Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001707-TA|BGIBMGA001707-PA|IPR002453|Beta tubulin,
IPR000217|Tubulin, IPR013838|Beta tubulin, autoregulation binding
site, IPR003008|Tubulin/FtsZ, GTPase, IPR008280|Tubulin/FtsZ,
C-terminal
(409 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 512 e-146
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 283 3e-77
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 280 3e-76
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 202 5e-53
SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr 2|||M... 28 2.7
SPBC2G2.17c |||beta-glucosidase Psu2 |Schizosaccharomyces pombe|... 27 3.6
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 6.3
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 27 6.3
SPAC3F10.02c |trk1|sptrk|potassium ion transporter Trk1|Schizosa... 27 6.3
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 26 8.4
SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4 |Schi... 26 8.4
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 512 bits (1263), Expect = e-146
Identities = 235/336 (69%), Positives = 276/336 (82%)
Query: 49 VYYNEADDGNNWAKGHYTEGAELVESVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXX 108
+ Y ++ GN WAKGHYTEGAEL ++VLDVVR+EAE CD LQGFQ
Sbjct: 90 IIYGQSGAGNIWAKGHYTEGAELADAVLDVVRREAEACDALQGFQLTHSLGGGTGSGMGT 149
Query: 109 XXXXKLREEYPDRIVNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYD 168
K+REEYPDR++ TFSV P+PK SDTVVEPYNATLS+HQLVEN+DETFCIDNEAL
Sbjct: 150 LLLSKIREEYPDRMMATFSVAPAPKSSDTVVEPYNATLSMHQLVENSDETFCIDNEALSS 209
Query: 169 ICFRTLRLASPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPG 228
I TL++ SP+Y DLNHLVS M+GVTT RFPG+LN+DLRKLAVNMVPFPRLHFFM G
Sbjct: 210 IFANTLKIKSPSYDDLNHLVSAVMAGVTTSFRFPGELNSDLRKLAVNMVPFPRLHFFMVG 269
Query: 229 FAPLTARNSQVYRALTVPELSQQLFSPVNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQ 288
FAPL A S ++A++VPEL+QQ+F NMM A DPRHGRYLTVAA+FRG++SMKEVDEQ
Sbjct: 270 FAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQ 329
Query: 289 MLAVQDKNSSYFVEWIPNNVKVAVCDVPPRGVKMAATFVGNTTAIQEIFKRISEQFTLMF 348
+ +VQ KNS+YFVEWIP+NV AVC VPP+ +KM+ATF+GN+T+IQEIF+R+ +QF+ MF
Sbjct: 330 IRSVQTKNSAYFVEWIPDNVLKAVCSVPPKDLKMSATFIGNSTSIQEIFRRLGDQFSAMF 389
Query: 349 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 384
RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
Score = 89.8 bits (213), Expect = 6e-19
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 1 MREIVHLQTGQCGNQIGSKFWEIISDEHGIDTTGHYHGESDLQLERIGVYYNEADDG 57
MREIVH+Q GQCGNQ+G+ FW I+DEHG+D+ G YHG S+ Q ER+ VY+NEA G
Sbjct: 1 MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGIYHGTSEAQHERLNVYFNEAAGG 57
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 283 bits (694), Expect = 3e-77
Identities = 128/337 (37%), Positives = 200/337 (59%), Gaps = 8/337 (2%)
Query: 55 DDGNNWAKGHYTEGAELVESVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKL 114
D NN+A+GHYT G E+++SVL+ +R+ A+ C LQGF +L
Sbjct: 102 DASNNYARGHYTVGKEMIDSVLERIRRMADNCSGLQGFLVFHSFGGGTGSGLGALLLERL 161
Query: 115 REEYPDRIVNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTL 174
EY + FSV P+P+VS +VVEPYN+ L+ H ++N+D TF +DNEA YDIC R L
Sbjct: 162 NMEYGKKSNLQFSVYPAPQVSTSVVEPYNSVLTTHATLDNSDCTFMVDNEACYDICRRNL 221
Query: 175 RLASPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTA 234
+ PTY +LN L++ +S +T LRF G LN DL + N+VP+PR+HF + ++P+ +
Sbjct: 222 DIERPTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQTNLVPYPRIHFPLVTYSPIVS 281
Query: 235 RNSQVYRALTVPELSQQLFSPVNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLAVQD 294
+ + +V E++ Q F P N M CDPR GRY+ ++RG + ++V + +++
Sbjct: 282 AAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKS 341
Query: 295 KNSSYFVEWIPNNVKVAVCDVPPR--------GVKMAATFVGNTTAIQEIFKRISEQFTL 346
+ + FV+W P K+ +C PP+ V A + NTT+I E + R+ +F L
Sbjct: 342 RRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDL 401
Query: 347 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 383
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 402 MYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEE 438
Score = 42.3 bits (95), Expect = 1e-04
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 1 MREIVHLQTGQCGNQIGSKFWEIISDEHGIDTTG------HYHGESDLQLERIGVYYNEA 54
MRE++ + GQ G QIG+ WE+ EHGI G H + + G +++E
Sbjct: 1 MREVISVHVGQAGVQIGNACWELYCLEHGIGPDGFPTENSEVHKNNSYLNDGFGTFFSET 60
Query: 55 DDGNNWAKGHYTEGAELVESVLDVVR 80
G + Y +L +V+D VR
Sbjct: 61 GQGKFVPRSIY---VDLEPNVIDQVR 83
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 280 bits (686), Expect = 3e-76
Identities = 128/337 (37%), Positives = 197/337 (58%), Gaps = 8/337 (2%)
Query: 55 DDGNNWAKGHYTEGAELVESVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKL 114
D NN+A+GHYT G ELV+ V D +R+ A+ C LQGF +L
Sbjct: 98 DASNNYARGHYTVGKELVDEVTDKIRRIADNCSGLQGFLVFHSFGGGTGSGFGALLLERL 157
Query: 115 REEYPDRIVNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTL 174
EY + FSV P+P+VS +VVEPYN+ L+ H ++ D TF +DNE+ YDIC R L
Sbjct: 158 AMEYTKKSKLQFSVYPAPQVSTSVVEPYNSVLTTHATLDLADCTFMVDNESCYDICRRNL 217
Query: 175 RLASPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTA 234
+ P+Y +LN L++ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ +
Sbjct: 218 DIERPSYENLNRLIAQVVSSITASLRFEGSLNVDLAEFQTNLVPYPRIHFPLVTYAPIVS 277
Query: 235 RNSQVYRALTVPELSQQLFSPVNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLAVQD 294
+ + +V E++ Q F P N M CDPR GRY+ ++RG + ++V + ++
Sbjct: 278 AAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKA 337
Query: 295 KNSSYFVEWIPNNVKVAVCDVPPRGVK--------MAATFVGNTTAIQEIFKRISEQFTL 346
K + FV+W P K+ +CD PP+ ++ A + NTT+I E + R+ +F L
Sbjct: 338 KRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDL 397
Query: 347 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 383
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEE 434
Score = 48.0 bits (109), Expect = 2e-06
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 1 MREIVHLQTGQCGNQIGSKFWEIISDEHGIDTTGHYHGESDLQLERIG--VYYNEADDGN 58
MREI+ + GQ G QIG+ WE+ EHGI G+ + E+ Q G +++E G
Sbjct: 1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGK 60
Query: 59 NWAKGHYTEGAELVESVLDVVR 80
+ Y +L +V+D VR
Sbjct: 61 YVPRSIY---VDLEPNVIDQVR 79
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 202 bits (494), Expect = 5e-53
Identities = 108/349 (30%), Positives = 184/349 (52%), Gaps = 12/349 (3%)
Query: 45 ERIGVYYNEADDGNNWAKGHYTEGAELVESVLDVVRKEAEGCDCLQGFQXXXXXXXXXXX 104
E I + N GNNWA G Y+ + E ++D++ +EA+G D L+GF
Sbjct: 89 ENILITKNGGGAGNNWANG-YSHAERIFEDIMDMIDREADGSDSLEGFSLLHSIAGGTGS 147
Query: 105 XXXXXXXXKLREEYPDRIVNTFSVVP-SPKVSDTVVEPYNATLSVHQLVENTDETFCIDN 163
+L + YP +I+ T+SV P S VSD VV+PYN+ L++ +L N D +DN
Sbjct: 148 GLGSFLLERLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLDN 207
Query: 164 EALYDICFRTLRLASPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 223
AL I L +PT+ N LVS MS TT LR+PG +N DL + +++P PR H
Sbjct: 208 AALAHIAADRLHTQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSPRCH 267
Query: 224 FFMPGFAPLT---ARNSQVYRALTVPELSQQLFSPVNMMAACDP-RHGRYLTVAAIFRGR 279
F + + P T ++ R TV ++ ++L P N M + +P + ++++ I +G
Sbjct: 268 FLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFISILDIIQGE 327
Query: 280 MSMKEVDEQMLAVQDKNSSYFVEWIPNNVKVAVCDVPP---RGVKMAATFVGNTTAIQEI 336
+V + +L ++++ + F+ W P +++VA+ P +++ + N T+I +
Sbjct: 328 ADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGLMLANHTSIASL 387
Query: 337 FKRISEQFTLMFRRKAFLHWYTGEGMDEMEFTEAESNMN---DLVSEYQ 382
FKR +Q+ + +R AFL Y E + E + E +S+ + DL++EY+
Sbjct: 388 FKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRDVVADLINEYE 436
Score = 56.8 bits (131), Expect = 5e-09
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 2 REIVHLQTGQCGNQIGSKFWEIISDEHGIDTTGHYHGESDLQLERIGVYYNEADD 56
REI+ LQ GQCGNQIGS+FW+ + EHGI G + ++R V++ ++DD
Sbjct: 3 REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFATEGVDRKDVFFYQSDD 57
>SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1258
Score = 27.9 bits (59), Expect = 2.7
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 32 TTGHYHGESDLQLERIGVYYNEADDGNNWAKGHYTEGAELVESVLDVVRKEA 83
T G YH L L I V+Y + + + A GH+ G L ++L V +A
Sbjct: 1054 TNGFYHSLL-LFLCSIAVFYYDGPNKDGLASGHWVWGTTLYAAILATVLGKA 1104
>SPBC2G2.17c |||beta-glucosidase Psu2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 319
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 35 HYHGESDLQLERIGVYYNEADDGNNWAKGHYTEG 68
+Y +S E + V+ NE DD NWA ++ G
Sbjct: 218 YYVNKSGRSAEDVCVWGNEGDDYGNWAPMNFGSG 251
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 329 NTTAIQEIFKRISEQFTLMFRRKAFLHWYTGEGMDE 364
N++ IQ + K I+ T +R ++ Y+G G+DE
Sbjct: 193 NSSEIQALEKSINTFTTYQYRAPEMINLYSGLGIDE 228
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 61 AKGHYTEGAELVESVLDVVRKEAEGCDCLQ 90
A+GH G ELV + D +RK++E L+
Sbjct: 183 AEGHPDVGVELVRAGADTLRKDSENHTALE 212
>SPAC3F10.02c |trk1|sptrk|potassium ion transporter
Trk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 841
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 47 IGVYYNEADDGNNWAKGHYTE 67
+GVY E D+G ++ K H TE
Sbjct: 693 LGVYRTEDDEGKSFLKDHLTE 713
>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1958
Score = 26.2 bits (55), Expect = 8.4
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 339 RISEQFTLMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 380
++ E+F+L+F RK L WY G+ E + N+N SE
Sbjct: 1714 KLLERFSLIFLRKCALLWYCRYGVS----FETQPNLNFQNSE 1751
>SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 865
Score = 26.2 bits (55), Expect = 8.4
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 150 QLVENTDETFCIDNEALYDICFRTLRLASPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 209
Q+ NTD + N LY A T DLN SL + GV +F G + +
Sbjct: 301 QVCTNTDSSRNAGNAILYQ--------AVRTILDLNSDSSLRVLGVNILAKFLGNRDNNT 352
Query: 210 RKLAVNMV 217
R +A+NM+
Sbjct: 353 RYVALNML 360
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.135 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,751,656
Number of Sequences: 5004
Number of extensions: 69088
Number of successful extensions: 173
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 153
Number of HSP's gapped (non-prelim): 17
length of query: 409
length of database: 2,362,478
effective HSP length: 74
effective length of query: 335
effective length of database: 1,992,182
effective search space: 667380970
effective search space used: 667380970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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