Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001711-TA|BGIBMGA001711-PA|IPR013766|Thioredoxin domain,
IPR012336|Thioredoxin-like fold
(215 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0933 + 9193382-9193384,9194159-9194317,9194398-9194574 114 6e-26
08_01_0932 + 9185388-9185411,9185512-9185784,9185919-9185987 89 2e-18
05_03_0182 + 9332280-9332363,9334212-9334286,9334390-9334437,933... 48 6e-06
11_06_0335 + 22441240-22441548,22441958-22442028,22442321-224423... 46 2e-05
04_04_1248 - 32051679-32052356,32053617-32053778,32054147-320542... 44 7e-05
05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751 42 5e-04
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 39 0.004
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 38 0.005
02_05_0085 - 25697860-25698142,25698631-25698946,25700481-257005... 37 0.014
01_01_0604 - 4493868-4494028,4494538-4494746,4495860-4496003,449... 36 0.019
01_05_0706 + 24457148-24458031,24458621-24458822,24458896-244590... 36 0.025
04_04_0598 - 26514226-26514545,26516080-26516302 35 0.058
01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774 35 0.058
09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,250... 33 0.13
03_06_0330 - 33178114-33178206,33178317-33178382,33179704-331798... 33 0.13
07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215 33 0.18
07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288 33 0.18
05_01_0489 - 4077365-4077502,4078105-4078227,4079019-4079135,407... 32 0.31
05_07_0294 - 29038259-29038420,29038526-29038632,29038889-290390... 31 0.71
11_06_0236 + 21597601-21598415,21599223-21601152,21601361-21601510 30 1.6
07_03_0823 + 21765960-21766064,21766166-21766327,21766616-217667... 29 2.2
07_01_1118 - 10316298-10316710,10316789-10317264,10317397-103177... 29 2.9
06_01_0418 - 2979418-2981404,2984505-2986469,2987164-2988053 29 2.9
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610... 29 3.8
08_02_0497 - 17811413-17811529,17811644-17811724,17812693-178128... 29 3.8
03_01_0480 - 3676529-3676687,3676767-3676931,3677044-3677220,367... 29 3.8
02_05_1334 - 35765973-35766068,35766272-35766353,35766448-357664... 29 3.8
01_05_0530 + 22984672-22984821,22985444-22985676,22986659-229867... 29 3.8
11_06_0228 + 21497248-21498143,21499831-21501700,21501934-215020... 28 6.6
12_02_0449 - 19167167-19167300,19167394-19167550,19168527-191685... 27 8.8
04_03_0975 - 21370715-21370877,21371227-21371319,21371383-213714... 27 8.8
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 27 8.8
>08_01_0933 + 9193382-9193384,9194159-9194317,9194398-9194574
Length = 112
Score = 114 bits (274), Expect = 6e-26
Identities = 56/117 (47%), Positives = 83/117 (70%), Gaps = 8/117 (6%)
Query: 96 IVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVGFTDLG 155
++D HL ILAK+H+ETRFVK+ E+APFLT +L+I V+PTL LVK+ K +D++VGF +LG
Sbjct: 2 VMDKHLSILAKQHVETRFVKVHAEKAPFLTEKLRIVVLPTLALVKNTKVEDYVVGFDELG 61
Query: 156 NRDDFSTDILEWRIARSEAIEYSGDLLVPPSEAKKQKSLHIQSKKTIRGRDESDSDD 212
+DDFST+ LE R+A+++ I G+ P+ A KQ +K+++R D +S D
Sbjct: 62 GKDDFSTEDLEERLAKAQVIFLDGE---GPAHASKQ-----ATKRSVRQSDTGNSSD 110
>08_01_0932 + 9185388-9185411,9185512-9185784,9185919-9185987
Length = 121
Score = 89.4 bits (212), Expect = 2e-18
Identities = 40/86 (46%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 11 VAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQEWLAIGHGEYTEIDGEK 70
VA+ VE ++D +I LD L+ D+EA+R++RI +M+ A+++ +W A+GHGEY E+ EK
Sbjct: 17 VAKAVEDKLDEQIAALDRLDPDDIEALRERRILQMRRAAERRAKWRALGHGEYGEVP-EK 75
Query: 71 EFFAVCNKSQNVVCHFYKSDSPRCKI 96
EFFA S +VCHFY+ + P CK+
Sbjct: 76 EFFAAAKASDRLVCHFYRDNWP-CKV 100
>05_03_0182 +
9332280-9332363,9334212-9334286,9334390-9334437,
9334513-9334596,9334905-9334966,9335109-9335206,
9335281-9335390
Length = 186
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 119 ERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVGFTDLGNRDDFSTDILE 166
E APF +L I+ +P + L K D ++GF DLG++DDFST LE
Sbjct: 97 ENAPFFVTKLGIKTLPCVILFKKGIAADRLIGFQDLGSKDDFSTRALE 144
Score = 34.3 bits (75), Expect = 0.076
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 22 EIERLDALESGDLEAIRQQRIAEMKLRAKQKQEWLAIGHGEYTEI 66
E++ + L+ +LE + +RIA +K ++++ GHGEY EI
Sbjct: 45 EVDLDELLDDPELEKLHAERIAALKKEVEKREVLKRQGHGEYREI 89
>11_06_0335 +
22441240-22441548,22441958-22442028,22442321-22442381,
22443252-22443326,22443431-22443478,22443565-22443666,
22443971-22444032,22444187-22444284,22444361-22444470
Length = 311
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 119 ERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVGFTDLGNRDDFSTDILE 166
+ APF +L I+ +P + L K D +VGF DLG++DDFST LE
Sbjct: 222 KNAPFFVTKLGIKTLPCVILFKKGIAVDRLVGFQDLGSKDDFSTRALE 269
Score = 34.3 bits (75), Expect = 0.076
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 22 EIERLDALESGDLEAIRQQRIAEMKLRAKQKQEWLAIGHGEYTEI 66
E++ + L+ +LE + +RIA +K ++++ GHGEY EI
Sbjct: 164 EVDLDELLDDPELEKLHAERIAALKKEVEKREVLKRQGHGEYREI 208
>04_04_1248 -
32051679-32052356,32053617-32053778,32054147-32054269,
32054686-32054793
Length = 356
Score = 44.4 bits (100), Expect = 7e-05
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 53 QEWLAIGHGEYTEIDGEKEFFAVCNKSQN----VVCHFYKSDSPRCKIVDMHLKILAKKH 108
Q+ +G+ + +++ E+ + N++ N VV HF S ++ + LA+ H
Sbjct: 4 QQQKGVGNSKVVKVEKEESWDLFVNQASNEGHPVVAHFGASWCVTSLSMNYKFEELAQTH 63
Query: 109 IETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVG 150
E F+ +DV+ ++ +L ++ +PT L+KD + + IVG
Sbjct: 64 PEILFLYVDVDDVQSVSSKLGVKAMPTFFLIKDKEVVNKIVG 105
>05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751
Length = 121
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 82 VVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKD 141
VV F S C+I+ LAKKH F+K+DV+ + + + +PT +K+
Sbjct: 37 VVIDFTASWCGPCRIIAPVFADLAKKHTNAVFLKVDVDELKPIAEQFSVEAMPTFLFMKE 96
Query: 142 NKTKDFIVG 150
KD +VG
Sbjct: 97 GDVKDRVVG 105
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 74 AVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVI 133
A + S+ VV +F + C+ + K LA+KH F+K+D++ + R + +
Sbjct: 654 AASSLSRLVVLYFTAAWCGPCRFIGPVCKSLAEKHRNVVFLKVDIDELNSVAYRWNVSSV 713
Query: 134 PTLGLVKDNKTKDFIVG 150
P+ V++ K D +VG
Sbjct: 714 PSFFFVRNGKEIDKVVG 730
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 32 GDLEAIRQQRIAEMKLRAKQKQEWLAIGHG-EYTEIDGEKEFFAVCNKSQNVVCHFYKSD 90
GD E A++ L++ + +E + G E I G ++F + V HF
Sbjct: 538 GDTEVAEAYFHAQVALKSSRGEEVSNMKFGGEVEAITGMEQFQMATSLPGVSVIHFMTPL 597
Query: 91 SPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKD-NKTKDFI 148
+ +C + + L ++ F+K+D+ +P + +R +PT + K+ + K+ I
Sbjct: 598 NQQCCKISPFVNTLCTRYPSISFLKVDISESPAVARAENVRTVPTFKIYKNGTRVKEMI 656
>02_05_0085 -
25697860-25698142,25698631-25698946,25700481-25700518,
25700955-25701036,25701815-25702016
Length = 306
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 82 VVCHFYKSDSPRCKIVDMHLKILAKKHI-ETRFVKLDVERAPFLTGRLKIRVIPTLGLVK 140
V+ F+ S CK++D + L+K++ + KL+ + P + + IR IPT+ + K
Sbjct: 127 VLVEFWASWCGPCKMIDPVIGKLSKEYEGKLNCYKLNTDENPDIATQFGIRSIPTMMIFK 186
Query: 141 DNKTKDFIVG 150
+ + KD ++G
Sbjct: 187 NGEKKDAVIG 196
>01_01_0604 -
4493868-4494028,4494538-4494746,4495860-4496003,
4496298-4496539
Length = 251
Score = 36.3 bits (80), Expect = 0.019
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 18/206 (8%)
Query: 16 ERQIDSEIERLDALESGD--LEAIRQQRIAEMKLRAKQKQEWLAIGHGEYTEIDGEKEFF 73
ER+ D E+E L+ D LE R+ R+AE++ AK A G I G
Sbjct: 58 EREPD-ELEDLEDDLDDDRFLEQYRRMRLAELREAAK------AAKFGSIVPITGSDFVR 110
Query: 74 AVCNKSQNV--VCHFYKSDSPRCKIVDMHLKILAKKHIETRFVK-LDVERAPFLTGRLKI 130
V +V V YK P C ++ L LA ++ T+FVK + + P
Sbjct: 111 EVSQAPSDVWVVVFLYKDGIPECGLLQTCLDELATRYPATKFVKIISTDCIP----NYPD 166
Query: 131 RVIPTLGLVKDNKTKDFIVGFTDLGNRDDFSTDILEWRIARSEAIEYSGDLLVPPSEAKK 190
R +PT+ + ++ K VG G + + + + + +SE + G S
Sbjct: 167 RNVPTILVYNNSAVKGTYVGLQKFGGK-RCTPESVALALCQSEPVLNDGQSGGDSSRDNV 225
Query: 191 QKSLHIQ-SKKTIRGRDESDSDDFSD 215
+ + + +K + +E + DD SD
Sbjct: 226 IEGVRRKFIEKVVAQHEEREEDDDSD 251
>01_05_0706 +
24457148-24458031,24458621-24458822,24458896-24459080,
24459170-24459503,24459614-24459818,24460022-24460128,
24460220-24460381
Length = 692
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 61 GEYTEIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVER 120
GE + ++ A V +F + +C ++ + L + F+K++VE
Sbjct: 585 GEVEMVTSVEQLRAAIGSPGVSVVYFMSIMNQQCTLITPSVNSLCSECPSLNFLKVNVED 644
Query: 121 APFLTGRLKIRVIPTLGLVKDN-KTKDFI 148
+P + +R++PT + KD K K+ I
Sbjct: 645 SPMVAKAENVRIVPTFKIYKDGVKVKEMI 673
>04_04_0598 - 26514226-26514545,26516080-26516302
Length = 180
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/58 (27%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 94 CKIVDMHLKILAKKHI-ETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVG 150
CK++D + L+K++ + + KL+ + P + + +R IPT+ + K+ + KD ++G
Sbjct: 106 CKMIDPVVGKLSKEYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIG 163
>01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774
Length = 187
Score = 34.7 bits (76), Expect = 0.058
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 61 GEYTEIDGEKEFFAVCNKS--QNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDV 118
G+ TE++ + F+ + + + VV Y CK++ + +++K + F+KLD
Sbjct: 80 GQVTEVNKDT-FWPIVKSAGPKVVVLDMYTQWCGPCKVMAPKFQEMSEKDQDVVFLKLDC 138
Query: 119 ERA-PFLTGRLKIRVIPTLGLVKDNKTKDFIVG 150
+ L L I+V+PT ++KD K + G
Sbjct: 139 NQDNKSLAKELGIKVVPTFKILKDGKVVKEVTG 171
>09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,
2509852-2511564,2512335-2512424,2512533-2512801,
2513118-2513687,2513703-2514065
Length = 1094
Score = 33.5 bits (73), Expect = 0.13
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Query: 1 MANVDQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQEWLAIG- 59
++ ++Q LQHV +N E + +R + E +Q ++ ++ K+K +I
Sbjct: 905 VSRLEQALQHVHRN-EIALKELNDRFRTVSDSQKEVEKQNKVLHAIIKEKEKGFSSSISK 963
Query: 60 HGEYTE-----IDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKK 107
E+TE ++ + F + Q ++ H + + R ++ KILAK+
Sbjct: 964 EKEFTECMRCVVESMRGFEKLVTDQQTIIAHKVQHNESRFSLLKEQCKILAKE 1016
>03_06_0330 -
33178114-33178206,33178317-33178382,33179704-33179826,
33179930-33180067
Length = 139
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/73 (23%), Positives = 35/73 (47%)
Query: 77 NKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTL 136
N ++ +V F + C+ ++ K +A + + F K+DV+ + + K+ +PT
Sbjct: 42 NPNKLIVIDFSATWCGPCRFIEPAFKDMAGRFADAVFFKIDVDELSEVARQWKVEAMPTF 101
Query: 137 GLVKDNKTKDFIV 149
L+K K +V
Sbjct: 102 VLIKGGKEYQALV 114
>07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215
Length = 138
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/74 (25%), Positives = 36/74 (48%)
Query: 77 NKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTL 136
N ++ VV F S CK+++ K +A + + F+K+DV+ + ++ +PT
Sbjct: 41 NTTKLVVIDFSASWCGPCKMMEPVFKEMAGRFTDVAFLKVDVDELAEVARTWRVEAMPTF 100
Query: 137 GLVKDNKTKDFIVG 150
L + + IVG
Sbjct: 101 VLARGGEEVGRIVG 114
>07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288
Length = 122
Score = 33.1 bits (72), Expect = 0.18
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 8/115 (6%)
Query: 56 LAIGHGEYTEIDGEKEFFAVCNKSQN----VVCHFYKSDSPRCKIVDMHLKILAKKHIET 111
+A G + EF A K++ V+ F S C+ + AKK
Sbjct: 1 MAAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGA 60
Query: 112 RFVKLDVERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVGFTDLGNRDDFSTDILE 166
F+K+DV+ + + + +PT +KD D +VG +DD I++
Sbjct: 61 VFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVG----ARKDDLQNTIVK 111
>05_01_0489 -
4077365-4077502,4078105-4078227,4079019-4079135,
4079243-4079263
Length = 132
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 82 VVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKD 141
VV +F S C+++ ++K + + F+ +DV+ + IR PT +K+
Sbjct: 47 VVANFSASWCGPCRVIAPIYAEMSKTYPQLMFLTIDVDDLMDFSSSWDIRATPTFFFIKN 106
Query: 142 NKTKDFIVG 150
K D +VG
Sbjct: 107 EKQVDKLVG 115
>05_07_0294 -
29038259-29038420,29038526-29038632,29038889-29039093,
29039173-29039536,29039588-29039772,29039879-29040080,
29040697-29041589
Length = 705
Score = 31.1 bits (67), Expect = 0.71
Identities = 14/67 (20%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 83 VCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDN 142
V +F + + +C+ + + L + F+K++V+ +P + +R++P+ + KD
Sbjct: 620 VVYFMATMNQQCQQITPSVDSLCSECPSVNFLKVNVDESPMVARAENVRIVPSFKIYKDG 679
Query: 143 -KTKDFI 148
+ K+ I
Sbjct: 680 ARMKEMI 686
>11_06_0236 + 21597601-21598415,21599223-21601152,21601361-21601510
Length = 964
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 68 GEKEFFAVCNKS--QNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKL 116
GE+ F + NKS Q + H Y C + DM L ++ IE FVK+
Sbjct: 462 GERYFTELINKSMIQPIEHHLYLGTVDGCHVHDMVLDLIRLLAIEENFVKV 512
>07_03_0823 +
21765960-21766064,21766166-21766327,21766616-21766741,
21766831-21766956,21767519-21767698,21768204-21768452
Length = 315
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 4 VDQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQEWLAIGHGEY 63
+D L H+ QN++ Q ++ + LDAL LE + + ++ K KQ+ L +GH ++
Sbjct: 154 IDLGLPHIVQNLKAQAWTDEDLLDAL--NQLEIGLKDNLKKLSSFEKYKQQVL-LGHLDW 210
Query: 64 TEIDGEKEFF 73
+ + + F+
Sbjct: 211 SPMHKDPSFW 220
>07_01_1118 -
10316298-10316710,10316789-10317264,10317397-10317735,
10317798-10317895,10319007-10319045
Length = 454
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 92 PRCKIVDMHLKILAKKHIETRFVKL 116
P+C++ DM L I K +E+ FV+L
Sbjct: 226 PKCRVHDMMLDITVSKALESNFVRL 250
>06_01_0418 - 2979418-2981404,2984505-2986469,2987164-2988053
Length = 1613
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 55 WLAIG-----HGEYTEIDGEKEFFAVCNKSQNVVCHFYKSDSPR-CKIVDMHLKILAKKH 108
W+A G HG E GE+ F ++S + S R CK+ D+ L+++ K
Sbjct: 1132 WIAEGFVTQRHGLSMEQVGERYFDEFVSRSMVHLVRIDWSGKVRSCKVHDIMLEVIVSKS 1191
Query: 109 IETRFVKLDVERAPFLTGRLKIR 131
+E F + L KIR
Sbjct: 1192 LEENFASFFCDNGTELVSHDKIR 1214
>10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,
6104006-6105036
Length = 1336
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 10/104 (9%)
Query: 102 KILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDNKTKDFIVGFTDLGNRDDFS 161
+++ K + +R K VE + F + +P +K DF+ +T N+ D
Sbjct: 1022 EVVRNKDVVSRIAKWVVELSQF-----DVHFVPRTA-IKSQVLADFVASWTMPDNKSDNQ 1075
Query: 162 TDILEWRIARSEAIEY----SGDLLVPPSEAKKQKSLHIQSKKT 201
D W +A A+ +G +L PS + + ++H+ + T
Sbjct: 1076 GDNETWTMAFDGALNSQGAGAGFILTSPSGDQFKHAIHLNFRAT 1119
>08_02_0497 -
17811413-17811529,17811644-17811724,17812693-17812815,
17812945-17813193
Length = 189
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 82 VVCHFYKSDSPRCKIVDMHLKILAKKHIETR-FVKLDVERAPFLTGRLKIRVIPTLGLVK 140
++ FY + C ++ +++LA ++ FVK+D + L +++R +PTL
Sbjct: 103 LIVDFYATWCGPCVLMAQDIEMLAVEYENNALFVKVDTDDEYELARDMQVRGLPTLYFFS 162
Query: 141 DNKTKD 146
+++KD
Sbjct: 163 PDQSKD 168
>03_01_0480 -
3676529-3676687,3676767-3676931,3677044-3677220,
3678170-3678273,3678700-3678843,3679831-3679898,
3680059-3680162,3680759-3680767,3681572-3681657,
3681918-3683373
Length = 823
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 67 DGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTG 126
D +K+ +K V HF+ CK + + LA H E +F+ ++ +
Sbjct: 685 DFDKQLLLASDKL--TVVHFFSPSCGACKALHPKVCQLAGMHPELQFLMVNSNEQKEMCR 742
Query: 127 RLKIRVIP 134
RL + V+P
Sbjct: 743 RLNVHVLP 750
>02_05_1334 -
35765973-35766068,35766272-35766353,35766448-35766485,
35766601-35766657,35766795-35766858,35766947-35767043,
35767604-35767656,35767837-35767921,35768649-35769675
Length = 532
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 4 VDQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQR 41
+D+L++ + ER + +E ERLD+L+ DLE +R
Sbjct: 412 IDRLMEFYTRYSER-VKAETERLDSLDLDDLEMDEDER 448
>01_05_0530 +
22984672-22984821,22985444-22985676,22986659-22986743,
22986953-22987036,22987114-22987455
Length = 297
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 10 HVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQEWLAIGHGEYTEIDGE 69
+V Q + Q+D+E++++ ++ + + + +AE + + +E E D
Sbjct: 217 NVRQLSKPQVDAELDKMKSMSKEEAASFAARAVAEAEAAIAEAEEAARAAEAAEAEADAA 276
Query: 70 KEFF-AVCNKSQN 81
K F AV QN
Sbjct: 277 KAFLDAVVTTMQN 289
>11_06_0228 +
21497248-21498143,21499831-21501700,21501934-21502038,
21502139-21502232,21502335-21502363
Length = 997
Score = 27.9 bits (59), Expect = 6.6
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Query: 68 GEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKL-DV--ERAPFL 124
GE+ F + NKS + + S C+I DM L ++ K E FVK+ D E
Sbjct: 493 GERYFIELINKSMIQPIEEFCNVSG-CRIHDMVLDLIRKIATEGNFVKVFDKLHEMHGLS 551
Query: 125 TGRLKIRVIPTLGLVKDNKTKDFIVGFTDL 154
+ R IR I K D VG T L
Sbjct: 552 SQRTTIRRIALHKSWNQGKNNDLAVGMTHL 581
>12_02_0449 -
19167167-19167300,19167394-19167550,19168527-19168539,
19170218-19170540
Length = 208
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 4 VDQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQ 53
VD +L Q++ER++D+ I + +A QR AE++ + K+
Sbjct: 110 VDLILDQRVQSLERELDAAISAAARARTEKRQAEAAQRAAELRAQEVTKE 159
>04_03_0975 -
21370715-21370877,21371227-21371319,21371383-21371466,
21371745-21371869,21372360-21372600,21373640-21373734
Length = 266
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 82 VVCHFYKSDSPRCKIVDMHLKILAKKHI-ETRFVKLDVERAPFLTGRLKIRVIPTLGLVK 140
V+ F+ S C++V + +A+++ + KLD + P + I IPT+ L K
Sbjct: 36 VLIEFWASWCGPCRMVHRIVDEIAQEYAGRIKCYKLDTDDYPQVATSYSIERIPTVLLFK 95
Query: 141 DNKTKDFIVG 150
D + I G
Sbjct: 96 DGEKTHSITG 105
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 152 TDLGNRDDFSTDILEWRIARSEAIEYSGDLLVPPSEAKKQKSLHIQSKKTIRGRDESDS- 210
T LGN + DIL + ++ G+ S K + KK I+GR DS
Sbjct: 3861 TALGNMEHMPKDILSQPLQLLSGVDILGNASSALSNMSKGIAALSMDKKFIQGRMRQDSK 3920
Query: 211 --DDFSD 215
+DF D
Sbjct: 3921 GVEDFGD 3927
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.135 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,103,148
Number of Sequences: 37544
Number of extensions: 247449
Number of successful extensions: 637
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 613
Number of HSP's gapped (non-prelim): 35
length of query: 215
length of database: 14,793,348
effective HSP length: 79
effective length of query: 136
effective length of database: 11,827,372
effective search space: 1608522592
effective search space used: 1608522592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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