Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001710-TA|BGIBMGA001710-PA|IPR001841|Zinc finger,
RING-type, IPR011046|WD40-like
(609 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 27 0.38
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 26 0.66
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 26 0.66
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 26 0.66
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 26 0.66
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 26 0.66
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 26 0.66
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 26 0.66
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 26 0.66
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 26 0.87
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 25 2.0
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 24 3.5
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 23 6.1
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 6.1
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.1 bits (57), Expect = 0.38
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 83 LNIIINGPGHLPAQSEDSNLTSPLTSFSD-ESTRQSINEDSNSCASIRLNP 132
L++ + PG + NL+SP +S S ST ++ ++NS +S NP
Sbjct: 147 LSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQSSNP 197
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 26.2 bits (55), Expect = 0.66
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 74 DNDDSNDTVLN-IIINGPGHLPAQSEDSNLTSPLT 107
+ND D+V + +I+N P H P + S T+ LT
Sbjct: 1379 ENDYGQDSVTHQLIVNAPPHAPQIALTSTTTNSLT 1413
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.66
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 83 LNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNSCASIRLNPRPPDDIEPPA 142
L++ + PG + NL+SP +S S S+ + ++N+ S + + PP
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQ-SSNPPQIYPWMK 205
Query: 143 KLRKMNEVEEVDGET 157
++ +GET
Sbjct: 206 RVHLGQSTVNANGET 220
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 26.2 bits (55), Expect = 0.66
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 83 LNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNSCASIRLNPRPPDDIEPPA 142
L++ + PG + NL+SP +S S S+ + ++N+ S + + PP
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQ-SSNPPQIYPWMK 205
Query: 143 KLRKMNEVEEVDGET 157
++ +GET
Sbjct: 206 RVHLGQSTVNANGET 220
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.66
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 83 LNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNSCASIRLNPRPPDDIEPPA 142
L++ + PG + NL+SP +S S S+ + ++N+ S + + PP
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQ-SSNPPQIYPWMK 205
Query: 143 KLRKMNEVEEVDGET 157
++ +GET
Sbjct: 206 RVHLGQSTVNANGET 220
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 26.2 bits (55), Expect = 0.66
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 83 LNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNSCASIRLNPRPPDDIEPPA 142
L++ + PG + NL+SP +S S S+ + ++N+ S + + PP
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQ-SSNPPQIYPWMK 205
Query: 143 KLRKMNEVEEVDGET 157
++ +GET
Sbjct: 206 RVHLGQSTVNANGET 220
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 26.2 bits (55), Expect = 0.66
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 83 LNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNSCASIRLNPRPPDDIEPPA 142
L++ + PG + NL+SP +S S S+ + ++N+ S + + PP
Sbjct: 103 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQ-SSNPPQIYPWMK 161
Query: 143 KLRKMNEVEEVDGET 157
++ +GET
Sbjct: 162 RVHLGQSTVNANGET 176
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.66
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 83 LNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNSCASIRLNPRPPDDIEPPA 142
L++ + PG + NL+SP +S S S+ + ++N+ S + + PP
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQ-SSNPPQIYPWMK 205
Query: 143 KLRKMNEVEEVDGET 157
++ +GET
Sbjct: 206 RVHLGQSTVNANGET 220
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.66
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 83 LNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNSCASIRLNPRPPDDIEPPA 142
L++ + PG + NL+SP +S S S+ + ++N+ S + + PP
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQ-SSNPPQIYPWMK 205
Query: 143 KLRKMNEVEEVDGET 157
++ +GET
Sbjct: 206 RVHLGQSTVNANGET 220
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 25.8 bits (54), Expect = 0.87
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 11 GTESPGSP--NIFEEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPLDVPS 59
G+ + SP N+ + S + E+D++I P D D EG L +P+
Sbjct: 205 GSPTDHSPVLNLSKSGGGSAGSLEDDDNISDPEDDDDKDQDMDEGDLPLPA 255
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 24.6 bits (51), Expect = 2.0
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 149 EVEEVDGETCPICLDSWGNSGDHRLVALRC 178
++E+V GE C IC+++ +R V +C
Sbjct: 720 KLEKVPGECCAICVNATSLVESNRNVPQKC 749
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 23.8 bits (49), Expect = 3.5
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 12 TESPGSPNIFEE 23
TE+PG PN FEE
Sbjct: 319 TETPGMPNDFEE 330
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 23.0 bits (47), Expect = 6.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 110 SDESTRQSINEDSNSCAS 127
SD R+S N D NSC+S
Sbjct: 4 SDHFDRESPNIDHNSCSS 21
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 23.0 bits (47), Expect = 6.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 8 QSQGTESPGSPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDP 50
+ G+ +P S PE+ AA+ + PS+ RS DP
Sbjct: 32 EDTGSMTPNSAASPAPPEEE-AASPTPGDVPTPSSPRSISEDP 73
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.315 0.130 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,543
Number of Sequences: 317
Number of extensions: 6372
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 15
length of query: 609
length of database: 114,650
effective HSP length: 61
effective length of query: 548
effective length of database: 95,313
effective search space: 52231524
effective search space used: 52231524
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)
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