GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001714-TA|BGIBMGA001714-PA|IPR000418|Ets
         (314 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                55   7e-10
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    27   0.16 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   2.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   2.0  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 55.2 bits (127), Expect = 7e-10
 Identities = 21/37 (56%), Positives = 29/37 (78%)

Query: 218 VARRWGAQKNRPAMNYDKLSRSLRYYYEKGIMQKVAG 254
           V+R WG  KN+P MNY+ + R+LRYYY++GI+ KV G
Sbjct: 496 VSRLWGLHKNKPDMNYETMGRALRYYYQRGILAKVDG 532


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 27.5 bits (58), Expect = 0.16
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 33  HAHTHAPPHLYRTHTHAPPDGQTQPHA 59
           H+H HA PH + +H   P    + P A
Sbjct: 423 HSHIHATPHHHHSHAATPHHQHSTPLA 449


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 161 DAARRVEPDRPRQPAARHHYTFRYTHSV 188
           + A R++    RQP   ++YT++  HS+
Sbjct: 422 EKAARMQAKVNRQPVWFYYYTYKGAHSI 449


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 161 DAARRVEPDRPRQPAARHHYTFRYTHSV 188
           + A R++    RQP   ++YT++  HS+
Sbjct: 422 EKAARMQAKVNRQPVWFYYYTYKGAHSI 449


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.135    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,753
Number of Sequences: 429
Number of extensions: 3061
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 4
length of query: 314
length of database: 140,377
effective HSP length: 58
effective length of query: 256
effective length of database: 115,495
effective search space: 29566720
effective search space used: 29566720
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)