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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001712-TA|BGIBMGA001712-PA|IPR001993|Mitochondrial
substrate carrier, IPR002067|Mitochondrial carrier protein
         (358 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    52   6e-09
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    52   6e-09
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   7.1  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   7.1  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 52.4 bits (120), Expect = 6e-09
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 5/86 (5%)

Query: 152 IKHLIAGSLAGVTSQSATYPLDLARARMAVT-----NATEYRTLRAVFVKVVREEGFRRL 206
           + +L +G  AG TS    YPLD AR R+A          E+  L     K+ + +G   L
Sbjct: 116 VGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGL 175

Query: 207 YRGYPATVLGVIPYAGVSFFTYETLK 232
           YRG+  +V G+I Y    F  Y+T +
Sbjct: 176 YRGFGVSVQGIIIYRAAYFGFYDTAR 201



 Score = 46.4 bits (105), Expect = 4e-07
 Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 36/215 (16%)

Query: 153 KHLIAGSLAGVTSQSATYPLDLARARMAVTNATE-------YRTLRAVFVKVVREEGFRR 205
           K  +AG +A   S++   P++  +  + V + ++       Y+ +   FV++ +E+GF  
Sbjct: 12  KDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLS 71

Query: 206 LYRGYPATVLGVIPYAGVSFFTYETLKHKYTGEAAQLHRQRPAARDSNRVRVSAEHFGPP 265
            +RG  A V+   P   ++F   +  K  + G             D N   +   +F   
Sbjct: 72  YWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGV-----------DKNTQFL--RYF--- 115

Query: 266 QSALSSVLCGGAAGALAQTASYPLDIVRRRMQT--------RSYPTMLATFRAVYTTEGW 317
              + ++  GGAAGA +    YPLD  R R+          R +  +      ++  +G 
Sbjct: 116 ---VGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGI 172

Query: 318 RGFFKGLSMNWVKGPIAVGIS-FATYDSIKGTLRD 351
            G ++G  ++ V+G I    + F  YD+ +G L D
Sbjct: 173 TGLYRGFGVS-VQGIIIYRAAYFGFYDTARGMLPD 206



 Score = 43.6 bits (98), Expect = 3e-06
 Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 9/77 (11%)

Query: 281 LAQTASYPLDIVRRRMQTRS--------YPTMLATFRAVYTTEGWRGFFKGLSMNWVKGP 332
           +A   SYP D VRRRM  +S        Y + L  +  +Y TEG   FFKG   N ++G 
Sbjct: 225 VAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILRG- 283

Query: 333 IAVGISFATYDSIKGTL 349
               +    YD IK  L
Sbjct: 284 TGGALVLVLYDEIKNLL 300



 Score = 33.5 bits (73), Expect = 0.003
 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 45  PLDRAKINFQTSQIPYS------WRAAVRFLVQSARSEGAAALWRGNSATMARIVPYAAI 98
           P++R K+  Q   I         ++  +   V+  + +G  + WRGN A + R  P  A+
Sbjct: 30  PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQAL 89

Query: 99  QFTAHEQWKR 108
            F   +++K+
Sbjct: 90  NFAFKDKYKQ 99



 Score = 26.2 bits (55), Expect = 0.44
 Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 10/92 (10%)

Query: 265 PQSALSSVLCGGAAGALAQTASYPLDIVRRRMQT----------RSYPTMLATFRAVYTT 314
           P +     L GG A A+++T   P++ V+  +Q           + Y  M+  F  +   
Sbjct: 7   PVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKE 66

Query: 315 EGWRGFFKGLSMNWVKGPIAVGISFATYDSIK 346
           +G+  +++G   N ++      ++FA  D  K
Sbjct: 67  QGFLSYWRGNLANVIRYFPTQALNFAFKDKYK 98


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 52.4 bits (120), Expect = 6e-09
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 5/86 (5%)

Query: 152 IKHLIAGSLAGVTSQSATYPLDLARARMAVT-----NATEYRTLRAVFVKVVREEGFRRL 206
           + +L +G  AG TS    YPLD AR R+A          E+  L     K+ + +G   L
Sbjct: 116 VGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGL 175

Query: 207 YRGYPATVLGVIPYAGVSFFTYETLK 232
           YRG+  +V G+I Y    F  Y+T +
Sbjct: 176 YRGFGVSVQGIIIYRAAYFGFYDTAR 201



 Score = 46.4 bits (105), Expect = 4e-07
 Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 36/215 (16%)

Query: 153 KHLIAGSLAGVTSQSATYPLDLARARMAVTNATE-------YRTLRAVFVKVVREEGFRR 205
           K  +AG +A   S++   P++  +  + V + ++       Y+ +   FV++ +E+GF  
Sbjct: 12  KDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLS 71

Query: 206 LYRGYPATVLGVIPYAGVSFFTYETLKHKYTGEAAQLHRQRPAARDSNRVRVSAEHFGPP 265
            +RG  A V+   P   ++F   +  K  + G             D N   +   +F   
Sbjct: 72  YWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGV-----------DKNTQFL--RYF--- 115

Query: 266 QSALSSVLCGGAAGALAQTASYPLDIVRRRMQT--------RSYPTMLATFRAVYTTEGW 317
              + ++  GGAAGA +    YPLD  R R+          R +  +      ++  +G 
Sbjct: 116 ---VGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGI 172

Query: 318 RGFFKGLSMNWVKGPIAVGIS-FATYDSIKGTLRD 351
            G ++G  ++ V+G I    + F  YD+ +G L D
Sbjct: 173 TGLYRGFGVS-VQGIIIYRAAYFGFYDTARGMLPD 206



 Score = 43.6 bits (98), Expect = 3e-06
 Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 9/77 (11%)

Query: 281 LAQTASYPLDIVRRRMQTRS--------YPTMLATFRAVYTTEGWRGFFKGLSMNWVKGP 332
           +A   SYP D VRRRM  +S        Y + L  +  +Y TEG   FFKG   N ++G 
Sbjct: 225 VAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILRG- 283

Query: 333 IAVGISFATYDSIKGTL 349
               +    YD IK  L
Sbjct: 284 TGGALVLVLYDEIKNLL 300



 Score = 33.5 bits (73), Expect = 0.003
 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 45  PLDRAKINFQTSQIPYS------WRAAVRFLVQSARSEGAAALWRGNSATMARIVPYAAI 98
           P++R K+  Q   I         ++  +   V+  + +G  + WRGN A + R  P  A+
Sbjct: 30  PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQAL 89

Query: 99  QFTAHEQWKR 108
            F   +++K+
Sbjct: 90  NFAFKDKYKQ 99



 Score = 26.2 bits (55), Expect = 0.44
 Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 10/92 (10%)

Query: 265 PQSALSSVLCGGAAGALAQTASYPLDIVRRRMQT----------RSYPTMLATFRAVYTT 314
           P +     L GG A A+++T   P++ V+  +Q           + Y  M+  F  +   
Sbjct: 7   PVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKE 66

Query: 315 EGWRGFFKGLSMNWVKGPIAVGISFATYDSIK 346
           +G+  +++G   N ++      ++FA  D  K
Sbjct: 67  QGFLSYWRGNLANVIRYFPTQALNFAFKDKYK 98


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)

Query: 311 VYTTEGWRGFFK 322
           VY+ EG +GFFK
Sbjct: 124 VYSCEGCKGFFK 135


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)

Query: 311 VYTTEGWRGFFK 322
           VY+ EG +GFFK
Sbjct: 124 VYSCEGCKGFFK 135


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.131    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,736
Number of Sequences: 429
Number of extensions: 2304
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 14
length of query: 358
length of database: 140,377
effective HSP length: 58
effective length of query: 300
effective length of database: 115,495
effective search space: 34648500
effective search space used: 34648500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)

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