Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001709-TA|BGIBMGA001709-PA|undefined
(622 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL121586-4|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 34 1.7
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 34 1.7
AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome assoc... 34 1.7
M62397-1|AAA52069.1| 829|Homo sapiens colorectal mutant cancer ... 33 2.3
BX537952-1|CAD97919.1| 829|Homo sapiens hypothetical protein pr... 33 2.3
BC018919-1|AAH18919.1| 829|Homo sapiens mutated in colorectal c... 33 2.3
BC009279-1|AAH09279.1| 829|Homo sapiens mutated in colorectal c... 33 2.3
AK128596-1|BAC87521.1| 973|Homo sapiens protein ( Homo sapiens ... 33 2.3
S75433-1|AAB32519.2| 729|Homo sapiens interferon-inducible myel... 33 3.0
M63838-1|AAA58683.1| 729|Homo sapiens interferon-gamma induced ... 33 3.0
AL359753-11|CAI15085.1| 729|Homo sapiens interferon, gamma-indu... 33 3.0
AL359753-10|CAI15083.1| 414|Homo sapiens interferon, gamma-indu... 33 3.0
AL359753-9|CAI15084.1| 729|Homo sapiens interferon, gamma-induc... 33 3.0
AF208043-1|AAF20997.1| 682|Homo sapiens IFI16b protein. 33 3.0
AB208989-1|BAD92226.1| 736|Homo sapiens Interferon, gamma-induc... 33 3.0
BC017059-1|AAH17059.1| 729|Homo sapiens interferon, gamma-induc... 33 4.0
AY138863-1|AAM96005.1| 729|Homo sapiens interferon-inducible IF... 33 4.0
AK094968-1|BAC04462.1| 418|Homo sapiens protein ( Homo sapiens ... 33 4.0
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 33 4.0
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 32 5.3
BC009410-1|AAH09410.1| 546|Homo sapiens chromatin licensing and... 32 5.3
BC008860-1|AAH08860.2| 528|Homo sapiens CDT1 protein protein. 32 5.3
BC000137-1|AAH00137.2| 546|Homo sapiens chromatin licensing and... 32 5.3
AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein. 32 5.3
AK123337-1|BAC85584.1| 121|Homo sapiens protein ( Homo sapiens ... 32 5.3
AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain pr... 32 5.3
AF321125-1|AAG45181.1| 546|Homo sapiens DNA replication factor ... 32 5.3
AB053172-1|BAB61878.1| 546|Homo sapiens Cdt1 protein. 32 5.3
AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein. 32 5.3
AL359753-12|CAI15086.1| 493|Homo sapiens interferon, gamma-indu... 31 9.2
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 31 9.2
>AL121586-4|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 33.9 bits (74), Expect = 1.7
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 311 SRGRSETRRAKLASRVRLRTADSRDPSTDEAWSLEAERLAQDVCAQADLREALVAAGNDG 370
+R + E R K + + L + R EA S+ + L+ LR+ + A +
Sbjct: 1044 NRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSA-------LRQDMQEAQGEQ 1096
Query: 371 EALSASVEALKAHCRKLEADNAVTQAALEQATDVVH----RLYTFCSVQESWVVQLCAAL 426
+ LSA +E L+ ++ EAD +A L + + H +L QE+ QL L
Sbjct: 1097 KELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRL 1156
Query: 427 RADERTVEA 435
R+ E +EA
Sbjct: 1157 RSTESQLEA 1165
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
protein 1 protein.
Length = 2442
Score = 33.9 bits (74), Expect = 1.7
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 311 SRGRSETRRAKLASRVRLRTADSRDPSTDEAWSLEAERLAQDVCAQADLREALVAAGNDG 370
+R + E R K + + L + R EA S+ + L+ LR+ + A +
Sbjct: 1044 NRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSA-------LRQDMQEAQGEQ 1096
Query: 371 EALSASVEALKAHCRKLEADNAVTQAALEQATDVVH----RLYTFCSVQESWVVQLCAAL 426
+ LSA +E L+ ++ EAD +A L + + H +L QE+ QL L
Sbjct: 1097 KELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRL 1156
Query: 427 RADERTVEA 435
R+ E +EA
Sbjct: 1157 RSTESQLEA 1165
>AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome associated
protein protein.
Length = 2442
Score = 33.9 bits (74), Expect = 1.7
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 311 SRGRSETRRAKLASRVRLRTADSRDPSTDEAWSLEAERLAQDVCAQADLREALVAAGNDG 370
+R + E R K + + L + R EA S+ + L+ LR+ + A +
Sbjct: 1044 NRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSA-------LRQDMQEAQGEQ 1096
Query: 371 EALSASVEALKAHCRKLEADNAVTQAALEQATDVVH----RLYTFCSVQESWVVQLCAAL 426
+ LSA +E L+ ++ EAD +A L + + H +L QE+ QL L
Sbjct: 1097 KELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLHLRL 1156
Query: 427 RADERTVEA 435
R+ E +EA
Sbjct: 1157 RSTESQLEA 1165
>M62397-1|AAA52069.1| 829|Homo sapiens colorectal mutant cancer
protein protein.
Length = 829
Score = 33.5 bits (73), Expect = 2.3
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 19/138 (13%)
Query: 320 AKLASRVRLRTADSRDPSTDE-----------AWSLEAERLAQDVCAQADLREALVAAGN 368
AK+A RV+L S S+D S AE LA + ++++E +
Sbjct: 324 AKIAERVKLSKTRSESSSSDRPVLGSEISSIGVSSSVAEHLAHSLQDCSNIQEIFQTLYS 383
Query: 369 DGEALSAS--------VEALKAHCRKLEADNAVTQAALEQATDVVHRLYTFCSVQESWVV 420
G A+S S E L + L++ N + LE+ R+ ES
Sbjct: 384 HGSAISESKIREFEVETERLNSRIEHLKSQNDLLTITLEECKSNAERMSMLVGKYESNAT 443
Query: 421 QLCAALRADERTVEAYDV 438
L AL+ E+ +EAY++
Sbjct: 444 ALRLALQYSEQCIEAYEL 461
>BX537952-1|CAD97919.1| 829|Homo sapiens hypothetical protein
protein.
Length = 829
Score = 33.5 bits (73), Expect = 2.3
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 19/138 (13%)
Query: 320 AKLASRVRLRTADSRDPSTDE-----------AWSLEAERLAQDVCAQADLREALVAAGN 368
AK+A RV+L S S+D S AE LA + ++++E +
Sbjct: 324 AKIAERVKLSKTRSESSSSDRPVLGSEISSIGVSSSVAEHLAHSLQDCSNIQEIFQTLYS 383
Query: 369 DGEALSAS--------VEALKAHCRKLEADNAVTQAALEQATDVVHRLYTFCSVQESWVV 420
G A+S S E L + L++ N + LE+ R+ ES
Sbjct: 384 HGSAISESKIREFEVETERLNSRIEHLKSQNDLLTITLEECKSNAERMSMLVGKYESNAT 443
Query: 421 QLCAALRADERTVEAYDV 438
L AL+ E+ +EAY++
Sbjct: 444 ALRLALQYSEQCIEAYEL 461
>BC018919-1|AAH18919.1| 829|Homo sapiens mutated in colorectal
cancers protein.
Length = 829
Score = 33.5 bits (73), Expect = 2.3
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 19/138 (13%)
Query: 320 AKLASRVRLRTADSRDPSTDE-----------AWSLEAERLAQDVCAQADLREALVAAGN 368
AK+A RV+L S S+D S AE LA + ++++E +
Sbjct: 324 AKIAERVKLSKTRSESSSSDRPVLGSEISSIGVSSSVAEHLAHSLQDCSNIQEIFQTLYS 383
Query: 369 DGEALSAS--------VEALKAHCRKLEADNAVTQAALEQATDVVHRLYTFCSVQESWVV 420
G A+S S E L + L++ N + LE+ R+ ES
Sbjct: 384 HGSAISESKIREFEVETERLNSRIEHLKSQNDLLTITLEECKSNAERMSMLVGKYESNAT 443
Query: 421 QLCAALRADERTVEAYDV 438
L AL+ E+ +EAY++
Sbjct: 444 ALRLALQYSEQCIEAYEL 461
>BC009279-1|AAH09279.1| 829|Homo sapiens mutated in colorectal
cancers protein.
Length = 829
Score = 33.5 bits (73), Expect = 2.3
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 19/138 (13%)
Query: 320 AKLASRVRLRTADSRDPSTDE-----------AWSLEAERLAQDVCAQADLREALVAAGN 368
AK+A RV+L S S+D S AE LA + ++++E +
Sbjct: 324 AKIAERVKLSKTRSESSSSDRPVLGSEISSIGVSSSVAEHLAHSLQDCSNIQEIFQTLYS 383
Query: 369 DGEALSAS--------VEALKAHCRKLEADNAVTQAALEQATDVVHRLYTFCSVQESWVV 420
G A+S S E L + L++ N + LE+ R+ ES
Sbjct: 384 HGSAISESKIREFEVETERLNSRIEHLKSQNDLLTITLEECKSNAERMSMLVGKYESNAT 443
Query: 421 QLCAALRADERTVEAYDV 438
L AL+ E+ +EAY++
Sbjct: 444 ALRLALQYSEQCIEAYEL 461
>AK128596-1|BAC87521.1| 973|Homo sapiens protein ( Homo sapiens
cDNA FLJ46755 fis, clone TRACH3023373, highly similar
to Colorectal mutant cancer protein. ).
Length = 973
Score = 33.5 bits (73), Expect = 2.3
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 19/138 (13%)
Query: 320 AKLASRVRLRTADSRDPSTDE-----------AWSLEAERLAQDVCAQADLREALVAAGN 368
AK+A RV+L S S+D S AE LA + ++++E +
Sbjct: 518 AKIAERVKLSKTRSESSSSDRPVLGSEISGIGVSSSVAEHLAHSLQDCSNIQEIFQTLYS 577
Query: 369 DGEALSAS--------VEALKAHCRKLEADNAVTQAALEQATDVVHRLYTFCSVQESWVV 420
G A+S S E L + L++ N + LE+ R+ ES
Sbjct: 578 HGSAISESKIREFEVETERLNSRIEHLKSQNDLLTITLEECKSNAERMSMLVGKYESNAT 637
Query: 421 QLCAALRADERTVEAYDV 438
L AL+ E+ +EAY++
Sbjct: 638 ALRLALQYSEQCIEAYEL 655
>S75433-1|AAB32519.2| 729|Homo sapiens interferon-inducible myeloid
differentiation transcriptional activator protein.
Length = 729
Score = 33.1 bits (72), Expect = 3.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 41 STAYYYGDLEKLKRQKPLEDVPEQRQETSEICEIVPQRNVME-APRLVEVGRQWSLPEYT 99
STA K P + +T C++ P+RNV++ P +V+V EY
Sbjct: 160 STAMGRSPSPKTSLSAPPNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYE 219
Query: 100 TPESSRKI 107
TPE +KI
Sbjct: 220 TPEMEKKI 227
>M63838-1|AAA58683.1| 729|Homo sapiens interferon-gamma induced
protein protein.
Length = 729
Score = 33.1 bits (72), Expect = 3.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 41 STAYYYGDLEKLKRQKPLEDVPEQRQETSEICEIVPQRNVME-APRLVEVGRQWSLPEYT 99
STA K P + +T C++ P+RNV++ P +V+V EY
Sbjct: 160 STAMGRSPSPKTSLSAPPNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYE 219
Query: 100 TPESSRKI 107
TPE +KI
Sbjct: 220 TPEMEKKI 227
>AL359753-11|CAI15085.1| 729|Homo sapiens interferon,
gamma-inducible protein 16 protein.
Length = 729
Score = 33.1 bits (72), Expect = 3.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 41 STAYYYGDLEKLKRQKPLEDVPEQRQETSEICEIVPQRNVME-APRLVEVGRQWSLPEYT 99
STA K P + +T C++ P+RNV++ P +V+V EY
Sbjct: 160 STAMGRSPSPKTSLSAPPNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYE 219
Query: 100 TPESSRKI 107
TPE +KI
Sbjct: 220 TPEMEKKI 227
>AL359753-10|CAI15083.1| 414|Homo sapiens interferon,
gamma-inducible protein 16 protein.
Length = 414
Score = 33.1 bits (72), Expect = 3.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 41 STAYYYGDLEKLKRQKPLEDVPEQRQETSEICEIVPQRNVME-APRLVEVGRQWSLPEYT 99
STA K P + +T C++ P+RNV++ P +V+V EY
Sbjct: 160 STAMGRSPSPKTSLSAPPNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYE 219
Query: 100 TPESSRKI 107
TPE +KI
Sbjct: 220 TPEMEKKI 227
>AL359753-9|CAI15084.1| 729|Homo sapiens interferon,
gamma-inducible protein 16 protein.
Length = 729
Score = 33.1 bits (72), Expect = 3.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 41 STAYYYGDLEKLKRQKPLEDVPEQRQETSEICEIVPQRNVME-APRLVEVGRQWSLPEYT 99
STA K P + +T C++ P+RNV++ P +V+V EY
Sbjct: 160 STAMGRSPSPKTSLSAPPNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYE 219
Query: 100 TPESSRKI 107
TPE +KI
Sbjct: 220 TPEMEKKI 227
>AF208043-1|AAF20997.1| 682|Homo sapiens IFI16b protein.
Length = 682
Score = 33.1 bits (72), Expect = 3.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 41 STAYYYGDLEKLKRQKPLEDVPEQRQETSEICEIVPQRNVME-APRLVEVGRQWSLPEYT 99
STA K P + +T C++ P+RNV++ P +V+V EY
Sbjct: 160 STAMGRSPSPKTSLSAPPNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYE 219
Query: 100 TPESSRKI 107
TPE +KI
Sbjct: 220 TPEMEKKI 227
>AB208989-1|BAD92226.1| 736|Homo sapiens Interferon,
gamma-inducible protein 16 variant protein.
Length = 736
Score = 33.1 bits (72), Expect = 3.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 41 STAYYYGDLEKLKRQKPLEDVPEQRQETSEICEIVPQRNVME-APRLVEVGRQWSLPEYT 99
STA K P + +T C++ P+RNV++ P +V+V EY
Sbjct: 167 STAMGRSPSPKTSLSAPPNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYE 226
Query: 100 TPESSRKI 107
TPE +KI
Sbjct: 227 TPEMEKKI 234
>BC017059-1|AAH17059.1| 729|Homo sapiens interferon,
gamma-inducible protein 16 protein.
Length = 729
Score = 32.7 bits (71), Expect = 4.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 41 STAYYYGDLEKLKRQKPLEDVPEQRQETSEICEIVPQRNVME-APRLVEVGRQWSLPEYT 99
STA K P + +T C++ P+RNV++ P +V+V EY
Sbjct: 160 STAMGRSPSPKTSLSAPPNTSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYE 219
Query: 100 TPESSRKI 107
TPE +KI
Sbjct: 220 TPEMEKKI 227
>AY138863-1|AAM96005.1| 729|Homo sapiens interferon-inducible IFI
16 protein.
Length = 729
Score = 32.7 bits (71), Expect = 4.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 41 STAYYYGDLEKLKRQKPLEDVPEQRQETSEICEIVPQRNVME-APRLVEVGRQWSLPEYT 99
STA K P + +T C++ P+RNV++ P +V+V EY
Sbjct: 160 STAMGRSPSPKTSLSAPPNTSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYE 219
Query: 100 TPESSRKI 107
TPE +KI
Sbjct: 220 TPEMEKKI 227
>AK094968-1|BAC04462.1| 418|Homo sapiens protein ( Homo sapiens
cDNA FLJ37649 fis, clone BRHIP2000534, moderately
similar to GAMMA-INTERFERON-INDUCIBLE PROTEIN IFI-16. ).
Length = 418
Score = 32.7 bits (71), Expect = 4.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 41 STAYYYGDLEKLKRQKPLEDVPEQRQETSEICEIVPQRNVME-APRLVEVGRQWSLPEYT 99
STA K P + +T C++ P+RNV++ P +V+V EY
Sbjct: 164 STAMGRSPSPKTSLSAPPNTSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYE 223
Query: 100 TPESSRKI 107
TPE +KI
Sbjct: 224 TPEMEKKI 231
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 32.7 bits (71), Expect = 4.0
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 280 ELCLTTARCC---RAARQPRSAGDSCERQRGSPASRGRSETRRAKLASRVRLR---TADS 333
EL + ARC R +R PR S R R SR RS R+K SR R R T+ S
Sbjct: 84 ELRVQMARCGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 143
Query: 334 RDPSTDEAWSLEAER 348
R ++ S R
Sbjct: 144 RSARRSKSKSSSVSR 158
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 32.3 bits (70), Expect = 5.3
Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 3/171 (1%)
Query: 168 SRESSWRYSSLRPVTAAPIPGQNDECESTTQPAEELDNDADPSRTEQNDTSSLASPAELX 227
S S +SS P ++ + +++ + + + PS + + +SS +SP+
Sbjct: 62 SSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSS 121
Query: 228 XXXXXXXXXXXXXXXXXXXXXHSRPCNPTIEVTSSQQVTDCDTSLNLSERDSELCLTTAR 287
S P + + +SS + +S S S + +
Sbjct: 122 SSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSS---SPSSSSPSSSGSS 178
Query: 288 CCRAARQPRSAGDSCERQRGSPASRGRSETRRAKLASRVRLRTADSRDPST 338
+ P S+ S SP+ R S + + S + S PS+
Sbjct: 179 PSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSS 229
>BC009410-1|AAH09410.1| 546|Homo sapiens chromatin licensing and
DNA replication factor 1 protein.
Length = 546
Score = 32.3 bits (70), Expect = 5.3
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 282 CLTTARCCRAARQPRSAGDSCERQRGSPASRGRSETRRAKLASRVRLRTADSRDPSTDEA 341
C T + A R P SA ++ PA+ GR + R R+RL + PST EA
Sbjct: 27 CRTPSPARPALRAPASATSGSRKRARPPAAPGRDQAR-PPARRRLRLSVDEVSSPSTPEA 85
Query: 342 WSLEA 346
+ A
Sbjct: 86 PDIPA 90
>BC008860-1|AAH08860.2| 528|Homo sapiens CDT1 protein protein.
Length = 528
Score = 32.3 bits (70), Expect = 5.3
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 282 CLTTARCCRAARQPRSAGDSCERQRGSPASRGRSETRRAKLASRVRLRTADSRDPSTDEA 341
C T + A R P SA ++ PA+ GR + R R+RL + PST EA
Sbjct: 9 CRTPSPARPALRAPASATSGSRKRARPPAAPGRDQAR-PPARRRLRLSVDEVSSPSTPEA 67
Query: 342 WSLEA 346
+ A
Sbjct: 68 PDIPA 72
>BC000137-1|AAH00137.2| 546|Homo sapiens chromatin licensing and
DNA replication factor 1 protein.
Length = 546
Score = 32.3 bits (70), Expect = 5.3
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 282 CLTTARCCRAARQPRSAGDSCERQRGSPASRGRSETRRAKLASRVRLRTADSRDPSTDEA 341
C T + A R P SA ++ PA+ GR + R R+RL + PST EA
Sbjct: 27 CRTPSPARPALRAPASATSGSRKRARPPAAPGRDQAR-PPARRRLRLSVDEVSSPSTPEA 85
Query: 342 WSLEA 346
+ A
Sbjct: 86 PDIPA 90
>AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.
Length = 3690
Score = 32.3 bits (70), Expect = 5.3
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 304 RQRGSPASRGRSETRRA-KLASRVRLRTADSRDPSTDEAWSLEAERLAQDVCAQADLREA 362
R G+P + +E A +L +RV+ + + + + A +RLAQ DLREA
Sbjct: 2329 RDLGAPQAAAEAELAAAQRLLARVQEQLSSLWEENQALATQTR-DRLAQHEAGLMDLREA 2387
Query: 363 L---VAAGNDGEALSA----SVEALKAHCRKLEADNAVTQAALEQATDVVHRLY 409
L V A + + L++ +E ++L DNA QA L A D + ++
Sbjct: 2388 LNRAVDATREAQELNSRNQERLEEALQRKQELSRDNATLQATLHAARDTLASVF 2441
>AK123337-1|BAC85584.1| 121|Homo sapiens protein ( Homo sapiens
cDNA FLJ41343 fis, clone BRAWH2001973. ).
Length = 121
Score = 32.3 bits (70), Expect = 5.3
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 309 PASRGRSETRRAKLASRVRLRTADSR-DPSTDEAWSLEAERLAQDVCAQADLREALVAAG 367
PA+ GR + A L LR A+SR +P+ ++ LE E+L V + DL + + +
Sbjct: 10 PAAAGRGAVQEAGLGMSTGLRLAESRVEPALEKQAQLE-EQLRDKVLHEKDLSQQQMQSD 68
Query: 368 NDGEALSA 375
D LSA
Sbjct: 69 LDKADLSA 76
>AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain
precursor protein.
Length = 3695
Score = 32.3 bits (70), Expect = 5.3
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 304 RQRGSPASRGRSETRRA-KLASRVRLRTADSRDPSTDEAWSLEAERLAQDVCAQADLREA 362
R G+P + +E A +L +RV+ + + + + A +RLAQ DLREA
Sbjct: 2329 RDLGAPQAAAEAELAAAQRLLARVQEQLSSLWEENQALATQTR-DRLAQHEAGLMDLREA 2387
Query: 363 L---VAAGNDGEALSA----SVEALKAHCRKLEADNAVTQAALEQATDVVHRLY 409
L V A + + L++ +E ++L DNA QA L A D + ++
Sbjct: 2388 LNRAVDATREAQELNSRNQERLEEALQRKQELSRDNATLQATLHAARDTLASVF 2441
>AF321125-1|AAG45181.1| 546|Homo sapiens DNA replication factor
protein.
Length = 546
Score = 32.3 bits (70), Expect = 5.3
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 282 CLTTARCCRAARQPRSAGDSCERQRGSPASRGRSETRRAKLASRVRLRTADSRDPSTDEA 341
C T + A R P SA ++ PA+ GR + R R+RL + PST EA
Sbjct: 27 CRTPSPARPALRAPASATSGSRKRARPPAAPGRDQAR-PPARRRLRLSVDEVSSPSTPEA 85
Query: 342 WSLEA 346
+ A
Sbjct: 86 PDIPA 90
>AB053172-1|BAB61878.1| 546|Homo sapiens Cdt1 protein.
Length = 546
Score = 32.3 bits (70), Expect = 5.3
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 282 CLTTARCCRAARQPRSAGDSCERQRGSPASRGRSETRRAKLASRVRLRTADSRDPSTDEA 341
C T + A R P SA ++ PA+ GR + R R+RL + PST EA
Sbjct: 27 CRTPSPARPALRAPASATSGSRKRARPPAAPGRDQAR-PPARRRLRLSVDEVSSPSTPEA 85
Query: 342 WSLEA 346
+ A
Sbjct: 86 PDIPA 90
>AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein.
Length = 1645
Score = 32.3 bits (70), Expect = 5.3
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 304 RQRGSPASRGRSETRRA-KLASRVRLRTADSRDPSTDEAWSLEAERLAQDVCAQADLREA 362
R G+P + +E A +L +RV+ + + + + A +RLAQ DLREA
Sbjct: 279 RDLGAPQAAAEAELAAAQRLLARVQEQLSSLWEENQALATQTR-DRLAQHEAGLMDLREA 337
Query: 363 L---VAAGNDGEALSA----SVEALKAHCRKLEADNAVTQAALEQATDVVHRLY 409
L V A + + L++ +E ++L DNA QA L A D + ++
Sbjct: 338 LNRAVDATREAQELNSRNQERLEEALQRKQELSRDNATLQATLHAARDTLASVF 391
>AL359753-12|CAI15086.1| 493|Homo sapiens interferon,
gamma-inducible protein 16 protein.
Length = 493
Score = 31.5 bits (68), Expect = 9.2
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 64 QRQETSEICEIVPQRNVME-APRLVEVGRQWSLPEYTTPESSRKI 107
+ +T C++ P+RNV++ P +V+V EY TPE +KI
Sbjct: 3 ENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKI 47
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 31.5 bits (68), Expect = 9.2
Identities = 32/179 (17%), Positives = 59/179 (32%), Gaps = 4/179 (2%)
Query: 160 PNVGDEEISRESSWRYSSLRPVTAAPIPGQNDECESTTQPAEELDNDADPSRTEQNDTSS 219
P+ S SS SS ++ P + S + + + + PS + + +SS
Sbjct: 56 PSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSS-SSSSSPSSSNSSSSSS 114
Query: 220 LASPAELXXXXXXXXXXXXXXXXXXXXXXHSRPCNPTIEVTSSQQVTDCDTSLNLSERDS 279
+SP+ S P + + +SS + +S S S
Sbjct: 115 SSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPS 174
Query: 280 ELCLTTARCCRAARQPRSAGDSCERQRGSPASRGRSETRRAKLASRVRLRTADSRDPST 338
+ + + P S+ S SP+ R S + + S + S PS+
Sbjct: 175 S---SGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSS 230
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.314 0.127 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,963,769
Number of Sequences: 224733
Number of extensions: 2503770
Number of successful extensions: 6024
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 6009
Number of HSP's gapped (non-prelim): 39
length of query: 622
length of database: 73,234,838
effective HSP length: 94
effective length of query: 528
effective length of database: 52,109,936
effective search space: 27514046208
effective search space used: 27514046208
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 68 (31.5 bits)
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