Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001711-TA|BGIBMGA001711-PA|IPR013766|Thioredoxin domain,
IPR012336|Thioredoxin-like fold
(215 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces ... 123 2e-29
SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces pombe... 37 0.003
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 35 0.008
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 32 0.056
SPBP8B7.05c |||carbonic anhydrase |Schizosaccharomyces pombe|chr... 30 0.23
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 30 0.30
SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 29 0.52
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 28 0.91
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 27 1.6
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 27 2.1
SPBC2F12.08c |ceg1|pce1|mRNA guanylyltransferase Ceg1|Schizosacc... 27 2.8
SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|ch... 26 3.7
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 26 3.7
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 26 3.7
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 26 3.7
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 4.8
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 26 4.8
>SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 279
Score = 123 bits (297), Expect = 2e-29
Identities = 63/175 (36%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
Query: 4 VDQLLQHVAQNVERQIDSEIER--LDALESGDLEAIRQQRIAEMKLRAKQKQEWLAIGHG 61
VD A + DSE+E L+ D A R+QR+ +K + + GH
Sbjct: 76 VDLYADTYATQAATESDSELEDALFSQLDEFDDTAYREQRLEMLKKEFARVEAAKEKGHM 135
Query: 62 EYTEIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERA 121
++ ++ E+E S+ VV HFY D RCKI+D HL+ +AK H ET+F++++ A
Sbjct: 136 QFLTVENEREVMDFTLSSKKVVIHFYHPDFIRCKIIDSHLEKIAKVHWETKFIRIEAANA 195
Query: 122 PFLTGRLKIRVIPTLGLVKDNKTKDFIVGFTDLGNRDDFSTDILEWRIARSEAIE 176
PFL +L ++V+P + +++ D I+GF DLGN+DDF T +LE+R+ +S AI+
Sbjct: 196 PFLVVKLGLKVLPAVLCYVNSQLVDKIIGFADLGNKDDFETSLLEFRLLKSSAID 250
>SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 233
Score = 36.7 bits (81), Expect = 0.003
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 16/175 (9%)
Query: 8 LQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQ--EWLAIGHGEYT- 64
L H + + +D E D + L+ R +R+ E K + + + I EYT
Sbjct: 40 LAHENRLENKDLDELAELEDEEDDEFLQMYRNKRMQEWKDQMSKAKFGSVYPISKPEYTA 99
Query: 65 EI-DGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPF 123
E+ D KE F VV H ++ P CK++ L+ LA + + +FVK+ ++A
Sbjct: 100 EVTDASKEVF--------VVVHMFQDSLPACKLLAAILERLAPMYPQIKFVKIPGKQA-- 149
Query: 124 LTGRLKIRVIPTLGLVKDNKTKDFIVGFTDLGNRDDFSTDILEWRIARSEAIEYS 178
++PTL + + I+ LG + D+ E + R+ A++ S
Sbjct: 150 -VENYPEAMMPTLLIYGHGDLQQQILTLATLGGMNTSVVDVAE-ALVRAGALKDS 202
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 35.1 bits (77), Expect = 0.008
Identities = 17/86 (19%), Positives = 41/86 (47%)
Query: 65 EIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFL 124
++ EF ++ + + VV F+ + CK + + + + + F+K+DV++ +
Sbjct: 4 QVSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFIKVDVDQLSEI 63
Query: 125 TGRLKIRVIPTLGLVKDNKTKDFIVG 150
+ +P+ L K+ + + IVG
Sbjct: 64 AAEAGVHAMPSFFLYKNGEKIEEIVG 89
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 32.3 bits (70), Expect = 0.056
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 7 LLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQEWLAIGHGEYTEI 66
+LQ+ NV Q+ + ++L L SG + M+L +E LA+ G+YT+
Sbjct: 249 VLQNTIVNVSGQLIAVNDQLQQLRSGKASTSPSTKDTNMRLVEGHNEETLALQRGKYTQE 308
Query: 67 DGEK 70
+ +K
Sbjct: 309 EVDK 312
>SPBP8B7.05c |||carbonic anhydrase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 30.3 bits (65), Expect = 0.23
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 3 NVDQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAK 50
N++ LL H +++ I+ E LDA+E L R+ ++AE+ RA+
Sbjct: 148 NLNNLLDHWLRHIRDVIEDNREELDAIEDPQL---RRLKLAELNTRAQ 192
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 29.9 bits (64), Expect = 0.30
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Query: 65 EIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFV--KLDVERAP 122
EI + + + KS + Y CK + LA K+ +FV K++V+
Sbjct: 5 EIRSYQHWISTIPKSGYLAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQR 64
Query: 123 FLTGRLKIRVIPTLGLVKDNKTKDFIVG 150
+ L ++ +PT ++ K D + G
Sbjct: 65 QIASGLGVKAMPTFVFFENGKQIDMLTG 92
>SPBC3B8.09 |||U3 snoRNP-associated protein Utp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 597
Score = 29.1 bits (62), Expect = 0.52
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 171 RSEAI-EYSGDLLVPPSEAKKQKSLHIQSKKTIRGRDESDSDDFSD 215
RS A+ E SGDL +P E + ++ + + RGR++ D D
Sbjct: 414 RSRAVLELSGDLDMPYKERRFERQQRLMREAAARGRNQDAGADLDD 459
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 28.3 bits (60), Expect = 0.91
Identities = 15/68 (22%), Positives = 34/68 (50%)
Query: 83 VCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDN 142
V FY CK + L+ L++++ + F+ ++ ++ + + + +PT+ L +
Sbjct: 39 VVDFYADWCGPCKYLKPFLEKLSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKG 98
Query: 143 KTKDFIVG 150
+ D IVG
Sbjct: 99 QELDRIVG 106
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 27.5 bits (58), Expect = 1.6
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 6 QLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQ 53
QL A +ERQ + + ALE+ + QQRIA+ +L +Q Q
Sbjct: 360 QLAAQQAAEMERQRMAAQQHQQALEAIQMAQAEQQRIAQEQLAQQQFQ 407
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 27.1 bits (57), Expect = 2.1
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 149 VGFTDLGNRDDFSTDILEWRIARSEAIEYSGDLLVPPSEAKKQ-KSLH-IQSKKTIRGRD 206
+G D+G R F ++ L+ ++ +G+L P + K + KS+H +R ++
Sbjct: 160 LGNEDVGERSGFPSEGLDNEPESQRDLDETGNLA--PEDLKDEVKSVHEFNEPNDLRQQE 217
Query: 207 ESDSDD 212
ES SDD
Sbjct: 218 ESYSDD 223
>SPBC2F12.08c |ceg1|pce1|mRNA guanylyltransferase
Ceg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 69 EKEFFAVCNKSQNVVCHFYKSDSPR 93
EK +F VC KS + C Y ++ PR
Sbjct: 59 EKNYF-VCEKSDGIRCLLYMTEHPR 82
>SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 333
Score = 26.2 bits (55), Expect = 3.7
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 121 APFLTGRLKIRVIPTLGLVKDNKTKDFIVGFTDLGNRDDFSTDILEWRIARSEAIE 176
APF G L RV L KDFI F L N D F+ + E I +A+E
Sbjct: 203 APFCHGLLTGRVKTAEDL------KDFIKAFPFLRNMDKFNPKVFEKNIPFLKAVE 252
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 26.2 bits (55), Expect = 3.7
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 5 DQLLQHVAQNVERQIDSEIERLDALESGDLEAI--RQQRIAEMKLRAKQKQEW 55
D ++ H R+ID + LDA+ EAI R +R E +L AK ++ W
Sbjct: 869 DPIVIHAYLKKRREIDEQSTALDAVVPTGDEAIDRRNRRRLEQEL-AKSQKNW 920
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 167 WRIARSEAIEYSGDLLVPPSEAKKQKSLHIQSKKTIRGRDESDSDDFSD 215
W A + + + + V KK++ + ++ + G D SD DD+ D
Sbjct: 458 WDTATNPGVRKAFESRVTEEVTKKERIVQLEDRGA--GEDSSDDDDYED 504
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/73 (21%), Positives = 30/73 (41%)
Query: 78 KSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLG 137
K Q ++ +FY + CK ++ AK F+K++ E+ + + +P
Sbjct: 19 KEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFLKIEAEKFSDIAESFDVNAVPLFV 78
Query: 138 LVKDNKTKDFIVG 150
L+ K I G
Sbjct: 79 LIHGAKVLARISG 91
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 157 RDDFSTDILEWRIARSEAIEYSGDLLVPPSEAKKQKSLHIQSKKTIRGRDESDSDD 212
R ++LEWR ++ +A E D+ + E K+ + +K + + + +S D
Sbjct: 907 RQKMQEEVLEWRKSQQKASE--DDMSLSDDEEKQSGKKKKKDRKKRKSKSKQESSD 960
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/66 (19%), Positives = 35/66 (53%)
Query: 5 DQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQEWLAIGHGEYT 64
+QLL + ++++I + +++LES +L + ++I ++ R + ++ L G+
Sbjct: 750 EQLLVEKIEGIKKRILLKRREVNSLESQELSVLDTEKIQTLERRISETEKELESYAGQLQ 809
Query: 65 EIDGEK 70
+ E+
Sbjct: 810 DAKNEE 815
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.135 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 974,808
Number of Sequences: 5004
Number of extensions: 40225
Number of successful extensions: 113
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 102
Number of HSP's gapped (non-prelim): 17
length of query: 215
length of database: 2,362,478
effective HSP length: 70
effective length of query: 145
effective length of database: 2,012,198
effective search space: 291768710
effective search space used: 291768710
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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