Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001709-TA|BGIBMGA001709-PA|undefined
(622 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0066 + 25307863-25307871,25308431-25308570,25308712-253087... 36 0.073
12_02_0693 - 22207582-22207620,22208421-22208597,22209258-222093... 33 0.68
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 33 0.90
07_03_0800 + 21600050-21600106,21601506-21602663,21603029-21603520 32 1.6
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 31 2.7
01_03_0255 - 14281004-14281066,14281114-14281203,14281672-142817... 31 2.7
03_02_0375 + 7880543-7880872,7881291-7881365,7881445-7881531,788... 31 3.6
12_02_1047 + 25666113-25666442,25666606-25666651,25667042-256671... 30 4.8
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 30 4.8
02_05_1029 + 33614888-33615082,33615184-33615243,33615332-336154... 30 4.8
04_01_0451 + 5845249-5846133,5846220-5846509,5855590-5856060,585... 30 6.3
04_04_1404 + 33302080-33303341,33303435-33305307 29 8.4
02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715 29 8.4
>05_06_0066 +
25307863-25307871,25308431-25308570,25308712-25308754,
25308994-25310022
Length = 406
Score = 36.3 bits (80), Expect = 0.073
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 340 EAWSLEAERLAQDVCAQADLREALVAAGNDGEALSASVEALKAHCRKLEADNAVTQAALE 399
E + L+A+ +A D A DLR +L G + + L A + + A +EADNA E
Sbjct: 216 EVYELKAKLIAMDAEAD-DLRASLATKGMEIDELRAKLTSKDADIAAVEADNAELMKMAE 274
Query: 400 QATDVVHRLYTFC-----SVQES---WVVQLCAALRADERTVEAYD 437
+A+ V T +++ES ++ LRA ER EA +
Sbjct: 275 EASHAVKETATKARDTEHALRESAAREAARVAERLRASERAREALE 320
>12_02_0693 -
22207582-22207620,22208421-22208597,22209258-22209347,
22210215-22210280,22210473-22210570,22210669-22210789,
22210875-22212477,22213332-22213915
Length = 925
Score = 33.1 bits (72), Expect = 0.68
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 290 RAARQPRSAGDSCERQRGSPASRGRSETRRAKLASRVRLRTA--DSRDPSTDEAWSLEAE 347
RAARQ R+R + +R ++E + A R ++ A ++R+ + +A AE
Sbjct: 561 RAARQAVERATKEARERAAAEARAKAEREARQRAERAAVQRAQKEARERAAVDARE-RAE 619
Query: 348 RLAQDV--CAQADLREALVAAGNDGEALS-ASVEALKAHCRKLEADNAVTQAALE 399
R A + A A+ +E + D A A+VE + R+ AV +AA E
Sbjct: 620 RAAAEAKERAAAEAKEKVATQARDRAAAERAAVERAQQEARRRAERAAVERAASE 674
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 32.7 bits (71), Expect = 0.90
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 317 TRRAKLASRVRLRTADSRDPSTDEAWSLEAERLAQDVCAQADLREALVAAGNDGEALSAS 376
+RR + + R A S ++ +A EAERL D A+A + A AG A +A
Sbjct: 431 SRRGRAVTCAAARGAASSSSASFDAAGFEAERLRLDAEARAGMASAAAVAG----AEAAD 486
Query: 377 VEALKAHCRKLEADNAVTQAALEQATDVVHRLYTF 411
+A K RK D + V HR+ F
Sbjct: 487 PKAWKWAIRKRVWDALEAEGVARDPRPVHHRIPNF 521
>07_03_0800 + 21600050-21600106,21601506-21602663,21603029-21603520
Length = 568
Score = 31.9 bits (69), Expect = 1.6
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 545 AALRDCRPALYSQHDRYFQQESAQLKERVDSSRLCEG 581
AA RDC ALY D YFQ + +E + R+C+G
Sbjct: 387 AAARDCHDALYRAIDVYFQVHTRLTEE--EKMRICKG 421
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 31.1 bits (67), Expect = 2.7
Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 284 TTARCCRAARQPRSAGDSCERQRGSPASRGRSETRRAKLASRVRLRTADSRDPSTDEAWS 343
TT R A +P+ + C S + GRS R A R LR + S D E S
Sbjct: 50 TTTAARRLAPKPQPQANRCRPSSVSVVAAGRSRRRSA----RSSLRASASLDQEVKERAS 105
Query: 344 LEAERLAQDVCAQADLREALVAAGNDGEALSASVEALKAHCRKLEADNAVTQAALEQATD 403
A + Q + D+R + A D + V+++ K+ DN V Q + + D
Sbjct: 106 PAAGKSGQ--ATRRDVRNIAIVAHVD-HGKTTLVDSMLRQA-KVFRDNQVVQERIMDSND 161
Query: 404 V 404
+
Sbjct: 162 L 162
>01_03_0255 -
14281004-14281066,14281114-14281203,14281672-14281737,
14281837-14281907,14282021-14282153,14282245-14283898,
14285346-14285935
Length = 888
Score = 31.1 bits (67), Expect = 2.7
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 290 RAARQPRSAGDSCERQRGSPASRGRSETR-RAKLASRVRLRTADSRDPSTDEAWSLEAER 348
RAA + R + RQR A+ ++ R + A+ R R A + + + ER
Sbjct: 582 RAAAEARMQAEREARQRAERAAVQKAAAEARERAAAEARERAAKAAAEAKERVAEEARER 641
Query: 349 LAQDVCAQADLREALVAAGNDGEALSASVEALKAHCRKL--EADNAVTQAALEQA 401
A+ A A+ RE + A A +A +A K+ EA +AA+E+A
Sbjct: 642 AAK---AAAEARERAATEAREKAAAEARAKAERAAVDKVAAEARRRAERAAVERA 693
Score = 31.1 bits (67), Expect = 2.7
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 275 SERDSELCLTTARCCRAARQPRSAGDSCERQRGSPASRGRSETRRAKLASRVRLRTADSR 334
+ER++ A +AA + R + R+R + A+ E + R A++R
Sbjct: 591 AEREARQRAERAAVQKAAAEARERAAAEARERAAKAAAEAKERVAEEARERAAKAAAEAR 650
Query: 335 DPSTDEAWSLEAERLAQDVCAQADLREAL--VAAGNDGEALSASVEALKAHCRKLEADNA 392
+ + EA E+ A + A+A+ R A+ VAA A A+VE A R+ A+ A
Sbjct: 651 ERAATEA----REKAAAEARAKAE-RAAVDKVAAEARRRAERAAVERAAAEARQRAANEA 705
Query: 393 VTQAALE 399
+A E
Sbjct: 706 RKRAEAE 712
>03_02_0375 +
7880543-7880872,7881291-7881365,7881445-7881531,
7881619-7881723,7881806-7881876,7882552-7882840
Length = 318
Score = 30.7 bits (66), Expect = 3.6
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 14 VTKTSSKYRIKIRTVDGTRSQGGELSRSTAYYYGDLEKLKRQKPLEDVPEQRQE 67
VTKTS +IK ++ + + + A GD EK+K++K + D+P Q+ +
Sbjct: 145 VTKTSKVKKIKDEDLEIDTKK---IKKGAATRKGDAEKVKKEKKVYDLPGQKHD 195
>12_02_1047 +
25666113-25666442,25666606-25666651,25667042-25667130,
25667291-25667493,25667807-25667949,25668286-25668332,
25668794-25668870,25668952-25668981,25669068-25669163,
25669489-25669591,25669959-25670041,25670204-25670326,
25670465-25670576,25670791-25670898,25671006-25671593
Length = 725
Score = 30.3 bits (65), Expect = 4.8
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 330 TADSRDPSTDEAWSLEAERLAQDVCAQADLREALVAAGNDG------EALSASVEALKAH 383
T+D D D S E+E+ A E +V G+ G + ++AS EA +
Sbjct: 570 TSDRSDNEEDATKSAESEQAAAAAAPGNGSSEMIVEGGDTGISNEDIKGVAASKEASSSI 629
Query: 384 CRKLEADNAVTQAALEQAT 402
CR ADN LE+AT
Sbjct: 630 CR--SADNLAGCVLLEEAT 646
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 30.3 bits (65), Expect = 4.8
Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 329 RTADSRDPSTDEAWSLEAERLAQDVCAQADLREALVAAGNDGEALSASVEALKAHCRKLE 388
R AD + EA + +++ + Q+ EA A+ + + L + ++++ + E
Sbjct: 142 RAADEANAKLQEALAAQSKAAEESAAEQSGDAEAEQASASMEDELRTKLASMQS---QQE 198
Query: 389 ADNAVTQAALEQATDVVHRLYTFCSVQESWVVQLCAALRADERTVE 434
AD A ++ +EQ + L + + + Q A+RA + E
Sbjct: 199 ADMAALRSTVEQLEQARYELADAIDAKNAALTQADDAMRASDENAE 244
>02_05_1029 +
33614888-33615082,33615184-33615243,33615332-33615403,
33615484-33615659,33615749-33615909,33616122-33616180,
33616269-33616315,33616449-33616589,33616838-33616929,
33616977-33616984
Length = 336
Score = 30.3 bits (65), Expect = 4.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 156 YLCCPNVGDEEISRESSWRYSSLRPVTAAP 185
YLC P + I+RE WRY + PV P
Sbjct: 291 YLCLPLMSIMSIAREFGWRYLNQSPVCIDP 320
>04_01_0451 +
5845249-5846133,5846220-5846509,5855590-5856060,
5856898-5857063,5857100-5857498,5858031-5858075
Length = 751
Score = 29.9 bits (64), Expect = 6.3
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 363 LVAAGNDGEALSASVEALKAHCRKLEADNAVTQAALEQATDVVHRLYTFCSVQESWVVQL 422
+V +D EAL E ++ HCRK+E ++ + C V + W +
Sbjct: 596 VVGLKDDNEAL----EGVECHCRKMECEDIPCSDIFVVLKFLGFDTIPRCCVVDRWTMGA 651
Query: 423 CAALRADERT 432
AA R+D T
Sbjct: 652 KAAFRSDRNT 661
>04_04_1404 + 33302080-33303341,33303435-33305307
Length = 1044
Score = 29.5 bits (63), Expect = 8.4
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 303 ERQRGSPASRGRSETRRAKLASRVRLRTADSRDPSTDEAWSLEAERLAQDVCAQADLREA 362
ER+R S R A+ A+R R + + + +EA AE A++ A+A +A
Sbjct: 446 ERRRESDRREAADRLREAEEAAREAARIRQAEEAAREEA--ARAEEAAKEEAARARQAKA 503
Query: 363 LVAAG 367
AAG
Sbjct: 504 TAAAG 508
>02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715
Length = 1536
Score = 29.5 bits (63), Expect = 8.4
Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 4/104 (3%)
Query: 253 CNPTIEVTSSQQVTDCDTSLNLSER-DSELCLTTARCCRAARQPRSAGDSCERQRGSPAS 311
C+P + ++ SLN S+ SE T AR +A R GS +S
Sbjct: 468 CSPELHTVKEEKSCSSSQSLNNSQSCSSEHAKTIGSSKEDARSSTAASGIAGRTSGS-SS 526
Query: 312 RGRSETRRAKLASRVRLRTADSRDPSTDEAWSLEAERLAQDVCA 355
R T L+S + +R S D SL E+ +Q V A
Sbjct: 527 RVHRRTNNGILSSGGQKEATVARSTSLDR--SLLPEKASQSVTA 568
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.127 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,599,235
Number of Sequences: 37544
Number of extensions: 516467
Number of successful extensions: 1318
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1311
Number of HSP's gapped (non-prelim): 21
length of query: 622
length of database: 14,793,348
effective HSP length: 86
effective length of query: 536
effective length of database: 11,564,564
effective search space: 6198606304
effective search space used: 6198606304
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 63 (29.5 bits)
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