BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001712-TA|BGIBMGA001712-PA|IPR001993|Mitochondrial substrate carrier, IPR002067|Mitochondrial carrier protein (358 letters) Database: bee 429 sequences; 140,377 total letters Searching.....................................................done Score E Sequences producing significant alignments: (bits) Value AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 52 6e-09 AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 52 6e-09 AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 7.1 AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 7.1 >AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 52.4 bits (120), Expect = 6e-09 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 5/86 (5%) Query: 152 IKHLIAGSLAGVTSQSATYPLDLARARMAVT-----NATEYRTLRAVFVKVVREEGFRRL 206 + +L +G AG TS YPLD AR R+A E+ L K+ + +G L Sbjct: 116 VGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGL 175 Query: 207 YRGYPATVLGVIPYAGVSFFTYETLK 232 YRG+ +V G+I Y F Y+T + Sbjct: 176 YRGFGVSVQGIIIYRAAYFGFYDTAR 201 Score = 46.4 bits (105), Expect = 4e-07 Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 36/215 (16%) Query: 153 KHLIAGSLAGVTSQSATYPLDLARARMAVTNATE-------YRTLRAVFVKVVREEGFRR 205 K +AG +A S++ P++ + + V + ++ Y+ + FV++ +E+GF Sbjct: 12 KDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLS 71 Query: 206 LYRGYPATVLGVIPYAGVSFFTYETLKHKYTGEAAQLHRQRPAARDSNRVRVSAEHFGPP 265 +RG A V+ P ++F + K + G D N + +F Sbjct: 72 YWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGV-----------DKNTQFL--RYF--- 115 Query: 266 QSALSSVLCGGAAGALAQTASYPLDIVRRRMQT--------RSYPTMLATFRAVYTTEGW 317 + ++ GGAAGA + YPLD R R+ R + + ++ +G Sbjct: 116 ---VGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGI 172 Query: 318 RGFFKGLSMNWVKGPIAVGIS-FATYDSIKGTLRD 351 G ++G ++ V+G I + F YD+ +G L D Sbjct: 173 TGLYRGFGVS-VQGIIIYRAAYFGFYDTARGMLPD 206 Score = 43.6 bits (98), Expect = 3e-06 Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Query: 281 LAQTASYPLDIVRRRMQTRS--------YPTMLATFRAVYTTEGWRGFFKGLSMNWVKGP 332 +A SYP D VRRRM +S Y + L + +Y TEG FFKG N ++G Sbjct: 225 VAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILRG- 283 Query: 333 IAVGISFATYDSIKGTL 349 + YD IK L Sbjct: 284 TGGALVLVLYDEIKNLL 300 Score = 33.5 bits (73), Expect = 0.003 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 6/70 (8%) Query: 45 PLDRAKINFQTSQIPYS------WRAAVRFLVQSARSEGAAALWRGNSATMARIVPYAAI 98 P++R K+ Q I ++ + V+ + +G + WRGN A + R P A+ Sbjct: 30 PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQAL 89 Query: 99 QFTAHEQWKR 108 F +++K+ Sbjct: 90 NFAFKDKYKQ 99 Score = 26.2 bits (55), Expect = 0.44 Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 10/92 (10%) Query: 265 PQSALSSVLCGGAAGALAQTASYPLDIVRRRMQT----------RSYPTMLATFRAVYTT 314 P + L GG A A+++T P++ V+ +Q + Y M+ F + Sbjct: 7 PVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKE 66 Query: 315 EGWRGFFKGLSMNWVKGPIAVGISFATYDSIK 346 +G+ +++G N ++ ++FA D K Sbjct: 67 QGFLSYWRGNLANVIRYFPTQALNFAFKDKYK 98 >AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 52.4 bits (120), Expect = 6e-09 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 5/86 (5%) Query: 152 IKHLIAGSLAGVTSQSATYPLDLARARMAVT-----NATEYRTLRAVFVKVVREEGFRRL 206 + +L +G AG TS YPLD AR R+A E+ L K+ + +G L Sbjct: 116 VGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGL 175 Query: 207 YRGYPATVLGVIPYAGVSFFTYETLK 232 YRG+ +V G+I Y F Y+T + Sbjct: 176 YRGFGVSVQGIIIYRAAYFGFYDTAR 201 Score = 46.4 bits (105), Expect = 4e-07 Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 36/215 (16%) Query: 153 KHLIAGSLAGVTSQSATYPLDLARARMAVTNATE-------YRTLRAVFVKVVREEGFRR 205 K +AG +A S++ P++ + + V + ++ Y+ + FV++ +E+GF Sbjct: 12 KDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLS 71 Query: 206 LYRGYPATVLGVIPYAGVSFFTYETLKHKYTGEAAQLHRQRPAARDSNRVRVSAEHFGPP 265 +RG A V+ P ++F + K + G D N + +F Sbjct: 72 YWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGV-----------DKNTQFL--RYF--- 115 Query: 266 QSALSSVLCGGAAGALAQTASYPLDIVRRRMQT--------RSYPTMLATFRAVYTTEGW 317 + ++ GGAAGA + YPLD R R+ R + + ++ +G Sbjct: 116 ---VGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGI 172 Query: 318 RGFFKGLSMNWVKGPIAVGIS-FATYDSIKGTLRD 351 G ++G ++ V+G I + F YD+ +G L D Sbjct: 173 TGLYRGFGVS-VQGIIIYRAAYFGFYDTARGMLPD 206 Score = 43.6 bits (98), Expect = 3e-06 Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Query: 281 LAQTASYPLDIVRRRMQTRS--------YPTMLATFRAVYTTEGWRGFFKGLSMNWVKGP 332 +A SYP D VRRRM +S Y + L + +Y TEG FFKG N ++G Sbjct: 225 VAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILRG- 283 Query: 333 IAVGISFATYDSIKGTL 349 + YD IK L Sbjct: 284 TGGALVLVLYDEIKNLL 300 Score = 33.5 bits (73), Expect = 0.003 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 6/70 (8%) Query: 45 PLDRAKINFQTSQIPYS------WRAAVRFLVQSARSEGAAALWRGNSATMARIVPYAAI 98 P++R K+ Q I ++ + V+ + +G + WRGN A + R P A+ Sbjct: 30 PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQAL 89 Query: 99 QFTAHEQWKR 108 F +++K+ Sbjct: 90 NFAFKDKYKQ 99 Score = 26.2 bits (55), Expect = 0.44 Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 10/92 (10%) Query: 265 PQSALSSVLCGGAAGALAQTASYPLDIVRRRMQT----------RSYPTMLATFRAVYTT 314 P + L GG A A+++T P++ V+ +Q + Y M+ F + Sbjct: 7 PVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKE 66 Query: 315 EGWRGFFKGLSMNWVKGPIAVGISFATYDSIK 346 +G+ +++G N ++ ++FA D K Sbjct: 67 QGFLSYWRGNLANVIRYFPTQALNFAFKDKYK 98 >AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein protein. Length = 427 Score = 22.2 bits (45), Expect = 7.1 Identities = 8/12 (66%), Positives = 10/12 (83%) Query: 311 VYTTEGWRGFFK 322 VY+ EG +GFFK Sbjct: 124 VYSCEGCKGFFK 135 >AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein protein. Length = 427 Score = 22.2 bits (45), Expect = 7.1 Identities = 8/12 (66%), Positives = 10/12 (83%) Query: 311 VYTTEGWRGFFK 322 VY+ EG +GFFK Sbjct: 124 VYSCEGCKGFFK 135 Database: bee Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 140,377 Number of sequences in database: 429 Lambda K H 0.321 0.131 0.390 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 75,736 Number of Sequences: 429 Number of extensions: 2304 Number of successful extensions: 20 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 2 Number of HSP's gapped (non-prelim): 14 length of query: 358 length of database: 140,377 effective HSP length: 58 effective length of query: 300 effective length of database: 115,495 effective search space: 34648500 effective search space used: 34648500 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 44 (21.8 bits)
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