Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001713-TA|BGIBMGA001713-PA|IPR001611|Leucine-rich
repeat, IPR003591|Leucine-rich repeat, typical subtype
(395 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 85 1e-18
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.37
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 23 4.5
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 6.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 6.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 6.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 6.0
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 85.0 bits (201), Expect = 1e-18
Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 6/272 (2%)
Query: 104 KNAINPLNADAFKGLGITALMMFNAGAQT--TVPVDVLRSLPKLTHFRLNAGRNITLHAN 161
+NAI + DA GL T L FNA + ++P + S L L L
Sbjct: 246 RNAIVEIAGDALTGL--TVLRTFNASYNSLDSLPEGLFASTRDLREIHLAYNGLRDLPKG 303
Query: 162 MFANTPPLKYLELSDAKITV--LPDDAFLGLNVLEQLNVWENEIANITAGAFRGLHNVTV 219
+F L L L+ ++ + + FLGL L LN+ N + +I A F+ L + +
Sbjct: 304 IFTRLEQLLVLNLAGNRLGSDRVDETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQI 363
Query: 220 LSLNKNRIQALPAGLFASTPRLLNLTMMRNSFRYLDSETFRGLDHIQEIKISNNVPLTLK 279
L L N I + + F L L + N R + ++ F GL + + +S N ++
Sbjct: 364 LDLRNNSIDRIESNAFLPLYNLHTLELSDNKLRTVGAQLFNGLFVLNRLTLSGNAIASID 423
Query: 280 EAVFSNLPALRTLQLDLSSIRELPEEFISNSPLRTLSLARNQLRVLPRSVLRGQTQLTSL 339
F N L+ L L + + +P+ + L+TL L N++ R QLT L
Sbjct: 424 PLAFRNCSDLKELDLSGNELTSVPDALRDLALLKTLDLGENRISNFYNGSFRNLDQLTGL 483
Query: 340 TLSYNAVAELAPELFADLRALETFVMDGNELQ 371
L N + L+ + DL L+ + N++Q
Sbjct: 484 RLIGNDIGNLSRGMLWDLPNLQILNLARNKVQ 515
Score = 82.2 bits (194), Expect = 7e-18
Identities = 66/247 (26%), Positives = 115/247 (46%), Gaps = 3/247 (1%)
Query: 105 NAINPLNADAFKGLGITALMMFNAGAQTTVPVDVLRSLPKLTHFRLNAGRNITLHANMFA 164
N+I+ + ++AF L + + TV + L L L+ ++ F
Sbjct: 369 NSIDRIESNAFLPLYNLHTLELSDNKLRTVGAQLFNGLFVLNRLTLSGNAIASIDPLAFR 428
Query: 165 NTPPLKYLELSDAKITVLPDDAFLGLNVLEQLNVWENEIANITAGAFRGLHNVTVLSLNK 224
N LK L+LS ++T +PD A L +L+ L++ EN I+N G+FR L +T L L
Sbjct: 429 NCSDLKELDLSGNELTSVPD-ALRDLALLKTLDLGENRISNFYNGSFRNLDQLTGLRLIG 487
Query: 225 NRIQALPAGLFASTPRLLNLTMMRNSFRYLDSETFRGLDHIQEIKISNNVPLTLKEAVFS 284
N I L G+ P L L + RN ++++ F ++ I++ N L+ VF+
Sbjct: 488 NDIGNLSRGMLWDLPNLQILNLARNKVQHVERYAFERNMRLEAIRLDGNF-LSDINGVFT 546
Query: 285 NLPALRTLQLDLSSIRELPEEFISNSPLRTLSLARNQLRVLPRSVLRGQTQLTSLTLSYN 344
++ +L L L + I FI + L+ L + N + L +++ +L S+N
Sbjct: 547 SIASLLLLNLSENHIEWFDYAFIPGN-LKWLDIHGNFIESLGNYYKIRDSKVKTLDASHN 605
Query: 345 AVAELAP 351
+ EL+P
Sbjct: 606 RITELSP 612
Score = 74.5 bits (175), Expect = 1e-15
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 28/230 (12%)
Query: 169 LKYLELSDAKITVLPDDA-FLGLNVLEQLNVWENEIANITAGAFRGLHNVTVLSLNKNRI 227
++ L+LS +IT L +++ L L L++L++ N I I A GL + + + N +
Sbjct: 214 IRILDLSRNEITRLQENSPLLDLRQLQELHLQRNAIVEIAGDALTGLTVLRTFNASYNSL 273
Query: 228 QALPAGLFASTPRLLNLTMMRNSFRYL--------------------------DSETFRG 261
+LP GLFAST L + + N R L D TF G
Sbjct: 274 DSLPEGLFASTRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAGNRLGSDRVDETTFLG 333
Query: 262 LDHIQEIKISNNVPLTLKEAVFSNLPALRTLQLDLSSIRELPEE-FISNSPLRTLSLARN 320
L + + +S N+ + +F +L L+ L L +SI + F+ L TL L+ N
Sbjct: 334 LIRLIVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSIDRIESNAFLPLYNLHTLELSDN 393
Query: 321 QLRVLPRSVLRGQTQLTSLTLSYNAVAELAPELFADLRALETFVMDGNEL 370
+LR + + G L LTLS NA+A + P F + L+ + GNEL
Sbjct: 394 KLRTVGAQLFNGLFVLNRLTLSGNAIASIDPLAFRNCSDLKELDLSGNEL 443
Score = 64.9 bits (151), Expect = 1e-12
Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 7/247 (2%)
Query: 131 QTTVPVDVLRSLPKLTHFRLNAGRNITLHANMFANTPPLKYLELSDAKITVLPDDAFLGL 190
Q P+ LR L +L H + NA + + + L+ S + LP+ F
Sbjct: 228 QENSPLLDLRQLQEL-HLQRNA--IVEIAGDALTGLTVLRTFNASYNSLDSLPEGLFAST 284
Query: 191 NVLEQLNVWENEIANITAGAFRGLHNVTVLSLNKNRI--QALPAGLFASTPRLLNLTMMR 248
L ++++ N + ++ G F L + VL+L NR+ + F RL+ L +
Sbjct: 285 RDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAGNRLGSDRVDETTFLGLIRLIVLNLSY 344
Query: 249 NSFRYLDSETFRGLDHIQEIKISNNVPLTLKEAVFSNLPALRTLQLDLSSIRELPEEFIS 308
N ++D+ F+ L +Q + + NN ++ F L L TL+L + +R + + +
Sbjct: 345 NMLTHIDARMFKDLFFLQILDLRNNSIDRIESNAFLPLYNLHTLELSDNKLRTVGAQLFN 404
Query: 309 N-SPLRTLSLARNQLRVLPRSVLRGQTQLTSLTLSYNAVAELAPELFADLRALETFVMDG 367
L L+L+ N + + R + L L LS N + + P+ DL L+T +
Sbjct: 405 GLFVLNRLTLSGNAIASIDPLAFRNCSDLKELDLSGNELTSV-PDALRDLALLKTLDLGE 463
Query: 368 NELQVGY 374
N + Y
Sbjct: 464 NRISNFY 470
Score = 58.8 bits (136), Expect = 7e-11
Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 25/257 (9%)
Query: 139 LRSLPKLTHFRLN----AGRNITLHANMFANTPPLKYLELSDAKITVLPDDAFLGLNVLE 194
L L KLT N A R + L + F L LE+ ++ + LP ++ L+ L+
Sbjct: 115 LLELKKLTVQTFNSVWGASRFLELAPDSFLGLRELHTLEIVESNVQALPVNSLCSLDNLQ 174
Query: 195 QLNVWENEIANIT-AGAFRG----------------LHNVTVLSLNKNRIQALPAGL-FA 236
LN+ EN + +I G R ++ +L L++N I L
Sbjct: 175 TLNLTENRLRDINDIGLNRRDSDDGSDGNDGDESSCRADIRILDLSRNEITRLQENSPLL 234
Query: 237 STPRLLNLTMMRNSFRYLDSETFRGLDHIQEIKISNNVPLTLKEAVFSNLPALRTLQLDL 296
+L L + RN+ + + GL ++ S N +L E +F++ LR + L
Sbjct: 235 DLRQLQELHLQRNAIVEIAGDALTGLTVLRTFNASYNSLDSLPEGLFASTRDLREIHLAY 294
Query: 297 SSIRELPEE-FISNSPLRTLSLARNQLRV--LPRSVLRGQTQLTSLTLSYNAVAELAPEL 353
+ +R+LP+ F L L+LA N+L + + G +L L LSYN + + +
Sbjct: 295 NGLRDLPKGIFTRLEQLLVLNLAGNRLGSDRVDETTFLGLIRLIVLNLSYNMLTHIDARM 354
Query: 354 FADLRALETFVMDGNEL 370
F DL L+ + N +
Sbjct: 355 FKDLFFLQILDLRNNSI 371
Score = 49.2 bits (112), Expect = 6e-08
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 18/225 (8%)
Query: 157 TLHANMFANTPPLKYLELSDAKITVLPDDAFLGLNVLEQL------NVW-ENEIANITAG 209
+ +A + L L + K+ +P+ AF L L++L +VW + +
Sbjct: 82 SFNAQSWQRLTSLHELHVHGCKVLRIPEGAFQPLLELKKLTVQTFNSVWGASRFLELAPD 141
Query: 210 AFRGLHNVTVLSLNKNRIQALPAGLFASTPRLLNLTMMRNSFRYLDSETFRGLDHIQEIK 269
+F GL + L + ++ +QALP S L L + N R ++ GL+
Sbjct: 142 SFLGLRELHTLEIVESNVQALPVNSLCSLDNLQTLNLTENRLRDINDI---GLNRRDSDD 198
Query: 270 ISNNVPLTLKEAVFSNLPA-LRTLQLDLSSIRELPEE--FISNSPLRTLSLARNQLRVLP 326
S+ + S+ A +R L L + I L E + L+ L L RN + +
Sbjct: 199 GSDG-----NDGDESSCRADIRILDLSRNEITRLQENSPLLDLRQLQELHLQRNAIVEIA 253
Query: 327 RSVLRGQTQLTSLTLSYNAVAELAPELFADLRALETFVMDGNELQ 371
L G T L + SYN++ L LFA R L + N L+
Sbjct: 254 GDALTGLTVLRTFNASYNSLDSLPEGLFASTRDLREIHLAYNGLR 298
Score = 42.3 bits (95), Expect = 7e-06
Identities = 26/92 (28%), Positives = 44/92 (47%)
Query: 182 LPDDAFLGLNVLEQLNVWENEIANITAGAFRGLHNVTVLSLNKNRIQALPAGLFASTPRL 241
L + F+G + L V + I +I F GL+N+ +L L NRI+ L F L
Sbjct: 809 LQNHVFIGRKNMRVLYVNGSGIESIQNRTFNGLNNLQILHLEDNRIRELKGFEFERLSHL 868
Query: 242 LNLTMMRNSFRYLDSETFRGLDHIQEIKISNN 273
L + N ++ + TF L ++ +++S N
Sbjct: 869 RELYLQNNLIGFIGNLTFLPLRSLEILRLSGN 900
Score = 39.5 bits (88), Expect = 5e-05
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Query: 201 NEIANITAGAFRGLHNVTVLSLNKNRIQALPAGLFASTPRLLNLTMMRNSFRYLDSETFR 260
N + + F G N+ VL +N + I+++ F L L + N R L F
Sbjct: 804 NVLRELQNHVFIGRKNMRVLYVNGSGIESIQNRTFNGLNNLQILHLEDNRIRELKGFEFE 863
Query: 261 GLDHIQEIKISNNVPLTLKEAVFSNLPALRTLQLDLSSIRELPE-EFISNSPLRTLSLAR 319
L H++E+ + NN+ + F L +L L+L + + P + N+ L LSL
Sbjct: 864 RLSHLRELYLQNNLIGFIGNLTFLPLRSLEILRLSGNRLVTFPVWQVTLNARLVELSLGS 923
Query: 320 N 320
N
Sbjct: 924 N 924
Score = 36.3 bits (80), Expect = 5e-04
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Query: 216 NVTVLSLNKNRIQALPAGLFASTPRLLNLTMMRNSFRYLDSETFRGLDHIQEIKISNNVP 275
+ T + L+ N ++ L +F + L + + + + TF GL+++Q + + +N
Sbjct: 795 DATEVYLDGNVLRELQNHVFIGRKNMRVLYVNGSGIESIQNRTFNGLNNLQILHLEDNRI 854
Query: 276 LTLKEAVFSNLPALRTLQLDLSSIRELPE-EFISNSPLRTLSLARNQLRVLPRSVLRGQT 334
LK F L LR L L + I + F+ L L L+ N+L P +
Sbjct: 855 RELKGFEFERLSHLRELYLQNNLIGFIGNLTFLPLRSLEILRLSGNRLVTFPVWQVTLNA 914
Query: 335 QLTSLTLSYN 344
+L L+L N
Sbjct: 915 RLVELSLGSN 924
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 26.6 bits (56), Expect = 0.37
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 157 TLHANMFANTPPLKYLELSDAKITVLPDDAFLGL 190
T HA A+ PP+ YL+ DA ++V F+ L
Sbjct: 289 TQHAKSQASLPPVSYLKAVDAFMSVCTVFVFMAL 322
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 23.0 bits (47), Expect = 4.5
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 225 NRIQALPAGLFASTPRLLNLTMMRNSF 251
N Q L + FAS PR T+ SF
Sbjct: 219 NSFQRLTSSTFASDPRYTTFTINGESF 245
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 332 GQTQLTSLTLSYNAVAELAPEL 353
G T L SLT+ N VAE P++
Sbjct: 229 GVTILLSLTVFLNLVAETLPQV 250
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 332 GQTQLTSLTLSYNAVAELAPEL 353
G T L SLT+ N VAE P++
Sbjct: 229 GVTILLSLTVFLNLVAETLPQV 250
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 332 GQTQLTSLTLSYNAVAELAPEL 353
G T L SLT+ N VAE P++
Sbjct: 229 GVTILLSLTVFLNLVAETLPQV 250
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 6.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 332 GQTQLTSLTLSYNAVAELAPEL 353
G T L SLT+ N VAE P++
Sbjct: 297 GVTILLSLTVFLNLVAETLPQV 318
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.320 0.135 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,986
Number of Sequences: 429
Number of extensions: 4323
Number of successful extensions: 43
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 16
length of query: 395
length of database: 140,377
effective HSP length: 59
effective length of query: 336
effective length of database: 115,066
effective search space: 38662176
effective search space used: 38662176
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)
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