Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001711-TA|BGIBMGA001711-PA|IPR013766|Thioredoxin domain,
IPR012336|Thioredoxin-like fold
(215 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00048-9|AAB53824.1| 208|Caenorhabditis elegans Hypothetical pr... 177 7e-45
AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 44 1e-04
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 33 0.16
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 33 0.16
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 33 0.16
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 33 0.16
AL132865-5|CAB60597.1| 258|Caenorhabditis elegans Hypothetical ... 32 0.36
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 32 0.36
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 30 1.1
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin pro... 29 3.4
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 28 5.9
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 28 5.9
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 28 5.9
AL032663-5|CAA21765.1| 896|Caenorhabditis elegans Hypothetical ... 28 5.9
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 27 7.8
>U00048-9|AAB53824.1| 208|Caenorhabditis elegans Hypothetical
protein C05D11.3 protein.
Length = 208
Score = 177 bits (430), Expect = 7e-45
Identities = 86/171 (50%), Positives = 119/171 (69%), Gaps = 1/171 (0%)
Query: 5 DQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQEWLAIGHGEYT 64
+QLL+ AQ VE QID E+ +L+ LE DLE IR+QR+ +MK K + E L+ GHG+Y
Sbjct: 11 EQLLR-AAQVVEEQIDQEMNKLENLEEDDLEVIRRQRMEQMKKAQKDRIEMLSHGHGKYE 69
Query: 65 EIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFL 124
E+ EKEFF KS VVC FY + RCKIVD H +ILA+KH+ TRF+ ++ E+ FL
Sbjct: 70 EVADEKEFFEATKKSDKVVCLFYLPGNFRCKIVDKHFEILARKHVGTRFIHVNAEKVHFL 129
Query: 125 TGRLKIRVIPTLGLVKDNKTKDFIVGFTDLGNRDDFSTDILEWRIARSEAI 175
T RL IRVIP++ +V +T D+I GF +LG +D+F+T+ +E R+ARSE +
Sbjct: 130 TTRLNIRVIPSIAIVVKQQTVDYIRGFDELGGKDEFTTETMENRLARSEVL 180
>AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical
protein D2063.3a protein.
Length = 345
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 65 EIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLK-ILAKKHIETRFVKLDVERAPF 123
EI +E A + V HFY S +P C+ V+ L +LA+ + R +D E P
Sbjct: 5 EIKSGEEVAAFIKEPSPAVLHFYASWAPSCEQVNQLLDDLLAEIALPLRAAFIDAEALPG 64
Query: 124 LTGRLKIRVIPTLGLVKDNKTKDFIVGF 151
++ KI PTL + K D I GF
Sbjct: 65 ISLNFKITAAPTLVFFSNGKEVDRIDGF 92
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 65 EIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLK-ILAKKHIETRFVKLDVERAPF 123
EI +E A + V HFY S +P C+ V+ L +LA+ + R +D E P
Sbjct: 5 EIKSGEEVAAFIKEPSPAVLHFYASWAPSCEQVNQLLDDLLAEIALPLRAAFIDAEALPG 64
Query: 124 LTGRLKIRVIPTLGLVKDNKTKDFIVGF 151
++ KI PTL + K D I GF
Sbjct: 65 ISLNFKITAAPTLVFFSNGKEVDRIDGF 92
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 82 VVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKD 141
++ FY + CK + K LA H F K+DV+ A L + ++++PT K+
Sbjct: 30 IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 89
Query: 142 NKTKDFIVG 150
+ + G
Sbjct: 90 GDAIEALEG 98
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 82 VVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKD 141
++ FY + CK + K LA H F K+DV+ A L + ++++PT K+
Sbjct: 29 IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 88
Query: 142 NKTKDFIVG 150
+ + G
Sbjct: 89 GDAIEALEG 97
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 82 VVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKD 141
++ FY + CK + K LA H F K+DV+ A L + ++++PT K+
Sbjct: 29 IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 88
Query: 142 NKTKDFIVG 150
+ + G
Sbjct: 89 GDAIEALEG 97
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 82 VVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKD 141
++ FY + CK + K LA H F K+DV+ A L + ++++PT K+
Sbjct: 30 IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 89
Query: 142 NKTKDFIVG 150
+ + G
Sbjct: 90 GDAIEALEG 98
>AL132865-5|CAB60597.1| 258|Caenorhabditis elegans Hypothetical
protein Y62E10A.8 protein.
Length = 258
Score = 31.9 bits (69), Expect = 0.36
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 47 LRAKQKQEWLAIGHGEYTEIDGEKEFF-AVCNKSQNVVCHF-YKSDSPRCKIVDMHLKIL 104
L+AK+ +E I E+ +K++ AV S ++C Y+ +S C+ + +KIL
Sbjct: 112 LKAKRLREMRKIAANRVIEMTDKKQYSDAVDGSSSYLLCVLIYEPESDECEYLTRIVKIL 171
Query: 105 AKKHIETRFVK 115
A +T+FV+
Sbjct: 172 AADCPKTKFVR 182
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 31.9 bits (69), Expect = 0.36
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 67 DGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIET-RFVKLDVERAPFLT 125
D K FA K+Q V+ F S C+++ ++ LA +H + +K+DV+ +
Sbjct: 9 DEFKTIFAE-KKTQPVILFFTASWCGPCQMIKPRVEELAAEHKDRLSILKIDVDECDGVG 67
Query: 126 GRLKIRVIPTLGLVKDNKTKDFIVG 150
+I +PT L+ D KD G
Sbjct: 68 EEYEINSMPTFLLIVDGIKKDQFSG 92
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Query: 2 ANVDQLLQHVAQNVERQIDSEIERLDALESGDLEA-IRQQRIAEMKLRAKQKQEWLAIGH 60
A V L Q + + ++ + EIE L+ +LE + R+ + KLR ++
Sbjct: 133 AEVKDLQQEIEEMQDQYREEEIEEFRELQR-ELELNAKNCRVLQFKLRKTERSR----DQ 187
Query: 61 GEYTEIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKI 103
E ++ EK+ N V KSDS + K ++ +++
Sbjct: 188 AEAEKMHSEKKLDEYMNSCPEAVAASIKSDSAKVKELEYEIRV 230
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Query: 2 ANVDQLLQHVAQNVERQIDSEIERLDALESGDLEA-IRQQRIAEMKLRAKQKQEWLAIGH 60
A V L Q + + ++ + EIE L+ +LE + R+ + KLR ++
Sbjct: 133 AEVKDLQQEIEEMQDQYREEEIEEFRELQR-ELELNAKNCRVLQFKLRKTERSR----DQ 187
Query: 61 GEYTEIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKI 103
E ++ EK+ N V KSDS + K ++ +++
Sbjct: 188 AEAEKMHSEKKLDEYMNSCPEAVAASIKSDSAKVKELEYEIRV 230
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Query: 2 ANVDQLLQHVAQNVERQIDSEIERLDALESGDLEA-IRQQRIAEMKLRAKQKQEWLAIGH 60
A V L Q + + ++ + EIE L+ +LE + R+ + KLR ++
Sbjct: 133 AEVKDLQQEIEEMQDQYREEEIEEFRELQR-ELELNAKNCRVLQFKLRKTERSR----DQ 187
Query: 61 GEYTEIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKI 103
E ++ EK+ N V KSDS + K ++ +++
Sbjct: 188 AEAEKMHSEKKLDEYMNSCPEAVAASIKSDSAKVKELEYEIRV 230
>AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin
protein 1 protein.
Length = 170
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 5 DQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQEW 55
D L+++A+ + Q D E R A E ++A+R R+A ++ +K EW
Sbjct: 41 DIALRNIAKFFKEQSDEE--RGHATELMRIQAVRGGRVAMQNIQKPEKDEW 89
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
protein C03D6.4 protein.
Length = 1390
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 9 QHVAQNVERQIDSEIERLDALESGD--LEAIRQQRIAEMKLRAKQKQEWLAIGHGEYTE 65
QH + ++ +ID ++E + +E G+ LE +R E +R + + + +G+Y E
Sbjct: 616 QHTVKEMDFEIDEKMELVAGVEDGNQVLEKLRNMSETEKLMRFNKLETAADLLNGKYEE 674
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/53 (28%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 2 ANVDQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQE 54
A V+++ + ++ R++D+E+ER +A+ SG E I++ + + + K+K+E
Sbjct: 827 ARVEEIPEKATKSF-RELDNELERCEAVHSG--EKIKKVKEPKPPKQPKEKKE 876
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/53 (28%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 2 ANVDQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQE 54
A V+++ + ++ R++D+E+ER +A+ SG E I++ + + + K+K+E
Sbjct: 840 ARVEEIPEKATKSF-RELDNELERCEAVHSG--EKIKKVKEPKPPKQPKEKKE 889
>AL032663-5|CAA21765.1| 896|Caenorhabditis elegans Hypothetical
protein Y75B12B.6 protein.
Length = 896
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 174 AIEYSGDLLVPPSEAKKQKSLHIQSKKTIRGRDESDSDDFS 214
A E +GD++ PP E K K L I++KK + ES S D S
Sbjct: 443 AKEGAGDVVYPPPELLKHKIL-IKAKKKRFEKQESRSRDSS 482
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Query: 143 KTKDFIVGFTDLGNRDDFSTDILEWRIARSEAIEYSGDLLVPPSEAKKQ 191
K KD+ F RDD + EW E L PP E KK+
Sbjct: 408 KVKDY--AFIHFNERDDCLKAMEEWNGKELEGTVVEASLAKPPQEKKKK 454
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.135 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,317,116
Number of Sequences: 27539
Number of extensions: 224276
Number of successful extensions: 727
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 716
Number of HSP's gapped (non-prelim): 26
length of query: 215
length of database: 12,573,161
effective HSP length: 78
effective length of query: 137
effective length of database: 10,425,119
effective search space: 1428241303
effective search space used: 1428241303
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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