Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001710-TA|BGIBMGA001710-PA|IPR001841|Zinc finger,
RING-type, IPR011046|WD40-like
(609 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 50 7e-07
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 43 1e-04
SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces pomb... 40 0.001
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 39 0.002
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 39 0.002
SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 38 0.003
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 37 0.009
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 36 0.012
SPCC63.05 |||TAP42 family protein |Schizosaccharomyces pombe|chr... 35 0.029
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 34 0.050
SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyc... 34 0.066
SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8 |Schizosacch... 33 0.087
SPAC3A12.03c |mug145||ubiquitin-protein ligase E3 |Schizosacchar... 33 0.12
SPCC126.07c |||human CTD-binding SR-like protein rA9 homolog|Sch... 33 0.12
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 33 0.15
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 32 0.27
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 31 0.35
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 31 0.35
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 31 0.46
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 31 0.46
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 31 0.46
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 31 0.61
SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 31 0.61
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 30 0.81
SPCC576.01c ||SPCPB1C11.04c|sulfonate dioxygenase |Schizosacchar... 30 0.81
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 30 0.81
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces... 29 1.4
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 29 1.4
SPBC28F2.09 |||transcription factor TFIIA complex large subunit ... 29 1.9
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 29 1.9
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 29 1.9
SPBC17A3.10 |pas4||peroxisomal ubiquitin-protein ligase E3 |Schi... 29 2.5
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 29 2.5
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 28 3.3
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 28 3.3
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 28 3.3
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 28 3.3
SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces pombe... 28 3.3
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 28 4.3
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 28 4.3
SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 28 4.3
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 28 4.3
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 28 4.3
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 27 5.7
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 5.7
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 5.7
SPAC343.03 |apc11||anaphase-promoting complex subunit Apc11|Schi... 27 5.7
SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces pomb... 27 10.0
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 50.4 bits (115), Expect = 7e-07
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 157 TCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCK 205
TCPIC D + + + + CGH+FG C+++WL+ TCP C+
Sbjct: 106 TCPICYDDMNENDEKQATKMPCGHIFGKNCLQKWLE----NHCTCPLCR 150
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 178 CGHLFGSECVERWLKAQKLKDRTCPTCKGKANLKDLRFIYARRLVAADTSQITALQK--- 234
CGHL+ S C+E WLK +CP CK K N + +I R + + +T K
Sbjct: 1107 CGHLYCSFCLEAWLK----HSSSCPMCKTKLNKNNAYYIGESRDIYSRQEFVTGFNKRDE 1162
Query: 235 QVEILQSEKSRTELELE 251
++EIL E R +E
Sbjct: 1163 RLEILDDEAYRQISNME 1179
>SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 372
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 155 GETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTC 204
G C ICL+S+ GD ++VAL C H F C+ +W+ + CPTC
Sbjct: 318 GVECVICLESF-TKGD-KVVALPCKHEFHRPCIAKWIVDYR---HACPTC 362
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 132 PRP-PDDIEPPAKLRKM-NEVEEVDGETCPICLDSWGNSGDHRLVALRCGHLFGSECVER 189
P P P+D+ K++K E+ + +GE C IC++ + + D ++ L C H F C++
Sbjct: 369 PAPAPEDVIAKMKVQKPPKELIDEEGE-CTICMEMFKINDD--VIQLPCKHYFHENCIKP 425
Query: 190 WLKAQKLKDRTCPTCK 205
WL+ + TC C+
Sbjct: 426 WLRV----NGTCAICR 437
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 156 ETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGK 207
E C +CL ++ + + R + +C H F EC+++WL + + +CP C+ K
Sbjct: 523 ERCLVCLSNFELNDECRRLK-QCNHFFHRECIDQWLTSSQ---NSCPLCRTK 570
>SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 468
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 158 CPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGK 207
CPIC ++ R CGH + EC+ WLK K +CPTC+ K
Sbjct: 85 CPICTEAL-----QRPFTTHCGHTYCYECLLNWLKESK----SCPTCRQK 125
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 36.7 bits (81), Expect = 0.009
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 6/120 (5%)
Query: 347 HPKPIRDITYSQHRDLLLSVALDSTARI--VERGILSVTVNSGMPLWSC---SWDNLRSN 401
H +PIRD+++SQ LS + D T ++ E G NS L +C D + N
Sbjct: 309 HARPIRDLSFSQDGRSFLSTSFDKTIKLWDTELGKCLNCFNSDR-LTNCVKFQVDPDKPN 367
Query: 402 EFYXXXXXXXIHHYDVRNPSTYLRMLSSPGDLSPVVSLCSTEYGLLSCQLNSSKLWAVNT 461
EF I +D+R+P G ++ + L + + + + +S + W T
Sbjct: 368 EFLAGTADKRILQFDIRSPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGT 427
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 36.3 bits (80), Expect = 0.012
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 156 ETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCK 205
++C ICL+++ N GD C H F C+++WL + +CP C+
Sbjct: 764 DSCLICLETYTN-GDICRKLQACKHFFHQACIDQWLTT---GNNSCPLCR 809
>SPCC63.05 |||TAP42 family protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 323
Score = 35.1 bits (77), Expect = 0.029
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 239 LQSEKSRTELELEKMKIAHRACVQQLEGLRSTLMKSQSNKEQPSRKSWRFALEKNLE 295
+Q EK +TE + +KIA Q LE L K E+ RK W L+ +E
Sbjct: 108 MQDEKPKTEADTRTLKIARYRMRQNLEKELKALSKDSETNEEQERKFWLTKLQIAVE 164
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 34.3 bits (75), Expect = 0.050
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 7 AQSQGTESPGSPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPLDVPSDEPIQID 66
+ S+G++S S + E S + + D S S S D D S D S+ +
Sbjct: 211 SSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSK-- 268
Query: 67 LAGPLRYDNDDSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNS 124
D+D S+++ + + ++SE S+ S TS S +S S +ED NS
Sbjct: 269 -------DSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNS 319
Score = 31.5 bits (68), Expect = 0.35
Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Query: 7 AQSQGTESPGSPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPLDVPSDEPIQID 66
+ S+G++S S + E S + + D S S S D D S D S+ +
Sbjct: 157 SSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGS 216
Query: 67 LAGPLRYDNDDSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNSCA 126
+ ++ + + N + ++SE S+ S +S S +S +S ++DS+S +
Sbjct: 217 DSSSSSSSSESESSSEDND--SSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSS 274
Query: 127 S 127
+
Sbjct: 275 N 275
Score = 31.1 bits (67), Expect = 0.46
Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Query: 7 AQSQGTESPGSPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPLDVPSDEPIQID 66
+ S+ ++S S + E S + + + S S S D+D S D S+ +
Sbjct: 139 SSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDS 198
Query: 67 LAGPLRYDNDDSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNSCA 126
+ D++ + + + + ++SE S+ + +S S +S +S +EDS+S +
Sbjct: 199 DSSSSSSDSESESSSEGSD--SSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSS 256
Query: 127 S 127
S
Sbjct: 257 S 257
Score = 28.3 bits (60), Expect = 3.3
Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Query: 15 PGSPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPLDVPSDEPIQIDLAGPLRYD 74
P + E S ++++ + S S S D+D S D S+ + + D
Sbjct: 93 PEKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSD 152
Query: 75 NDDSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNSCAS 127
++ + + + + ++SE S+ + +S S +S +S +EDS+S +S
Sbjct: 153 SESESSSEGSD--SSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSS 203
>SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 489
Score = 33.9 bits (74), Expect = 0.066
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Query: 143 KLRKMNEVEEVDGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCP 202
K +++ E+ D CP+C++ S D +CG+ C W ++ + CP
Sbjct: 3 KTQEIYSSEDEDDMCCPLCMEEIDIS-DKNFKPCQCGYRVCRFC---WHHIKEDLNGRCP 58
Query: 203 TCKGKANLKDLRFIYARRLVAADTSQITALQKQVEILQSEKSRTELELEKMK-IAHRACV 261
C+ +++++ R V A+ ++ L ++ E + EK R E+EL K +A+ V
Sbjct: 59 ACRRLYTEENVQW----RPVTAEEWKMD-LHRKNERKKREKERKEVELSNRKHLANIRVV 113
Query: 262 QQLEGLRSTLMKSQSNKE 279
Q+ + L +N+E
Sbjct: 114 QKNLAYVNGLSPKVANEE 131
>SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 33.5 bits (73), Expect = 0.087
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 139 EPPAKLRKMNEVEEVDGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKD 198
E P+K + + + + C ICLDS N L CGH+F + C+ L
Sbjct: 187 EEPSKKQVVPSSQRLADYKCVICLDSPEN-----LSCTPCGHIFCNFCILSALGTTAATQ 241
Query: 199 RTCPTCKGKAN 209
+ CP C+ K +
Sbjct: 242 K-CPVCRRKVH 251
>SPAC3A12.03c |mug145||ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 152 EVDGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTC 204
E + + C IC + + D L L C H+F ++C++ W+ K +CP C
Sbjct: 199 EDEEDFCIICYADY--AFDDILRVLPCEHVFHTQCIDTWMTTMK---ASCPLC 246
>SPCC126.07c |||human CTD-binding SR-like protein rA9
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 571
Score = 33.1 bits (72), Expect = 0.12
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 172 RLVALRCGHLFGSECVERWLKAQKLKDRTCPTCK 205
R+ + CGH F + C+E W + TCP C+
Sbjct: 50 RIAKIPCGHYFHNHCLESWCRVA----NTCPLCR 79
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 32.7 bits (71), Expect = 0.15
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 2 SQYPTAQSQGTESPGSPNIFEEPEQSF--AAAENDNHIDLPSTSRSHDHDPS 51
+Q P QSQ + +P + I +EP SF + E DN D+P SH +PS
Sbjct: 83 NQSPLNQSQSSANPVTFEIADEPSPSFNHSFFEKDNARDIPQ-QPSHSQNPS 133
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 31.9 bits (69), Expect = 0.27
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 83 LNIIINGPGHLPAQSEDSNLTSPLTSF---SDESTRQSINEDSNSCASIRLNPRPPD 136
L + GHLP++S S+ S SF SDE + S++ D S +++ NPR D
Sbjct: 294 LGPVYENSGHLPSKSHFSSTDSNTDSFGLESDERSLPSVSNDLKSSETLK-NPRNDD 349
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 31.5 bits (68), Expect = 0.35
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 176 LRCGHLFGSECVERWLKAQKLKDRTCPTCK 205
L CGH+ C+ WL+ Q +TCP C+
Sbjct: 326 LPCGHILHFHCLRNWLERQ----QTCPICR 351
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 31.5 bits (68), Expect = 0.35
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 157 TCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGKANLKDLRF 215
TC +CL+ +S L+ + C H F C+++W + +CP C+ ++ F
Sbjct: 207 TCVVCLERM-DSSITGLITIVCQHTFHCPCLQKW------GNSSCPVCRYTQKVQSSEF 258
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 31.1 bits (67), Expect = 0.46
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 18/105 (17%)
Query: 35 NHIDLPST-SRSHDHDPSEGPLDVPSDEPIQIDLAGPLRYDNDDSNDTVLNIIINGPGHL 93
N +DL + SR+ D E P PS+E +Q +N DS+D L I G G +
Sbjct: 130 NTVDLDAIISRNRKPDDDEFPSSFPSEEELQEP-----EQENIDSDDEDLAIDGFGAGAI 184
Query: 94 PAQSEDSN-----------LTSPLTSFSDESTRQSINEDSNSCAS 127
++S+ +T P+ SF++ ST Q N DS + +S
Sbjct: 185 AENEDESSQDESESEEEDDITEPVPSFANIST-QDFNSDSAAGSS 228
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 31.1 bits (67), Expect = 0.46
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 60 DEPIQIDLAGPLRYD--NDDSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQ- 116
+E IQ D+A + D ++D +D + I+ G L Q + L ++ ES R
Sbjct: 2022 EELIQPDVAVDPKLDITSEDYDDRIATIL---SGSLRRQKQG------LMAYETESFRDY 2072
Query: 117 SINEDSNSCASIRLNPRPPDDIEPPAKLRKMNEVEEVDGETCPICLDSWGNSGDHRL 173
S NE+ ++ A + ++ PP + + + K+ +D E+ L + GNS +HRL
Sbjct: 2073 SPNEEIDASAKLPMD-MPPVRVRKSSFISKLKPHYFMDAESYYPSLKALGNSAEHRL 2128
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 31.1 bits (67), Expect = 0.46
Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
Query: 357 SQHRDLLLSVALDSTARIVER----GILSVTVNSGMPLWSCS--WDNLRSNEFYXXXXXX 410
S+ ++ L+ ++D + + +L V G+P W+ S W N Y
Sbjct: 361 SEESNIFLTTSIDGVMNVWDHRMVDSVLKYPVPKGVPPWAMSACWSP-DGNNIYIGRRNG 419
Query: 411 XIHHYDVRNPSTYLRMLSSPGDLSPVVSLCSTEYG 445
+ Y++ + +R L P D PV ++ S G
Sbjct: 420 IVEEYNIHSGKEPVRSLKMPLDSGPVSNVYSMPNG 454
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 30.7 bits (66), Expect = 0.61
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 178 CGHLFGSECVERWLKAQKLKDRTCPTCKGKANLKDLRFIY 217
CGH F S C+E + + K TCP C+ ++ D+ I+
Sbjct: 655 CGHAFCSNCMEPFYEH---KTSTCPQCETPFSVSDILTIH 691
>SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 701
Score = 30.7 bits (66), Expect = 0.61
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 236 VEILQSEKSRTELELEKMKIAHRACVQQLEGLRSTLMKSQSNKEQ 280
+E L+SE S + ++K+ +R C Q L+ + +++ SQ+ KE+
Sbjct: 418 LEFLRSEASSLDCLIDKVNGTYRHCCQALDEIINSVKSSQNMKEK 462
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 30.3 bits (65), Expect = 0.81
Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 12/133 (9%)
Query: 95 AQSEDSNLTSPLTSFSDESTRQSINEDSNSCASIRLN-PRPPDDIEPPAKLRKMNEVEEV 153
++ + +L S +S S++ S+N S + P+ +I+ L K++ +
Sbjct: 127 SEKQAVDLKSSNSSQETSSSKGSVNNKSERSREAKSRMPKNSKEIKKGLDLSKLDMTSRM 186
Query: 154 DGET------CPICLDSWGNSGDHRLVALRCGHLFGSECVERWLK---AQKLKDR-TCPT 203
E C +C D+ N C H+F C+ +W K Q+ +D CP
Sbjct: 187 IVELKNRLYECSVCTDTI-NPSTSIWSCGTCYHVFHLSCIRKWCKNSIEQRNEDAWRCPY 245
Query: 204 CKGKANLKDLRFI 216
C+ L ++
Sbjct: 246 CQSNQTETSLHYL 258
>SPCC576.01c ||SPCPB1C11.04c|sulfonate dioxygenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 413
Score = 30.3 bits (65), Expect = 0.81
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 322 NYLFPGFGIRKISCVDYKLGQFVHLHPKPIRDITYSQHRD 361
NY PG ++ C D+K G FV H + + +RD
Sbjct: 346 NYQRPGINPERVYCHDWKNGDFVIFHNRGVTHCITGAYRD 385
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 30.3 bits (65), Expect = 0.81
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 356 YSQHRDLLLSVALDSTARI----VERGILSVTVNSGMPLWSCSWDNLRSNEFYXXXXXXX 411
YS+ +LLS + D TA+I +E S V S + + +WD N F+
Sbjct: 306 YSKAPSVLLSGSYDKTAKIADLRLEEAPSSFQVTSDVE--NVAWDQHSENNFFIGTDNGI 363
Query: 412 IHHYDVRNPS 421
+++ D RN S
Sbjct: 364 VYYCDARNLS 373
>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 967
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 12 TESPGSPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPLDVPSDEPIQIDLAGPL 71
+ S P++F + +F +N N S +R D DP++ L S E DL +
Sbjct: 504 SRSSHRPSVFRDNSVAFGQLDNGN---TSSRARDKDADPNKS-LSC-SVEDKHYDLHSAV 558
Query: 72 RYDNDDSNDTVLNIIINGPG 91
+N++ ++ +LN+ N G
Sbjct: 559 AEENEEVDEELLNVPSNNQG 578
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/79 (21%), Positives = 37/79 (46%)
Query: 227 SQITALQKQVEILQSEKSRTELELEKMKIAHRACVQQLEGLRSTLMKSQSNKEQPSRKSW 286
SQ A+ +E +++ R + L + + CV ++ + + + + SN ++W
Sbjct: 166 SQFAAVPINLEEMEAATIRDVISLAFPVLDSKNCVFIMDEIITVFINNSSNDPNLISENW 225
Query: 287 RFALEKNLEICKDGGCRVL 305
F +K L++ K G V+
Sbjct: 226 DFVWKKLLQLVKTDGLAVV 244
>SPBC28F2.09 |||transcription factor TFIIA complex large subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 369
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 47 DHDPSEGPLDVPSDEPIQIDLAGPLRYDNDDSNDT 81
+ D + P+D PSDE I DL P D+D++ +T
Sbjct: 285 NEDEKKPPVDTPSDEAINSDLDDP---DSDEAPET 316
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 17 SPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPLDVPSDEPIQIDLAG 69
SP + P E D+ + P + +HD + +G PSD + DL G
Sbjct: 230 SPQPYVRPTSDERPIETDSSVSAPKVA-NHDEELKQGKSTSPSDTVLHPDLNG 281
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 389 PLWSCSWDNLRSNEFYXXXXXXXIHHYDVRNPSTY-LRMLSSPGDLSPVVSLCSTEYGLL 447
PL+SC D++ S F+ H+ + P Y + +P ++ ++ S +
Sbjct: 563 PLYSCGLDSIHSVRFFHAIQS----HFHLEGPIRYNMNSNCTPNSIASIIQKKSYNVSSI 618
Query: 448 SCQLNSSKLWAVNTRQCEPRVLPVEGSFMSL 478
+ +L + A++ + +LP G + L
Sbjct: 619 TYELLNEDACALSRTIPKLSILPTNGQYFLL 649
>SPBC17A3.10 |pas4||peroxisomal ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 306
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 171 HRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCK 205
H A CGH+F C+ W K CP C+
Sbjct: 264 HCPAATECGHIFCWSCINGWTS----KKSECPLCR 294
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Query: 156 ETCPICLDSWGNSGDHRLVALRCG---HLFGSECVERWLKAQKLKDRTCPTCK 205
E C IC S + L RCG H F + C+ +W K+ CP C+
Sbjct: 1556 EECAICYSVL--SVERTLPNKRCGTCRHKFHASCLYKWFKSS--NSSRCPLCR 1604
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 9/48 (18%)
Query: 158 CPIC-LDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTC 204
C +C + W + R+++L CGH F +C+++ ++ + R CP C
Sbjct: 627 CSVCNFERWKD----RIISL-CGHGFCYQCIQKRIET---RQRRCPIC 666
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 28.3 bits (60), Expect = 3.3
Identities = 40/153 (26%), Positives = 58/153 (37%), Gaps = 19/153 (12%)
Query: 311 TYELYVSQKSVNYLFPGFGIRKISCVDYKLGQFVHLHPKPIRDITYSQHRDLLLSVALDS 370
TY + Q + FPG D L +FV P+ + +S R L++S +L S
Sbjct: 282 TYSTVLKQDELLITFPGTHHSAFCLGDAVLRRFVFRSPRSASNYEFSNLRRLMVSESLYS 341
Query: 371 TARIVERGILSVTVNSGMPLWSCSWDNLRSNEFYXXXX-XXXIH--------HYDVRNPS 421
+ S+ +S P +CS L +EFY IH H V N S
Sbjct: 342 SK--------SLWPHSHKPQRACSQKFL--DEFYLHDLPESNIHDSGNFHPIHSSVDNNS 391
Query: 422 TYLRMLSSPGDLSPVVSLCSTEYGLLSCQLNSS 454
R SP ++P L S + NS+
Sbjct: 392 FSQRDFDSPNSINPPSPLMSNHESASTEHFNST 424
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 112 ESTRQSINEDSNSCASIRLNPRPPDDIEPPAKLRKMNEVEEVDGET 157
E+ ++ SN +I PD+ E P KL K N VE +D +
Sbjct: 111 ENDFATVQSASNGVHAINGKRTHPDESENPRKLPKKNFVEAIDANS 156
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 223 AADTSQITALQKQVEILQSEKSRTELELEKMK 254
++D QIT ++Q E L+SEK RTE EL K
Sbjct: 1475 SSDAEQIT--KEQFEQLKSEKERTEKELADSK 1504
>SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 28.3 bits (60), Expect = 3.3
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 9/112 (8%)
Query: 16 GSPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPL---DVPSD-EPIQI-DLAGP 70
G PN E+ + ++ N+ + + HD + L D+ S+ EP I D G
Sbjct: 16 GPPNTASFKEEEHSGSQTKNYPVVVKCIQEHDPVDTTNVLVADDLDSNFEPFSITDDYG- 74
Query: 71 LRYDND--DSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINE 120
+Y+N + T+LN N + S TSP + S +S R + E
Sbjct: 75 -KYENTLVSHSSTILNEPYNESPSSSSSDSSSRSTSPFSQLSSQSLRLNAEE 125
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Query: 5 PTAQSQGTESPGSPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGP-LDVPSDEPI 63
P Q+ G PN+ +S E+ P+ S S S+ ++ PS E
Sbjct: 1221 PKKQTANRRQSGKPNV-----KSAQKIESATRTPSPAISESRKKPSSKDTKIETPSREQS 1275
Query: 64 QIDLAGPLRYDNDDSN 79
+ A P++ + DD N
Sbjct: 1276 RSQTASPVKSEKDDGN 1291
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 16/64 (25%)
Query: 154 DGETCPICLD-----SWGNSGDHRLVALR-------CGHLFGSECVERWLKAQKLKDRTC 201
D CPIC+ S G++ + + +R C HL+ +C+ +W++ + + C
Sbjct: 611 DANVCPICMQPIELVSTGSTLNPASMMVRRNYMLTPCHHLYHRQCLLQWMETRSI----C 666
Query: 202 PTCK 205
P C+
Sbjct: 667 PVCR 670
>SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 418
Score = 27.9 bits (59), Expect = 4.3
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 33 NDNHIDLPSTSRSHDHDPSE-GPLDVPSDEPIQIDLAGPLRYDNDDSNDTVLNIIINGPG 91
ND +I LP S + ++ ++VPSD + D S+ T L +N
Sbjct: 171 NDKNILLPEQSPLSNFSTTKISSINVPSDI-LDFSNLSSNEIPKDYSSSTAL---LN--- 223
Query: 92 HLPAQSEDSNLTSPLTSFSDESTRQSINEDSNSCASIRLNPRPPDDIEPPAKL----RKM 147
+ A +D L++ T S S + I +SNSC++I +N D++ P + L +K+
Sbjct: 224 NTVAVKQDHKLSAN-TFLS--SPVKLIERESNSCSTISINKE--DEVVPKSPLSLDRKKV 278
Query: 148 NEVEE 152
+EVEE
Sbjct: 279 DEVEE 283
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Query: 227 SQITALQKQVEILQSE-KSRTELELEKMKIAHRACVQQLEGLRSTLMKSQSNKEQPSRKS 285
S I AL+K + L + S E L +K A + + + L S K+ +EQ ++++
Sbjct: 124 SHIEALRKVYDDLYKKFSSEKETLLNSVKRAKVSYHEACDDLESARQKNDKYREQKTQRN 183
Query: 286 WRFALEKNLEICKDGGCRVLTYNCRTYELY 315
+ + L+ R+L YN + Y
Sbjct: 184 LKLSESDMLDKKNKYLLRMLVYNAHKQKFY 213
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 64 QIDLAGPLRYDNDDSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSN 123
Q D L+Y+N S + VL ING + + + +T+P+ S + + +S+++
Sbjct: 41 QEDAVHDLKYENFVSKNHVLQSDINGKKRDSNRDKAAVVTAPIASTHESNYEESVSKFKE 100
Query: 124 S 124
S
Sbjct: 101 S 101
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 27.5 bits (58), Expect = 5.7
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 14/118 (11%)
Query: 100 SNLTSPLTSFSD-ESTRQSINEDSNSCASIRLNPRPPDDIEPPAKLRKMNEVEEVDGETC 158
SN+T +F D E + + N N + P P D + K+ + E + E C
Sbjct: 824 SNMTINSETFDDFEFSVEQFNSLINQFV-VTGKPIPSDIL----KIDTLKSFEALITE-C 877
Query: 159 PICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKD---RTCPTCKGKANLKDL 213
PIC N + L C H +C+ ++ QK ++ C TC+ N +D+
Sbjct: 878 PICC----NEPIQNPLLLNCKHACCGDCLSEHIQYQKRRNIIPPLCHTCRQPFNEQDV 931
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 171 HRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGKANLK 211
++ V L C H+F C+ + QK K CP C+ K +K
Sbjct: 368 YKPVRLGCSHVFCLHCL---IILQKQKVDFCPLCRAKEVMK 405
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.5 bits (58), Expect = 5.7
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 233 QKQVEILQSEKSRTELELEKM-----KIAHRAC--VQQLEGLRSTLMKSQSNKEQPSRK 284
QK+ E L+ EK R + E EK KIA + +++LE R L + Q KE+ +K
Sbjct: 92 QKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERIRLQEQQRRKEERDQK 150
>SPAC343.03 |apc11||anaphase-promoting complex subunit
Apc11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 94
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 158 CPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCP 202
CP C N +V +C H+F + C++ WL A CP
Sbjct: 35 CPQCTSPGDNCP---IVWGKCKHIFHAHCIQNWL-ATSGSQGQCP 75
>SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 73 YDNDDSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNS 124
Y +D + +++ G P +D+NLT+P T + + R+ + + S S
Sbjct: 181 YKEFSDDDPIQFPLLSVDGDSPLTEKDTNLTTPATLKASDQQRKVLEKPSVS 232
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.130 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,916,346
Number of Sequences: 5004
Number of extensions: 128886
Number of successful extensions: 507
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 465
Number of HSP's gapped (non-prelim): 69
length of query: 609
length of database: 2,362,478
effective HSP length: 77
effective length of query: 532
effective length of database: 1,977,170
effective search space: 1051854440
effective search space used: 1051854440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)
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