Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001713-TA|BGIBMGA001713-PA|IPR001611|Leucine-rich
repeat, IPR003591|Leucine-rich repeat, typical subtype
(395 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 71 1e-14
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 26 0.41
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 25 0.71
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 2.2
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 2.2
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 2.2
AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2 prot... 24 2.2
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 22 6.6
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 70.9 bits (166), Expect = 1e-14
Identities = 69/248 (27%), Positives = 108/248 (43%), Gaps = 16/248 (6%)
Query: 137 DVLRSLPKLTHFRLNAGRNITLHANMFANTPPLKYLELSDAKITVLPDDAFLGLNVLEQL 196
D+ R L ++ +F N+ RN+ H FA+ L+ + L D +I L AF+ L L++L
Sbjct: 89 DIHRDLTEV-YFSFNSVRNVQQHT--FADLIQLEQIHLDDNRIESLERRAFMNLKSLKRL 145
Query: 197 NVWENEIANITAGAFRGLHNVTVLSLNKNRIQALPAGLFASTPRL--LNLTMMRNSFRYL 254
N+ N+IA I F+ L + L L N I +L +F L ++ M N L
Sbjct: 146 NLKGNKIATIAYETFQNLPELEDLDLAYNSISSLDFNIFDQVGSLGMFHVNMSHNKLINL 205
Query: 255 ------DSETFRGLDHIQEIKI----SNNVPLTLKEAVFSNLPALRTLQLDLSSIRELPE 304
E GL +Q IK+ NN+ K+ +L L L + + +
Sbjct: 206 VVAPSVPFEQDTGLGGLQNIKVLDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATK 265
Query: 305 EFISNSP-LRTLSLARNQLRVLPRSVLRGQTQLTSLTLSYNAVAELAPELFADLRALETF 363
+ N P L+ L L+ N L L R +L L S+N ++E+ +LF L L
Sbjct: 266 DLFGNMPHLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFLGNLRIV 325
Query: 364 VMDGNELQ 371
N L+
Sbjct: 326 DFSHNRLR 333
Score = 70.9 bits (166), Expect = 1e-14
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 23/276 (8%)
Query: 90 LQKVHAEDVKTVVFKNAINPLNADAFKGLGITALMMFNAGAQTTVPVDVLRSLPKLTHFR 149
L+++H +D N I L AF L + T+ + ++LP+L
Sbjct: 118 LEQIHLDD-------NRIESLERRAFMNLKSLKRLNLKGNKIATIAYETFQNLPELEDLD 170
Query: 150 LNAGRNITLHANMFANTPPLK--YLELSDAKI---TVLPDDAF---LGLNVLEQLNVWEN 201
L +L N+F L ++ +S K+ V P F GL L+ + V +
Sbjct: 171 LAYNSISSLDFNIFDQVGSLGMFHVNMSHNKLINLVVAPSVPFEQDTGLGGLQNIKVLDL 230
Query: 202 EIANITAGA---FRGLH-NVTVLSLNKNRIQALPAGLFASTPRLLNLTMMRNSFRYLDSE 257
NIT+ A FR + ++ L L N++ LF + P L L + NS LD +
Sbjct: 231 SFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYELDFD 290
Query: 258 TFRGLDHIQEIKISNNVPLTLKEAVFSNLPALRTLQLDLSSIRELPEEFISNSPLRTLSL 317
TFR +Q + S+N + +F L LR + + +R LP+ + L L +
Sbjct: 291 TFRNTKKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNRLRSLPDNLFRETGLERLDV 350
Query: 318 ARNQLRVLP---RSVLRGQTQLTSLTLSYNAVAELA 350
+ N L LP S+ QT L+ L LS+N+++ L+
Sbjct: 351 SHNLLGKLPLTSLSLASAQT-LSELDLSWNSISSLS 385
Score = 64.9 bits (151), Expect = 1e-12
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 169 LKYLELSDAKITVLPDDAFLGLNVLEQLNVWENEIANITAGAFRGLHNVTVLSLNKNRIQ 228
LK + + P DA LN LE+L++ N + N+ +F L ++ + L N I+
Sbjct: 20 LKLTHALSSSVQNFPSDAIKILNRLEELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTIE 79
Query: 229 ALPAGLFASTPR--LLNLTMMRNSFRYLDSETFRGLDHIQEIKISNNVPLTLKEAVFSNL 286
+ G F L + NS R + TF L +++I + +N +L+ F NL
Sbjct: 80 MIHRGTFQGDIHRDLTEVYFSFNSVRNVQQHTFADLIQLEQIHLDDNRIESLERRAFMNL 139
Query: 287 PALRTLQLDLSSIRELPEEFISNSP-LRTLSLARNQLRVLPRSVLR--GQTQLTSLTLSY 343
+L+ L L + I + E N P L L LA N + L ++ G + + +S+
Sbjct: 140 KSLKRLNLKGNKIATIAYETFQNLPELEDLDLAYNSISSLDFNIFDQVGSLGMFHVNMSH 199
Query: 344 NAVAEL 349
N + L
Sbjct: 200 NKLINL 205
Score = 62.1 bits (144), Expect = 7e-12
Identities = 65/253 (25%), Positives = 118/253 (46%), Gaps = 12/253 (4%)
Query: 105 NAINPLNADAFKGLGITALMMFNAGAQTTVPVDVLRSLPKLTHFRLNAGRNITLHANMFA 164
N++ L+ D F+ + + + +P D+ R L L + R +L N+F
Sbjct: 282 NSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNRLRSLPDNLFR 341
Query: 165 NTPPLKYLELSDAKITVLP--DDAFLGLNVLEQLNVWENEIANIT-AGAFRGLHNVTVLS 221
T L+ L++S + LP + L +L++ N I++++ G ++ L
Sbjct: 342 ETG-LERLDVSHNLLGKLPLTSLSLASAQTLSELDLSWNSISSLSHGGQLARFKCLSWLD 400
Query: 222 LNKNRIQALPAGLFASTPRLLNLTMMRNSFRYLDSE--TFRGLDH-IQEIKISNNVPLTL 278
L+ NR+ + AG F PRL +L + NS L+ +F+GL++ + + + N ++L
Sbjct: 401 LSYNRLGQIDAGTFKGIPRLASLNLGHNSQLTLEINGLSFQGLEYTLLHLNLDN---VSL 457
Query: 279 KEAVFSNLPALRTLQLDLSSIRELPEEFISN-SPLRTLSLARNQLRVLPRSVLRGQTQLT 337
+ + P L +L L +S+ + E N S LR L+L N L +P V T+L
Sbjct: 458 SQVPALSTPNLLSLSLAFNSLPTVALEVAGNISSLRYLNLDYNDLSAVP-IVTHSLTELR 516
Query: 338 SLTLSYNAVAELA 350
L+L N + L+
Sbjct: 517 HLSLEGNPITTLS 529
Score = 58.8 bits (136), Expect = 6e-11
Identities = 41/177 (23%), Positives = 83/177 (46%), Gaps = 3/177 (1%)
Query: 190 LNVLEQLNVWENEIANITAGAFRGLHNVTVLSLNKNRIQALPAGLFASTPRLLNLTMMRN 249
L L+ + + + N + A + L+ + L L+ NR++ +P F L + + N
Sbjct: 17 LLTLKLTHALSSSVQNFPSDAIKILNRLEELDLSNNRLRNVPDNSFHFLRSLKKVHLQDN 76
Query: 250 SFRYLDSETFRGLDH--IQEIKISNNVPLTLKEAVFSNLPALRTLQLDLSSIRELPEE-F 306
+ + TF+G H + E+ S N +++ F++L L + LD + I L F
Sbjct: 77 TIEMIHRGTFQGDIHRDLTEVYFSFNSVRNVQQHTFADLIQLEQIHLDDNRIESLERRAF 136
Query: 307 ISNSPLRTLSLARNQLRVLPRSVLRGQTQLTSLTLSYNAVAELAPELFADLRALETF 363
++ L+ L+L N++ + + +L L L+YN+++ L +F + +L F
Sbjct: 137 MNLKSLKRLNLKGNKIATIAYETFQNLPELEDLDLAYNSISSLDFNIFDQVGSLGMF 193
Score = 52.8 bits (121), Expect = 4e-09
Identities = 52/251 (20%), Positives = 103/251 (41%), Gaps = 15/251 (5%)
Query: 135 PVDVLRSLPKLTHFRLNAGRNITLHANMFANTPPLKYLELSDAKITVLPDDAFLG--LNV 192
P D ++ L +L L+ R + N F LK + L D I ++ F G
Sbjct: 34 PSDAIKILNRLEELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTIEMIHRGTFQGDIHRD 93
Query: 193 LEQLNVWENEIANITAGAFRGLHNVTVLSLNKNRIQALPAGLFASTPRLLNLTMMRNSFR 252
L ++ N + N+ F L + + L+ NRI++L F + L L + N
Sbjct: 94 LTEVYFSFNSVRNVQQHTFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIA 153
Query: 253 YLDSETFRGLDHIQEIKISNNVPLTLKEAVFSNLPALRTLQLDLSSIRELPEEFISNSP- 311
+ ETF+ L ++++ ++ N +L +F + +L +++S + + + P
Sbjct: 154 TIAYETFQNLPELEDLDLAYNSISSLDFNIFDQVGSLGMFHVNMSHNKLINLVVAPSVPF 213
Query: 312 -----------LRTLSLARNQLRVLPRSVLRG-QTQLTSLTLSYNAVAELAPELFADLRA 359
++ L L+ N + + + R + L L L +N + +LF ++
Sbjct: 214 EQDTGLGGLQNIKVLDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPH 273
Query: 360 LETFVMDGNEL 370
L+ + N L
Sbjct: 274 LQVLDLSHNSL 284
Score = 30.7 bits (66), Expect = 0.019
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 133 TVPVDVLRSLPKLTHFRLNAGRNITLHANMFANTPPLKYLELSDAKITVLPDDAFLGL-N 191
TV ++V ++ L + L+ +++ + + L++L L IT L + + LG N
Sbjct: 480 TVALEVAGNISSLRYLNLDYN-DLSAVPIVTHSLTELRHLSLEGNPITTLSNTSLLGAAN 538
Query: 192 VLEQLNVWENEIANITAGAFRGLHNVTVLSLNKNR 226
LE+LN+ ++ + +GAF + + L + R
Sbjct: 539 QLEELNLKNIDLTVLESGAFCKMQPLRTLKIGVYR 573
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 26.2 bits (55), Expect = 0.41
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 99 KTVVFKNAINPLNADAFKGLGITALMMFNAGAQTTVPVDVLRSLPKL 145
K VF + LN D +K LG++ F A+ TVPV + S+P L
Sbjct: 24 KKTVFDIPNDYLN-DKYKPLGVSLSNRFKQDAEETVPVKKI-SIPPL 68
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 25.4 bits (53), Expect = 0.71
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 249 NSFRYLDSETFRGLDHIQEIKISNNVPLTLKEAVFSNLPALRTLQLDLSSIRE 301
N FR + + D I + +++ L + AVF +RTL + LS I+E
Sbjct: 65 NQFRSYSNFSVFLFDIITIVTLTSTSILLIVNAVFVKEKRIRTLLIKLSEIKE 117
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.8 bits (49), Expect = 2.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 332 GQTQLTSLTLSYNAVAELAPELFADLRALETF 363
G T L SLT+ N VAE P++ + L T+
Sbjct: 246 GVTILLSLTVFLNLVAETLPQVSDAIPLLGTY 277
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.8 bits (49), Expect = 2.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 332 GQTQLTSLTLSYNAVAELAPELFADLRALETF 363
G T L SLT+ N VAE P++ + L T+
Sbjct: 246 GVTILLSLTVFLNLVAETLPQVSDAIPLLGTY 277
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.8 bits (49), Expect = 2.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 332 GQTQLTSLTLSYNAVAELAPELFADLRALETF 363
G T L SLT+ N VAE P++ + L T+
Sbjct: 246 GVTILLSLTVFLNLVAETLPQVSDAIPLLGTY 277
>AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2
protein.
Length = 377
Score = 23.8 bits (49), Expect = 2.2
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 236 ASTPRLLNLTMMRNSFRYLDSETFRGLD---HIQEIKISNNVPLTLKEAVFSNLPALRTL 292
A++P L ++ +SF Y + F GLD E K N L+E + P L
Sbjct: 116 AASPEL-RANLIASSFEYFEKYGFNGLDIDWEYPEAKDKENFITLLREIKEAFQPKGHLL 174
Query: 293 QLDLSSI 299
+ +S+I
Sbjct: 175 TIAVSAI 181
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 22.2 bits (45), Expect = 6.6
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 137 DVLRSLPKLTHFRLNAGRNITLHANMFANTPPLKYLELSD--------AKITVLPDDAFL 188
D +L K++ F+L+A L A + T K S+ AKI+V+ DDA +
Sbjct: 279 DFQETLKKISQFQLDAHEFACLRAIVLFKTSFEKPSSSSNQEKTTTESAKISVIQDDAQM 338
Query: 189 GLN 191
LN
Sbjct: 339 RLN 341
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.320 0.135 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,417
Number of Sequences: 317
Number of extensions: 3410
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 14
length of query: 395
length of database: 114,650
effective HSP length: 58
effective length of query: 337
effective length of database: 96,264
effective search space: 32440968
effective search space used: 32440968
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)
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