Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001710-TA|BGIBMGA001710-PA|IPR001841|Zinc finger,
RING-type, IPR011046|WD40-like
(609 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34466| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 4e-20
SB_43778| Best HMM Match : zf-XS (HMM E-Value=1.1) 47 4e-05
SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-04
SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18) 42 0.001
SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12) 41 0.003
SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018) 40 0.006
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 40 0.008
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 38 0.024
SB_23934| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 38 0.024
SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.031
SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.041
SB_39560| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00055) 37 0.041
SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.041
SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.13
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 35 0.17
SB_56526| Best HMM Match : EPTP (HMM E-Value=3.2) 35 0.17
SB_41318| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.17
SB_23698| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.17
SB_33716| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.29
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 34 0.29
SB_23054| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.38
SB_45545| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 33 0.51
SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.51
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 33 0.51
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 33 0.67
SB_25491| Best HMM Match : Peptidase_M50 (HMM E-Value=2.2) 33 0.67
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 33 0.67
SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061) 33 0.67
SB_6591| Best HMM Match : UCH (HMM E-Value=0.00022) 33 0.88
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 33 0.88
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 33 0.88
SB_59594| Best HMM Match : zf-C3HC4 (HMM E-Value=0.21) 32 1.2
SB_55976| Best HMM Match : zf-C3HC4 (HMM E-Value=0.087) 32 1.2
SB_41985| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.2
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.2
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 32 1.2
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 32 1.2
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.2
SB_51079| Best HMM Match : zf-C3HC4 (HMM E-Value=0.19) 32 1.5
SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.5
SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28) 32 1.5
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14) 32 1.5
SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29) 32 1.5
SB_56738| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 31 2.0
SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11) 31 2.0
SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 31 2.7
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.7
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08) 31 2.7
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 31 2.7
SB_45619| Best HMM Match : M (HMM E-Value=0.01) 31 2.7
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.6
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 31 3.6
SB_48225| Best HMM Match : DUF234 (HMM E-Value=5.3) 30 4.7
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08) 30 4.7
SB_8003| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.7
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 30 4.7
SB_28258| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.7
SB_26243| Best HMM Match : ACN9 (HMM E-Value=0.87) 30 4.7
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.7
SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05) 30 6.2
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 30 6.2
SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011) 30 6.2
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.2
SB_10324| Best HMM Match : IFP_35_N (HMM E-Value=0.1) 29 8.2
SB_1411| Best HMM Match : PT (HMM E-Value=0.079) 29 8.2
SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08) 29 8.2
SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034) 29 8.2
>SB_34466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 97.1 bits (231), Expect = 4e-20
Identities = 71/228 (31%), Positives = 120/228 (52%), Gaps = 32/228 (14%)
Query: 184 SECVERWLKAQKLKDRTCPTCKGKANLKDLRFIYARRLVAADTSQ----ITALQK----- 234
S C+ERWLKA+ D+ CP C A KD+R IYA+ L DT++ + L+K
Sbjct: 153 SRCIERWLKAKGGSDK-CPQCNAPAKKKDIRNIYAKALKTIDTAEKDRALADLEKERVQR 211
Query: 235 ------------QVEILQSEKSRTELELEK--MKIAHR---ACVQQLEGLRSTLMKSQSN 277
Q +++++E R + +L + +++A + +C + + T QS+
Sbjct: 212 QKAEQGEARALLQYQLVKAECERIKSQLHQYELQLARQGPHSCTCGKQPVTGTRTHGQSS 271
Query: 278 KEQPSRKSWRFALEKNLEICKDGGCRVLTYNCRTYELYVSQKSVNYLFPGFGIRKISCVD 337
+ + + ++++ ++ GG RV+ ++ L VS+ S N LFPG+G+ K+S +D
Sbjct: 272 SQLLTSNK-TYVMQRSFQVAA-GGARVMAFDEHHALLVVSKPSPNQLFPGYGVVKVSSLD 329
Query: 338 YKLGQFVHLHPKPIRDITYSQHRD-LLLSVALDSTARIVERGILSVTV 384
K +FV +H KPIRD +S D LLL+ +D T +I +LS TV
Sbjct: 330 VKHSEFVRIHQKPIRDACFSCQGDGLLLTAGMDKTIQIT--SMLSNTV 375
>SB_43778| Best HMM Match : zf-XS (HMM E-Value=1.1)
Length = 211
Score = 47.2 bits (107), Expect = 4e-05
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 187 VERWLKAQKLKDRTCPTCKGKANLKDLRFIYARRLVAADTSQITALQKQVEILQSEKSRT 246
VERWLKA+ D+ CP C A KD+R IYA+ L DT++ +E + ++ +
Sbjct: 119 VERWLKAKGGSDK-CPQCNAPAKKKDIRNIYAKALKTIDTAEKDRALADLEKERVQRQKA 177
Query: 247 ELELEKMKIAHRACVQQLEGLRSTL 271
E + + ++ + E ++S L
Sbjct: 178 EQGEARALLQYQLVKAECERIKSQL 202
>SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 44.0 bits (99), Expect = 4e-04
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 156 ETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCK 205
+ C ICLD + GD +L L C H + +CV+ WL K RTCP CK
Sbjct: 299 DVCAICLDEY-KEGD-KLRILPCDHAYHCKCVDPWLTEGK---RTCPVCK 343
>SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)
Length = 398
Score = 42.3 bits (95), Expect = 0.001
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 154 DGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGKANLKD 212
+ ++CPICL+ + RL+ CGH + C+ RWL+ + TCP C+ + D
Sbjct: 258 ESKSCPICLEEFTPETPTRLLV--CGHKYCEPCLSRWLE----NNTTCPICRKPTSRND 310
>SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12)
Length = 558
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 158 CPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTC 204
C ICL+ + N D R+V C H F ECV+ WL L + TCP C
Sbjct: 214 CVICLEGFKNGQDLRIVP--CRHEFHKECVDPWL----LSNFTCPLC 254
>SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)
Length = 843
Score = 39.9 bits (89), Expect = 0.006
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 140 PPAKLRKMNEVEEVDGETCPICLDSWGNSGDHRLV-ALRCGHLFGSECVERWLKAQKLKD 198
P R+ + E TCP+C ++G R+ L C H F +EC+ + +K +
Sbjct: 312 PSRNRREQGRMIEKKDLTCPLCYTAYGTGYPQRIPRILDCSHTFCTECIMK-IKELQGDV 370
Query: 199 RTCPTCK 205
CPTCK
Sbjct: 371 VECPTCK 377
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 39.5 bits (88), Expect = 0.008
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 150 VEEVDGE-TCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGKA 208
VEE++ E +C +C + + R L C H F C++ WL+ K TCP C+
Sbjct: 362 VEEMEDEFSCIVCQELF-----IRATTLTCSHSFCEYCLQSWLR----KRNTCPICRCAV 412
Query: 209 NLKDLRFIYARRLVA--ADTSQITALQKQVEILQ--SEKSR 245
+ +R I +A D+ + + +++ +++ +EKSR
Sbjct: 413 QSQPVRSIVLDNAIAKMVDSMDVASKERRRAVMEERAEKSR 453
>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
Length = 380
Score = 37.9 bits (84), Expect = 0.024
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 156 ETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGKANLKDLRF 215
E CPICLD + RC H+F + C+ ++ + L R CP C+ N +L
Sbjct: 63 EECPICLDPLDDPS-----ITRCAHVFCTGCLTDVIENEGLAPR-CPMCRAPVNQNELVK 116
Query: 216 IYARRLVAADTSQ 228
+ RL +T +
Sbjct: 117 VPEERLREKETEK 129
>SB_23934| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 617
Score = 37.9 bits (84), Expect = 0.024
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 158 CPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQK-LKDRTCPTCKGKA 208
C ICLD + L+ L CGH F C+E WL CP C+ A
Sbjct: 560 CVICLDEF--KPGCTLLGLPCGHSFHQHCIEVWLAGDNTAPHHCCPNCRWPA 609
>SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 37.5 bits (83), Expect = 0.031
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 158 CPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCK 205
C ICLD+ ++ V CGHLF C+ RWL+ + + CP CK
Sbjct: 63 CNICLDTARDA-----VISMCGHLFCWPCLHRWLETRPNRS-MCPVCK 104
>SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 37.1 bits (82), Expect = 0.041
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 150 VEEVDGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCK 205
++E+ +CPICL + + + C HLF C+ WL+ K +CP C+
Sbjct: 54 LKELSTSSCPICLGDYEKGESTK--QMPCDHLFHPGCILPWLE----KTNSCPVCR 103
>SB_39560| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00055)
Length = 545
Score = 37.1 bits (82), Expect = 0.041
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 151 EEVDGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKA 193
+++ +C +C+ + N +L L C H F S+C++RWLKA
Sbjct: 354 KDMSNGSCVVCMMDYTNR--EKLRKLPCNHDFHSKCIDRWLKA 394
>SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 37.1 bits (82), Expect = 0.041
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 148 NEVEEVDGETCPICLD---SWGNSGDHRLVAL-RCGHLFGSECVERWLK---AQKLKDRT 200
+ V + TC +CLD S + R L C H F EC+ +W K A+K R
Sbjct: 164 SNVNGSENVTCAVCLDVVMSKPKQSERRFGILPNCIHAFCLECIRKWRKASHAEKKVVRA 223
Query: 201 CPTCK 205
CP C+
Sbjct: 224 CPICR 228
>SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 35.5 bits (78), Expect = 0.13
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
Query: 116 QSINEDSNSCASI--RLNPRP-PDDIEPPAKLRKMNEVEEVD-----GETCPICLDSWGN 167
Q+I ++ + C ++ PRP P I PP + K+ E E+ + G T +C N
Sbjct: 329 QTIPQNRSLCQALIDGSQPRPEPAPITPPDEHVKVTE-EQYELYCEMGSTFQLCKICAEN 387
Query: 168 SGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGKANLKDLRFI 216
+ D R+ CGHL C+E+W Q+ CP C ++ +KD++ +
Sbjct: 388 NKDVRIEP--CGHLMCHLCLEQW---QEKGGDGCPFC--RSPMKDIQTV 429
>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 346
Score = 35.1 bits (77), Expect = 0.17
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 158 CPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGKANLKDLRFIY 217
C IC+ N+ + CGH F C+E WL ++ ++CP+C+ DL ++
Sbjct: 18 CNICVGVLENA-----ITTICGHSFCESCLETWLSRPEV--QSCPSCRSHVLSLDLIPVH 70
Query: 218 ARR 220
A R
Sbjct: 71 AIR 73
>SB_56526| Best HMM Match : EPTP (HMM E-Value=3.2)
Length = 50
Score = 35.1 bits (77), Expect = 0.17
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 567 RTMSLP-ASEPALDVCSVETNGSNILAALSESRLRLYK 603
RT LP EP LDV NGS L ++E +L +YK
Sbjct: 11 RTQKLPDQGEPVLDVKPFAVNGSQFLTTITEQKLNIYK 48
>SB_41318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 35.1 bits (77), Expect = 0.17
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 138 IEPPAK--LRKMNEVEEVDGETCPICLDSWGNSGDHRLVALR---CGHLFGSECVERWLK 192
+EP K ++ +G C IC D S + R CG + +C +W+
Sbjct: 7 LEPATKKFCELAKDIYNSEGLACVICQDDRVTSNSSLTLLDRLPCCGQVCHQQCFWKWIH 66
Query: 193 AQKLKDRTCPTCK 205
+ +D TCP C+
Sbjct: 67 FHRTEDITCPHCR 79
>SB_23698| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 35.1 bits (77), Expect = 0.17
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 158 CPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDR--TCPTCKGKANL 210
C IC++ GN G +L C EC+ RW AQ + R TCP C+ KA+L
Sbjct: 3 CVICIED-GN-GSVKLTDC-CKQRVYQECLGRWNVAQFFRGRHPTCPHCRAKASL 54
>SB_33716| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 922
Score = 34.3 bits (75), Expect = 0.29
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 108 SFSDESTRQSINEDSNSCASIRLNPR-PPDDIEPPAKLRKMNEV------EEVDGETCPI 160
S +D ST S N+ S+ C S +L P PP + P L + EV+G PI
Sbjct: 425 SSTDVSTINSSNQSSSHCNSSQLAPMTPPRNPFSPEMLTSTPNIVTSAHETEVEGHQQPI 484
Query: 161 CLDSWGNSGDHR 172
C S+ G H+
Sbjct: 485 CEGSFAGRGQHK 496
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 34.3 bits (75), Expect = 0.29
Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 191 LKAQKLKDRTCPTCKGKANLKDLRFIYARRLVAADTSQITALQKQVEILQSEKSRTELEL 250
LK Q++K+ + I ++ + AD + ALQKQ+E +++ + + EL
Sbjct: 591 LKLQQVKEEQLQAMASSQDSISKEKIETQQKLQAD---LQALQKQLEEVKAVSTSRQEEL 647
Query: 251 EKMKIAHRACVQQLEGLRSTLMKSQSNKEQPSRKSWRFAL-EKNLEICK 298
+++ +H + + L++ L S S + +S R A+ +KN+E+ K
Sbjct: 648 TQLRASHDEGLSLVSQLQTRLETSGSVDLKSQLESVRIAMKDKNMELAK 696
>SB_23054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 33.9 bits (74), Expect = 0.38
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 155 GETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKL 196
G TC +CL ++ R L+C H+F +C++ WL Q +
Sbjct: 209 GSTCGVCLSAYHPLQYVR--KLQCRHVFHRDCIDSWLATQSI 248
Score = 29.9 bits (64), Expect = 6.2
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 146 KMNEVEEVDGETCPICLDSWGNSGDH-RLVALRCGHLFGSECVERWLKAQKL---KDRTC 201
KM + E + + CPIC D + + CG+ +C++ W + Q+ K C
Sbjct: 67 KMKQKEISEEDVCPICQDELLDKCEPLTYCKYGCGNSVHIKCMKVWAEHQRSTGEKITKC 126
Query: 202 PTCK---GKANLKDLRFIYARRLVAADTSQITALQ 233
P C+ G R+ A R+ ++ I +LQ
Sbjct: 127 PLCRVDFGTFQNASQRWRPASRITPLPSAVIESLQ 161
>SB_45545| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 729
Score = 33.5 bits (73), Expect = 0.51
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 220 RLVAADTSQITALQKQVEILQSEKSRTELELEKMKIAHRACVQQLEGLRSTLMKSQSNKE 279
RL AA + T+L K+ E S R E+E E+ + HR ++Q++ R L +K
Sbjct: 437 RLAAAAAGKSTSLLKEPEKDVSPHIRAEMERERDRERHRLSLEQIDANRRLLHAELKDKV 496
Query: 280 QP 281
P
Sbjct: 497 NP 498
>SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 690
Score = 33.5 bits (73), Expect = 0.51
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 131 NPRPPDDIEPPAKLRKMNEVEE--VDGETCPICLDSWGNSGDHRLVALR-CGHLFGSECV 187
N + D+ AK+R + + + + C IC +G+ ++++ AL CGH F +EC
Sbjct: 283 NEKLQQDLVKQAKIRSGIDTRDWFMVSKECGIC---FGDFRENKMTALMSCGHSFCTECW 339
Query: 188 ERWLKAQ 194
E +LK+Q
Sbjct: 340 EFYLKSQ 346
>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 306
Score = 33.5 bits (73), Expect = 0.51
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 150 VEEVDGET-CPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCP 202
+E+VD C IC + R V CGH F C+E W+ A+ ++ CP
Sbjct: 9 IEKVDPNLLCGICAEVL-----ERAVLTPCGHSFCGVCLETWMNAKLEENEKCP 57
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 33.1 bits (72), Expect = 0.67
Identities = 40/160 (25%), Positives = 62/160 (38%), Gaps = 9/160 (5%)
Query: 8 QSQGTESPGSPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDP-SEGPLDVPSDEPIQID 66
+S TES E A + D +ID S + SEG VP E ++D
Sbjct: 1272 ESLATESSQVEADQEPSSAEVALSSGDPNIDSFLIIESQEGKAESEGTESVPQGEAPEVD 1331
Query: 67 LAGPLRYDNDDSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINED-SNSC 125
+A P + + ++ GH+ A E+ TSP+ S EST + + D
Sbjct: 1332 IAEPTSEETPVEGE---SLEAQAVGHVEAAGEE---TSPVQSNQIESTVEEVPTDVPTES 1385
Query: 126 ASIRLNPRPPDDIEPPAKLRKMNE-VEEVDGETCPICLDS 164
S + P D +E + + VE E P+ D+
Sbjct: 1386 PSAEVKPVQSDIVESTSDEAPAEDLVESHKEEIMPVQSDA 1425
>SB_25491| Best HMM Match : Peptidase_M50 (HMM E-Value=2.2)
Length = 771
Score = 33.1 bits (72), Expect = 0.67
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 26 QSFAAAENDNHIDLPSTSRSHDHDPSEGPLDVPSDEPIQIDLAGPLRYDND 76
+S ++H L SR+ + S PL SD P++ + PLRY++D
Sbjct: 493 ESHTPLRYESHAPLRYESRAPLRNKSHAPLRYESDAPLRYESHAPLRYESD 543
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 33.1 bits (72), Expect = 0.67
Identities = 40/160 (25%), Positives = 62/160 (38%), Gaps = 9/160 (5%)
Query: 8 QSQGTESPGSPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDP-SEGPLDVPSDEPIQID 66
+S TES E A + D +ID S + SEG VP E ++D
Sbjct: 167 ESLATESSQVEADQEPSSAEVALSSGDPNIDSFLIIESQEGKAESEGTESVPQGEAPEVD 226
Query: 67 LAGPLRYDNDDSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINED-SNSC 125
+A P + + ++ GH+ A E+ TSP+ S EST + + D
Sbjct: 227 IAEPTSEETPVEGE---SLEAQAVGHVEAAGEE---TSPVQSNQIESTVEEVPTDVPTES 280
Query: 126 ASIRLNPRPPDDIEPPAKLRKMNE-VEEVDGETCPICLDS 164
S + P D +E + + VE E P+ D+
Sbjct: 281 PSAEVKPVQSDIVESTSDEAPAEDLVESHKEEIMPVQSDA 320
>SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061)
Length = 63
Score = 33.1 bits (72), Expect = 0.67
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 158 CPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGKANLKDLRFIY 217
C IC++ + LV++ C H+ EC R L A+KL CP C + DLR IY
Sbjct: 11 CLICMEPYTVP----LVSISCWHVHCEECWLRTLGAKKL----CPQCNMITSPNDLRKIY 62
>SB_6591| Best HMM Match : UCH (HMM E-Value=0.00022)
Length = 340
Score = 32.7 bits (71), Expect = 0.88
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 30 AAENDNHIDLPSTSRSHDHDPSEGPLDVPSDEPIQIDLAGPLRYDNDDSNDTVLNIIING 89
+++ D + L S S HDPSE +D+ E + A DN +++ L +G
Sbjct: 242 SSDTDEEMQLDSQQASVVHDPSEVQIDIDMAE----EDANLSAIDNSKASNNELMSPKDG 297
Query: 90 PGHLPAQSEDSNLTSPLTSFSDESTRQ 116
P + D+ S L F +T++
Sbjct: 298 ENKRPVSANDAKKNSSLNRFKRSTTKK 324
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 32.7 bits (71), Expect = 0.88
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
Query: 147 MNEVEEVDGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCK 205
M E D CPICL++ + CGH F C+ K+ KL CPTC+
Sbjct: 667 MTEDGAGDSAECPICLETI----TYPETLQGCGHTFCRPCITEASKSSKL----CPTCR 717
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 32.7 bits (71), Expect = 0.88
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
Query: 147 MNEVEEVDGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCK 205
M E D CPICL++ + CGH F C+ K+ KL CPTC+
Sbjct: 742 MTEDGAGDSAECPICLETI----TYPETLQGCGHTFCRPCITEASKSSKL----CPTCR 792
>SB_59594| Best HMM Match : zf-C3HC4 (HMM E-Value=0.21)
Length = 235
Score = 32.3 bits (70), Expect = 1.2
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 138 IEPPAKLRKMNEVEEVDGETCPICLDSWGNSGDHRLVALR---CGHLFGSECVERWLKAQ 194
+EP K + +G C IC D S + R CG + +C +W+
Sbjct: 10 LEPATKKLCELARDNYEGMACVICQDDRVTSNTSLTLLDRLPCCGQVCHQQCFWKWVHFH 69
Query: 195 KLKDRTCPTCK 205
+ + TCP C+
Sbjct: 70 RTETITCPHCR 80
>SB_55976| Best HMM Match : zf-C3HC4 (HMM E-Value=0.087)
Length = 171
Score = 32.3 bits (70), Expect = 1.2
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 157 TCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQ----KLKDRTCPTCK 205
TC +C G L CGH+F EC+ + Q +K TCPT K
Sbjct: 120 TCDVCFSE--KPGSMCLAFHNCGHVFCCECMTGYFTVQINDGSVKALTCPTSK 170
>SB_41985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 32.3 bits (70), Expect = 1.2
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 157 TCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQ----KLKDRTCPTCK 205
TC +C G L CGH+F EC+ + Q +K TCPT K
Sbjct: 212 TCDVCFSE--KPGSMCLAFHNCGHVFCCECMTGYFTVQINDGSVKALTCPTSK 262
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 32.3 bits (70), Expect = 1.2
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 151 EEVDGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGKANL 210
++V TC +CL G D R++A C H + C+E ++ K +CP C+ K +
Sbjct: 10 KDVSDVTCSLCL---GQYQDPRVLA--CLHTYCRHCLESLVEHSKECTVSCPQCREKIEI 64
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 151 EEVDGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGK 207
++V TC +CL+ + D R++A C H + C+E ++ + + +CP C+ K
Sbjct: 10 KDVSDVTCSLCLEQYQ---DPRVLA--CLHTYCRHCLESLVEHSQERTVSCPQCREK 61
>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 462
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 151 EEVDGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGK 207
++V TC +CL+ + D R++A C H + C+E ++ + + +CP C+ K
Sbjct: 10 KDVSDVTCSLCLEQYQ---DPRVLA--CLHTYCRHCLESLVEHSQERTVSCPQCREK 61
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 32.3 bits (70), Expect = 1.2
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 25/139 (17%)
Query: 178 CGHLFGSECVERWLKAQKLKDRTCP-TCKGKANLKDLRFI-YARRLVAADTSQITALQKQ 235
CGH+F S+C+ W+ ++ TCP TC+ A + DL+ I RL++ + Q+
Sbjct: 72 CGHVFCSQCLVHWI----AENGTCPLTCEQLA-IDDLKKIPPLTRLISLLNIRCCNFQRG 126
Query: 236 VEILQSEKSRTELELEKMKIAHRACVQQLEGLRSTLMKSQSNKEQPSRKSWRFALEKNLE 295
+ L +E ++ R C Q EGL S K N + P L +
Sbjct: 127 CPAI--------LRIESIQTHQRKC-QYAEGLTSG-GKIMDNSDSPE-------LSVQVV 169
Query: 296 ICKDG-GCRVLTYNCRTYE 313
+C+ G G +L ++C ++
Sbjct: 170 VCEKGCGLPLLFHDCTEHD 188
>SB_51079| Best HMM Match : zf-C3HC4 (HMM E-Value=0.19)
Length = 337
Score = 31.9 bits (69), Expect = 1.5
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 137 DIEPPAKLRKMNEVEEVDGETCPICLDSWGNSGDHRLVALR---CGHLFGSECVERWLKA 193
D+EP K V + C IC D S + R CG + +C +W
Sbjct: 7 DLEPTYKKLCEQAVNNYEDLACVICQDGRITSNTSVTLLDRLPCCGQVCHQQCFWKWAHY 66
Query: 194 QKLKDRTCPTCK 205
+ + TCP C+
Sbjct: 67 HRTEAVTCPHCR 78
>SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1442
Score = 31.9 bits (69), Expect = 1.5
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 158 CPICLDSWGNSGDHRLVA-LRCGHLFGSECVERWLKA----QKLKDRTCPTCKGKANLKD 212
C +C+D ++R++ L C F S+CV +++K Q + CP C NL+D
Sbjct: 1005 CIVCMDL---KPENRMITMLNCQCRFCSDCVSQYVKQIIQEQNIMHLVCPACSEPKNLED 1061
>SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28)
Length = 552
Score = 31.9 bits (69), Expect = 1.5
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 222 VAADTSQITALQKQVEILQSEKSRTELELEKMKIAHRACVQQLEGLRSTLMKSQSNKEQP 281
VA SQI ALQ++ E L+SE R E ++++ LE RS++ Q+NKE
Sbjct: 171 VAKKESQIQALQQETERLRSEFQRLETDIKER-------TDDLEQRRSSI--EQNNKEYS 221
Query: 282 SRKSWRFAL-EKNLEICKDGGCRVLTYNCRTYELYVSQKSV 321
K R L E+ + T N EL S++ +
Sbjct: 222 ELKRKRDELTNTRKELWRQEAAMEQTINTAREELSKSERGL 262
>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
Length = 594
Score = 31.9 bits (69), Expect = 1.5
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 149 EVEEVDGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGKA 208
+V +V TC +CL+ + D R++A C H + C+E ++ K +CP C+ K
Sbjct: 7 KVGDVKDVTCCLCLEQYQ---DPRVLA--CLHTYCRHCLESLVEHSKECTVSCPQCREKI 61
Query: 209 NL 210
+
Sbjct: 62 EI 63
>SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29)
Length = 690
Score = 31.9 bits (69), Expect = 1.5
Identities = 18/92 (19%), Positives = 45/92 (48%)
Query: 197 KDRTCPTCKGKANLKDLRFIYARRLVAADTSQITALQKQVEILQSEKSRTELELEKMKIA 256
K+ P K +A + ++ +DT ++ LQ+++ + EK++ E E++K++
Sbjct: 590 KEDIQPEVKEQAEGAEPAKVFTVTETVSDTKEVARLQEELNKFKEEKTKFEEEVKKIQEE 649
Query: 257 HRACVQQLEGLRSTLMKSQSNKEQPSRKSWRF 288
+ +L + L+K++ + ++ RF
Sbjct: 650 CTKHLDELSQEKDKLLKAEEECSRLGKEKTRF 681
>SB_56738| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 869
Score = 31.5 bits (68), Expect = 2.0
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 90 PGHLPAQSEDSNLTSPLT----SFSDESTRQSI-NEDSNSCASIRLNPRPPDDIEPP 141
P P S+L+ T + S ES +I NEDS+ + + P PPDDI PP
Sbjct: 31 PARPPVPKRSSSLSDQSTLGTAAVSLESGLDAIGNEDSSRPPPVFIPPPPPDDIPPP 87
>SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11)
Length = 1012
Score = 31.5 bits (68), Expect = 2.0
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 41 STSRSHDHD---PSEGPLDVPSDEPIQIDLAGPLRYDNDDSN--DTVLNIIINGPGHLPA 95
++ R DHD P + LD S +D P D+D ++ D+ LN P P
Sbjct: 220 TSPRDSDHDQTSPCDSDLDQTSPCDSDLDQTSPCDSDHDQTSPCDSDLN---RHPLTSPC 276
Query: 96 QSEDSNLTSPLTSFSDESTRQSINEDSNSCASIRLNPRPPDD 137
S D + TSP S D+++ + + D S + PP D
Sbjct: 277 DS-DHDQTSPRDSDHDQTSPRDSDHDQTSPCDSDHDQTPPRD 317
>SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 228 QITALQKQVEILQSEKSRTELELEKMKIAHRACVQQLEGLRSTLMKSQSNKEQPSRKSWR 287
++ K++E + SE T +L K + ++LE L+ L+K + +Q R+
Sbjct: 159 EVNQQNKEIERILSENKVTLADLSKTQENLMKKAKELEDLQQKLLKQEDTAKQDKRRLQE 218
Query: 288 FALEKNLEICK 298
L K E+ K
Sbjct: 219 VILTKEKELFK 229
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 31.1 bits (67), Expect = 2.7
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 218 ARRLVAADT-SQITALQKQVEILQSEKSRTELELEKMKIAHRACVQQLEGLRSTLMKSQS 276
A+RL A D +++ ++QVE LQS S +++ + QQLE L++ L +S+
Sbjct: 1082 AKRLDAKDLEAKLCEHKQQVEFLQSHMSSVSGQMKGQEAQVTQYTQQLEQLKAALDQSKD 1141
Query: 277 N 277
N
Sbjct: 1142 N 1142
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 31.1 bits (67), Expect = 2.7
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 228 QITALQKQVEILQSEKSRTELELEKMKIAHRACVQQLEGLRSTLMKSQSNKEQPSRK--- 284
+I A K+ E E +RT E++K K A + +++L TLM S+KE+ K
Sbjct: 1295 KIKASLKEAEERFQELNRTLEEVQKEKNALESKIEELTQKSETLMGKHSDKEKELEKATT 1354
Query: 285 -SWRFALEKNLEI 296
S +F+ EK+ I
Sbjct: 1355 ESVKFSHEKDASI 1367
>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
Length = 599
Score = 31.1 bits (67), Expect = 2.7
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 153 VDGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGKANL 210
V TC +CL+ + D R++A C H + C+E ++ K +CP C+ K +
Sbjct: 21 VSDVTCSLCLEQYQ---DPRVLA--CLHTYCRHCLESLVEHSKECTVSCPQCREKIEI 73
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 31.1 bits (67), Expect = 2.7
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 230 TALQKQVEILQSEKSRTELELEKMKIAHRACVQQLEGLRSTLMKSQSNKEQPSRKSWRFA 289
T L+ QVE LQ E + + +LE H+ ++ LE R +++Q + E S + R
Sbjct: 810 TRLEGQVEALQKESNLAKRQLEMDNTHHKNLIKTLEN-RVQELQTQIDTESRSNQQARDM 868
Query: 290 LEKN 293
L +N
Sbjct: 869 LVRN 872
>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
Length = 1315
Score = 31.1 bits (67), Expect = 2.7
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 189 RWLKAQKLKDRTCPTCKGKANLKDLRFIYARRLVAADTSQITALQKQVEILQSEKSRTEL 248
R L A++++ R + K LK Y +L + S+ + LQ+++E LQ E S +
Sbjct: 122 RQLAAEEMRQRLSRADQDKTELKRQLDEYQAKLRDNEASR-SRLQQRLEALQREMSEGQG 180
Query: 249 ELEKMKIAHRACVQQLEGLRSTLMKSQSNKEQ 280
+ +++ ++QL+ LRS + K++ K++
Sbjct: 181 DRQRL-------LEQLDVLRSQVTKAEREKDE 205
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 30.7 bits (66), Expect = 3.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 223 AADTSQITALQKQVEILQSEKSRTELELEKMK 254
A ++ AL+ Q+EI+++EK + ELEK K
Sbjct: 1373 AIHAKELVALKAQIEIIKAEKDKLGKELEKQK 1404
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 30.7 bits (66), Expect = 3.6
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 146 KMNEVEEVDGETCPICLDSWG---NSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCP 202
KM + E + E C C S+ + GD+ L G VE+W++ + CP
Sbjct: 2050 KMFKCSECETEVCTCCHKSYHVGISCGDYALSKTEIGQ---EHLVEKWMREDPSNRKRCP 2106
Query: 203 TCK 205
C+
Sbjct: 2107 KCR 2109
>SB_48225| Best HMM Match : DUF234 (HMM E-Value=5.3)
Length = 242
Score = 30.3 bits (65), Expect = 4.7
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 131 NPRPPDDIEPPAKLRKMNEVEEV 153
NPRP DD +P A+LRK+ + +++
Sbjct: 134 NPRPVDDFQPRAQLRKLFQDKDI 156
>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
Length = 584
Score = 30.3 bits (65), Expect = 4.7
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 149 EVEEVDGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGKA 208
+V +V TC +CL+ + D R++A C H + C+E + + +CP C+ K
Sbjct: 7 KVGDVKDVTCCLCLEQYQ---DPRVLA--CLHTYCRHCLESLAEHSQGDSISCPQCREKI 61
Query: 209 NL 210
+
Sbjct: 62 QI 63
>SB_8003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 30.3 bits (65), Expect = 4.7
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 178 CGHLFGSECVERWLKAQKLKDR--TCPTCKGKANLKDLRFIYARRL 221
C SEC+ +W AQ ++ TCP C+ ++ YA RL
Sbjct: 21 CTQKIHSECLTQWNNAQAANNQQQTCPFCRSDEPHNPIQSPYAARL 66
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 30.3 bits (65), Expect = 4.7
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 213 LRFIYARRLVAADTSQITALQKQVEILQSE-KSRTELELEKMKIAHRACVQQLEGL 267
L+F R V + I L+KQV +++ E +++TEL +E +K + + +L+ +
Sbjct: 859 LKFPVCERQVKRTSEAILLLEKQVNLVRQEIRAKTELIIETLKSHEQRMMAKLDNI 914
>SB_28258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 30.3 bits (65), Expect = 4.7
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 81 TVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNSCASIRLNPRPPDD-IE 139
TV N++ + + Q +D +L + L + ++ DS+SCA+ R P P D+ +
Sbjct: 235 TVRNVLDSLLYNQGTQLDDESLRTLLVEAEAIVNSRPLSADSDSCAADR-EPYPDDEVVS 293
Query: 140 PPAKLRKMNEVEEVDGETCPICLDSWGNSG 169
P+ ++ EV ET + SG
Sbjct: 294 RPSTALRLQATPEVLEETLRSAISQHARSG 323
>SB_26243| Best HMM Match : ACN9 (HMM E-Value=0.87)
Length = 344
Score = 30.3 bits (65), Expect = 4.7
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 228 QITALQKQVEILQSEKSR-TELELEKMKIAHRACVQQLEGLRSTLMKSQSNKEQ 280
Q++ L QVE Q EK R E LE+ KI QQLE + L SQS KE+
Sbjct: 118 QVSVLTDQVE-AQGEKMRDLEFTLEEQKIRAEDLEQQLE--KEKLRVSQSAKEK 168
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 30.3 bits (65), Expect = 4.7
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 229 ITALQKQVEILQSEKSR----TELELEKMKIAHRACVQQLEGLRSTLMKSQSNKEQPSRK 284
I LQK+ E++ E+ R E +LE++K+ R ++LE L+ +K + ++
Sbjct: 946 IAELQKEKEMVDEEQDRKVKDAEKDLEEVKLERRKHQEELETLKDKTLKVERELRDSQQE 1005
Query: 285 SWRFALEKN 293
+ + +E +
Sbjct: 1006 NIKMNIENS 1014
>SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05)
Length = 406
Score = 29.9 bits (64), Expect = 6.2
Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 154 DGETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGKANL 210
D CP+C++ + C H EC+E+ K ++ CP C+ ++ +
Sbjct: 18 DEGACPVCIEVFVEPKS----LPSCAHNVCRECLEKITKRNSIRFVECPICRARSEI 70
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 29.9 bits (64), Expect = 6.2
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
Query: 156 ETCPICLDSWGNSGDHRLVALRCGHLFGSECVERWLKAQKLKDRTCPTCKGKANLKDLRF 215
+ C IC + N+ D R+ CGHL C+E+W Q+ CP C ++ +KD++
Sbjct: 183 QLCKICAE---NNKDVRIEP--CGHLMCHLCLEQW---QEKGGDGCPFC--RSPIKDIQT 232
Query: 216 I 216
+
Sbjct: 233 V 233
>SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011)
Length = 434
Score = 29.9 bits (64), Expect = 6.2
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 228 QITALQKQVEILQSEKSRTELELEKMKIAHRACVQQLEGLRSTLMKSQSNKEQPSRKSWR 287
+I+ LQ Q+ +S+ S T+ EK++I + Q+L + T+ +KE+
Sbjct: 364 RISELQNQLAKNKSKLSETQERCEKLEIRYDEEKQRLSLVEDTIKTITQSKERVKMMVNN 423
Query: 288 FALEKNLE 295
FA NLE
Sbjct: 424 FAPNLNLE 431
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 29.9 bits (64), Expect = 6.2
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 221 LVAADTSQITALQKQVEILQS--EKSRTELE-LEKMKIAHRACVQQLE 265
+V+A +I L+ +V LQS E+ R E +EK+ + H VQQLE
Sbjct: 1214 MVSAKAERIKKLEAEVADLQSMVEQDRQRAERMEKLALEHEKKVQQLE 1261
>SB_10324| Best HMM Match : IFP_35_N (HMM E-Value=0.1)
Length = 798
Score = 29.5 bits (63), Expect = 8.2
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 50 PSEGPLDVPSDEPIQIDLAGPLRYDNDDSNDTVLNIIINGPGHLPAQSEDSNLTSPLTSF 109
P PL ++E +Q D G R + SN+T I++NG H +S + + SF
Sbjct: 98 PQHRPL---TEEELQQD--GNDRVFDTKSNETHKGILVNGVEHARKESLSGSSGTRKNSF 152
Query: 110 SDESTRQSINEDSNSCASIRLNPRPPDDIEPPAKLRKM 147
+D S DS C ++ + DD E A L K+
Sbjct: 153 ADPS---DSGVDSEGCDALSRHGDEADD-EDDALLTKV 186
>SB_1411| Best HMM Match : PT (HMM E-Value=0.079)
Length = 131
Score = 29.5 bits (63), Expect = 8.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 40 PSTSRSHDHDPSEGPLDVPSDEPIQIDLAGPLRYDNDD 77
PS + P GP+ PSD+PI GP+ + +DD
Sbjct: 4 PSAIQVTTFQPGFGPICQPSDDPIFQPGVGPICHPSDD 41
>SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08)
Length = 688
Score = 29.5 bits (63), Expect = 8.2
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 178 CGHLFGSECVERWLKAQKLKDRTCPTCKGK 207
C H+F +C+ W +++TCP C+ +
Sbjct: 499 CKHIFCEDCISLWFD----REQTCPMCRAR 524
>SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034)
Length = 671
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 180 HLFGSECVERWLKAQKLKDRTCPTCKGKAN 209
H+F S C++ WL+ +R CPTC+ N
Sbjct: 120 HVFCSPCLDLWLRT----NRYCPTCRTPIN 145
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.130 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,804,226
Number of Sequences: 59808
Number of extensions: 961114
Number of successful extensions: 2975
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 2905
Number of HSP's gapped (non-prelim): 117
length of query: 609
length of database: 16,821,457
effective HSP length: 86
effective length of query: 523
effective length of database: 11,677,969
effective search space: 6107577787
effective search space used: 6107577787
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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