29 5.7 U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 29 5.7 U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 29 5.7 U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 7.5 U46673-7|AAC48154.1| 811|Caenorhabditis elegans Beta-catenin/ar... 28 9.9 U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily ass... 28 9.9 U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 28 9.9 U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 28 9.9 U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 28 9.9 AF063646-1|AAC17424.1| 811|Caenorhabditis elegans beta-catenin/... 28 9.9 >U56966-1|AAA98717.1| 208|Caenorhabditis elegans Hypothetical protein C42D8.4 protein. Length = 208 Score = 64.5 bits (150), Expect = 9e-11 Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%) Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGD-HAPPFIIFALASSNQ 270 +VAR+WG +K++P MNYDKLSR+LRYYY+K IM KV G +A F LA + Q Sbjct: 70 EVARKWGERKSKPNMNYDKLSRALRYYYDKNIMTKVQGKRYAYKFDFQGLAQACQ 124 >U39470-3|AAC71120.1| 377|Caenorhabditis elegans Hypothetical protein T08H4.3 protein. Length = 377 Score = 62.9 bits (146), Expect = 3e-10 Identities = 25/38 (65%), Positives = 33/38 (86%) Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG 254 +VAR+WG +K++P MNYDK+SR+LRYYY+K IM KV G Sbjct: 249 EVARKWGERKSKPNMNYDKMSRALRYYYDKNIMAKVHG 286 >U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. Length = 441 Score = 62.5 bits (145), Expect = 4e-10 Identities = 26/37 (70%), Positives = 32/37 (86%) Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG 254 VAR+WG +K +P MNYDKLSR+LRYYYEK I++KV G Sbjct: 101 VARKWGQRKAKPHMNYDKLSRALRYYYEKNIIKKVIG 137 >U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. Length = 441 Score = 62.5 bits (145), Expect = 4e-10 Identities = 26/37 (70%), Positives = 32/37 (86%) Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG 254 VAR+WG +K +P MNYDKLSR+LRYYYEK I++KV G Sbjct: 101 VARKWGQRKAKPHMNYDKLSRALRYYYEKNIIKKVIG 137 >AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell lineage protein 1 protein. Length = 441 Score = 62.5 bits (145), Expect = 4e-10 Identities = 26/37 (70%), Positives = 32/37 (86%) Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG 254 VAR+WG +K +P MNYDKLSR+LRYYYEK I++KV G Sbjct: 101 VARKWGQRKAKPHMNYDKLSRALRYYYEKNIIKKVIG 137 >U41547-4|AAA83194.3| 376|Caenorhabditis elegans Hypothetical protein F22A3.1 protein. Length = 376 Score = 59.3 bits (137), Expect = 4e-09 Identities = 26/37 (70%), Positives = 31/37 (83%) Query: 215 TLQVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQK 251 +L +AR WG +KNR MNYDKLSRSLR YY+KGI+QK Sbjct: 323 SLLLARYWGQRKNRSQMNYDKLSRSLRQYYKKGIIQK 359 >AF024491-4|AAZ82855.1| 365|Caenorhabditis elegans Hypothetical protein C24A1.2b protein. Length = 365 Score = 58.4 bits (135), Expect = 6e-09 Identities = 22/37 (59%), Positives = 30/37 (81%) Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG 254 V+R WG KN+P MNY+ + R+LRYYY++GI+QKV G Sbjct: 277 VSRLWGMHKNKPGMNYETMGRALRYYYQRGILQKVDG 313 >AF024491-3|AAB70311.2| 420|Caenorhabditis elegans Hypothetical protein C24A1.2a protein. Length = 420 Score = 58.4 bits (135), Expect = 6e-09 Identities = 22/37 (59%), Positives = 30/37 (81%) Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG 254 V+R WG KN+P MNY+ + R+LRYYY++GI+QKV G Sbjct: 332 VSRLWGMHKNKPGMNYETMGRALRYYYQRGILQKVDG 368 >U97005-6|AAB52279.1| 242|Caenorhabditis elegans Hypothetical protein F19F10.1 protein. Length = 242 Score = 51.2 bits (117), Expect = 9e-07 Identities = 21/41 (51%), Positives = 26/41 (63%) Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGDHA 257 +VA WGA P MNYDK+SR LRY+Y ++KV G A Sbjct: 80 KVAELWGAATGNPGMNYDKMSRGLRYFYTNNTLEKVPGKDA 120 >AF036689-2|AAB88319.1| 180|Caenorhabditis elegans Hypothetical protein C50A2.4 protein. Length = 180 Score = 51.2 bits (117), Expect = 9e-07 Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 1/131 (0%) Query: 124 RPSHDAAVSFEVIVSIILYTIEPDYTAHCTGKQLAVCDAARRVEPDRPRQPAARHHYTFR 183 RP+ + F I ++ +T+ + + L + R P PR + + + Sbjct: 13 RPAAPDTIKFNTISTLCNFTVSALFHNMVSSTHLEPGNQENR-NPKNPRSTSHKKLRNYL 71 Query: 184 YTHSVPARGVAVSRKAVDLGRQLILFTRGGVTLQVARRWGAQKNRPAMNYDKLSRSLRYY 243 + + + K + ++ L + +VAR WGA+K M+Y+ LSRS+R Y Sbjct: 72 FQMILKSENDKNVAKIIKWTKKSSLEFQMVDRQEVARLWGAEKGNLKMDYEFLSRSIRSY 131 Query: 244 YEKGIMQKVAG 254 Y+ GIM+K+ G Sbjct: 132 YKSGIMRKIPG 142 >U97005-4|AAB52283.1| 314|Caenorhabditis elegans Hypothetical protein F19F10.5 protein. Length = 314 Score = 48.4 bits (110), Expect = 7e-06 Identities = 19/37 (51%), Positives = 25/37 (67%) Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVA 253 +VA WGA P MNYDK+SR LRY+Y ++KV+ Sbjct: 105 KVAELWGAATGNPGMNYDKMSRGLRYFYTNNTLKKVS 141 >Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical protein C33A11.4 protein. Length = 493 Score = 47.2 bits (107), Expect = 2e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKV 252 ++AR WGA+KN M Y+KLSR++R YYEK I+ V Sbjct: 431 KLARLWGARKNNEKMTYEKLSRAMRTYYEKQILVPV 466 >Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical protein C33A11.4 protein. Length = 493 Score = 47.2 bits (107), Expect = 2e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 217 QVARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKV 252 ++AR WGA+KN M Y+KLSR++R YYEK I+ V Sbjct: 431 KLARLWGARKNNEKMTYEKLSRAMRTYYEKQILVPV 466 >U64598-8|AAQ82848.1| 396|Caenorhabditis elegans Hypothetical protein C52B9.2b protein. Length = 396 Score = 33.1 bits (72), Expect = 0.26 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%) Query: 215 TLQVARRWGAQK-NRPAMNYDKLSRSLRYYYEK----GIMQKVAGDHAPPFIIFA 264 T V++ WG +K N MNY KLSR++R Y+ G ++K G H F I A Sbjct: 310 TKLVSKLWGNRKRNTKDMNYSKLSRAMRDKYKSATSGGQLEKRPGLHTYAFTIQA 364 Score = 32.3 bits (70), Expect = 0.46 Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Query: 218 VARRWGAQK-NRPAMNYDKLSRSLRYYYEK 246 VA+ WG +K N M+Y KLSR++R YEK Sbjct: 121 VAKMWGNRKHNTKDMDYYKLSRAIREKYEK 150 >U23449-5|AAC24296.2| 365|Caenorhabditis elegans Hypothetical protein K06A1.1 protein. Length = 365 Score = 32.7 bits (71), Expect = 0.35 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 7/58 (12%) Query: 27 RESFYEHAHTHAPPHLY-RTHTHAP-PDGQTQPHACGIPFSKCNEDEEAREEPVSSSE 82 R FYE+ T AP H++ H P P QP CG+ + ARE PVS+S+ Sbjct: 35 RPPFYENMRTFAPSHMHISCHYDIPYPPHLIQPPVCGV-----STFTYAREFPVSNSQ 87 >U64598-9|AAK39212.2| 174|Caenorhabditis elegans Hypothetical protein C52B9.2a protein. Length = 174 Score = 32.3 bits (70), Expect = 0.46 Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Query: 218 VARRWGAQK-NRPAMNYDKLSRSLRYYYEK 246 VA+ WG +K N M+Y KLSR++R YEK Sbjct: 54 VAKMWGNRKHNTKDMDYYKLSRAIREKYEK 83 >U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical protein C52E12.4 protein. Length = 1487 Score = 29.1 bits (62), Expect = 4.3 Identities = 11/25 (44%), Positives = 17/25 (68%) Query: 155 KQLAVCDAARRVEPDRPRQPAARHH 179 K LA+CDA +++ D R+ ARH+ Sbjct: 127 KDLAICDAMAQLQQDHVREITARHN 151 >Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical protein F15C11.1 protein. Length = 744 Score = 28.7 bits (61), Expect = 5.7 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Query: 14 YQYRECGGSLAPCRESFYEHAHTHAPPHLYRTHTHAPP 51 + +R SL P + ++H H APP R H H PP Sbjct: 359 HSFRGLPISLPPQLAAMHQHQHQIAPPQ--RIHIHNPP 394 >Z66521-17|CAM33508.1| 254|Caenorhabditis elegans Hypothetical protein W02B12.13 protein. Length = 254 Score = 28.7 bits (61), Expect = 5.7 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 35 HTHAPPHLYRTHTHAPPDGQTQPHACGIPFSKCNEDEEAREEPVSSSE 82 H H+ +R H H P D + +A G F K E EE REEP +S+ Sbjct: 44 HEHSQKRSHR-HRHLPHD-YGEHNAWG--FEKQAEGEEKREEPKETSQ 87 >U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form protein. Length = 715 Score = 28.7 bits (61), Expect = 5.7 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Query: 14 YQYRECGGSLAPCRESFYEHAHTHAPPHLYRTHTHAPP 51 + +R SL P + ++H H APP R H H PP Sbjct: 330 HSFRGLPISLPPQLAAMHQHQHQIAPPQ--RIHIHNPP 365 >U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form protein. Length = 744 Score = 28.7 bits (61), Expect = 5.7 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Query: 14 YQYRECGGSLAPCRESFYEHAHTHAPPHLYRTHTHAPP 51 + +R SL P + ++H H APP R H H PP Sbjct: 359 HSFRGLPISLPPQLAAMHQHQHQIAPPQ--RIHIHNPP 394 >U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein C01G8.9a protein. Length = 1724 Score = 28.3 bits (60), Expect = 7.5 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%) Query: 31 YEHAHTHAPP--HLYRTHTHAPPDGQTQPHACGIP 63 YEH PP H ++ APP GQ P G+P Sbjct: 57 YEHPAQQHPPQHHSVPPNSFAPPPGQHHPQHPGMP 91 >U46673-7|AAC48154.1| 811|Caenorhabditis elegans Beta-catenin/armadillo relatedprotein 1 protein. Length = 811 Score = 27.9 bits (59), Expect = 9.9 Identities = 10/29 (34%), Positives = 15/29 (51%) Query: 31 YEHAHTHAPPHLYRTHTHAPPDGQTQPHA 59 Y H+PP +Y ++ PP+ PHA Sbjct: 736 YNSPMYHSPPAMYPEYSIGPPETYLDPHA 764 >U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily assigned gene nameprotein 149, isoform c protein. Length = 484 Score = 27.9 bits (59), Expect = 9.9 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 8/74 (10%) Query: 22 SLAPCRESFYEHAHTHAPPHL------YRTHTHAPPDGQTQPHACGIPFSKCNEDEEARE 75 S+AP ES + H H PPHL Y H PP +P S + + E Sbjct: 180 SIAP-EESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIVQPVPISP-TDQQLLHE 237 Query: 76 EPVSSSEPHHRWDE 89 + + H R ++ Sbjct: 238 FDIYDAPAHQRMNQ 251 >U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily assigned gene nameprotein 149, isoform d protein. Length = 799 Score = 27.9 bits (59), Expect = 9.9 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 8/74 (10%) Query: 22 SLAPCRESFYEHAHTHAPPHL------YRTHTHAPPDGQTQPHACGIPFSKCNEDEEARE 75 S+AP ES + H H PPHL Y H PP +P S + + E Sbjct: 180 SIAP-EESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIVQPVPISP-TDQQLLHE 237 Query: 76 EPVSSSEPHHRWDE 89 + + H R ++ Sbjct: 238 FDIYDAPAHQRMNQ 251 >U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily assigned gene nameprotein 149, isoform a protein. Length = 1091 Score = 27.9 bits (59), Expect = 9.9 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 8/74 (10%) Query: 22 SLAPCRESFYEHAHTHAPPHL------YRTHTHAPPDGQTQPHACGIPFSKCNEDEEARE 75 S+AP ES + H H PPHL Y H PP +P S + + E Sbjct: 180 SIAP-EESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIVQPVPISP-TDQQLLHE 237 Query: 76 EPVSSSEPHHRWDE 89 + + H R ++ Sbjct: 238 FDIYDAPAHQRMNQ 251 >U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily assigned gene nameprotein 149, isoform b protein. Length = 1107 Score = 27.9 bits (59), Expect = 9.9 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 8/74 (10%) Query: 22 SLAPCRESFYEHAHTHAPPHL------YRTHTHAPPDGQTQPHACGIPFSKCNEDEEARE 75 S+AP ES + H H PPHL Y H PP +P S + + E Sbjct: 180 SIAP-EESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIVQPVPISP-TDQQLLHE 237 Query: 76 EPVSSSEPHHRWDE 89 + + H R ++ Sbjct: 238 FDIYDAPAHQRMNQ 251 >AF063646-1|AAC17424.1| 811|Caenorhabditis elegans beta-catenin/armadillo homologBAR-1 protein. Length = 811 Score = 27.9 bits (59), Expect = 9.9 Identities = 10/29 (34%), Positives = 15/29 (51%) Query: 31 YEHAHTHAPPHLYRTHTHAPPDGQTQPHA 59 Y H+PP +Y ++ PP+ PHA Sbjct: 736 YNSPMYHSPPAMYPEYSIGPPETYLDPHA 764 Database: celegans Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 12,573,161 Number of sequences in database: 27,539 Lambda K H 0.321 0.135 0.430 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,521,946 Number of Sequences: 27539 Number of extensions: 292065 Number of successful extensions: 660 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 640 Number of HSP's gapped (non-prelim): 29 length of query: 314 length of database: 12,573,161 effective HSP length: 81 effective length of query: 233 effective length of database: 10,342,502 effective search space: 2409802966 effective search space used: 2409802966 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 59 (27.9 bits)
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