Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001706-TA|BGIBMGA001706-PA|IPR012934|Zinc finger,
AD-type, IPR007087|Zinc finger, C2H2-type
(535 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 63 8e-11
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 54 5e-08
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 52 3e-07
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 51 4e-07
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 49 2e-06
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 48 3e-06
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 47 8e-06
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 44 5e-05
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 44 5e-05
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 40 7e-04
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 40 0.001
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 36 0.011
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 33 0.13
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 33 0.13
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 32 0.17
SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces pom... 31 0.30
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 31 0.40
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 31 0.53
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 30 0.93
SPAC6B12.18 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 30 0.93
SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein L10a... 29 1.6
SPAC13F5.06c |sec10||exocyst complex subunit Sec10|Schizosacchar... 29 2.1
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 2.1
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 28 2.8
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 28 3.7
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 27 5.0
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 27 5.0
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 27 6.5
SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 27 6.5
SPBC13E7.08c |||RNA polymerase II associated Paf1 complex |Schiz... 27 6.5
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 63.3 bits (147), Expect = 8e-11
Identities = 58/226 (25%), Positives = 87/226 (38%), Gaps = 45/226 (19%)
Query: 344 HLRNHHGGSRPECEQ--CGKTFINNDSLAEHLLIHKGVKNYECEL--CGARFRTRNQVKY 399
HLR H C+ C K F L H H VK + C C A+F T+ ++
Sbjct: 43 HLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLER 102
Query: 400 HELKHSSTRDYYCV-----ECDSRHR--------CGT-----------CDKRFSTAGALA 435
H H + Y C EC S+H+ C T C+ RF+T L
Sbjct: 103 HIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQ 162
Query: 436 THRAVRHEG----ARPHXXXXXXXXXXXXXXXHKHVRAVHRGDRPPAVHVCHTCGKAFRS 491
H HE + PH H+R H V C CG+ F++
Sbjct: 163 NHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAH-------VPSCSICGRQFKT 215
Query: 492 SSVLTNHVRTH----TGEKPFSC--EVCSRRFSQRTAMRTHLRLVH 531
++ L +HV H K + C E C + F++ +A++ H+ ++H
Sbjct: 216 AAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIH 261
Score = 51.6 bits (118), Expect = 3e-07
Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 20/186 (10%)
Query: 357 EQCGKTFINNDSLAEHLLIHKGVKNYECEL--CGARFRTRNQVKYHELKHSSTRDYYCVE 414
E+CGK + L +HL H + + C+ C F ++ +K H+ H++ + + C
Sbjct: 28 EECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSC-- 85
Query: 415 CDSRHRCGTCDKRFSTAGALATHRAVRHEGARPHXXX--XXXXXXXXXXXXHKHVRAVHR 472
H G CD +F T L H V H +P+ H+ A H
Sbjct: 86 ----HYDG-CDAQFYTQQHLERHIEV-HRKPKPYACTWEGCDECFSKHQQLRSHISACHT 139
Query: 473 GDRP-PAVHVCHTCGKAFRSSSVLTNHV-RTHTGEKPFSC--EVC--SRRFSQRTAMRTH 526
P P + C F + L NHV R H +SC E C F + + ++ H
Sbjct: 140 HLLPYPCTY--QDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNH 197
Query: 527 LRLVHL 532
+R H+
Sbjct: 198 IREAHV 203
Score = 41.1 bits (92), Expect = 4e-04
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 318 CVQCGIRMIDKNSIVHHYRNSKTHRGHLRNHHGGSRPECEQCGKTFINNDSLAEHL-LIH 376
C CG + + HH +T + +H E C K+F + +L +H+ +IH
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHC----PMEGCKKSFTRSSALKKHISVIH 261
Query: 377 KGVKNYECELCGARFRTRNQVKYHELKHSSTRDY--YCVECDSRH 419
+G + C+ CG +F ++ ++ H + + + + Y EC +H
Sbjct: 262 EGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYINECGIKH 306
Score = 40.3 bits (90), Expect = 7e-04
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 20/166 (12%)
Query: 283 ATSSRGTFECAVCHMYLPTSYSHSVHTLIHTRRYECV--QCGIRMIDKNSIVHHYRNSKT 340
A + G EC H L S+ + HT H Y C C +R K + +H
Sbjct: 114 ACTWEGCDECFSKHQQL-RSHISACHT--HLLPYPCTYQDCELRFATKQKLQNH-----V 165
Query: 341 HRGHLRNHHGGSRPECEQCGKTFINNDSLAEHLLIHKGVKNYECELCGARFRTRNQVKYH 400
+R H + E + F L H+ + C +CG +F+T +++H
Sbjct: 166 NRAHEKIISYSCPHESCVGHEGFEKWSQLQNHI---REAHVPSCSICGRQFKTAAHLRHH 222
Query: 401 ELKHSSTRDYYCVECDSRHRCGT--CDKRFSTAGALATHRAVRHEG 444
+ H +T +E + C C K F+ + AL H +V HEG
Sbjct: 223 VVLHQTT-----LEERKTYHCPMEGCKKSFTRSSALKKHISVIHEG 263
Score = 39.5 bits (88), Expect = 0.001
Identities = 43/192 (22%), Positives = 62/192 (32%), Gaps = 16/192 (8%)
Query: 344 HLRNHHGGSRPEC--EQCGKTFINNDSLAEHL-LIHKGVKNYECEL--CGARFRTRNQVK 398
H+ H C E C + F + L H+ H + Y C C RF T+ +++
Sbjct: 103 HIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQ 162
Query: 399 YHELK-HSSTRDYYCVECDSRHRCGTCDKRFSTAGALATHRAVRHEGARPHXXXXXXXXX 457
H + H Y C H + F L H H P
Sbjct: 163 NHVNRAHEKIISYSCP-----HESCVGHEGFEKWSQLQNHIREAHV---PSCSICGRQFK 214
Query: 458 XXXXXXHKHVRAVHRGDRPPAVHV-CHTCGKAFRSSSVLTNHVRT-HTGEKPFSCEVCSR 515
H V + H C K+F SS L H+ H G F C+ C
Sbjct: 215 TAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGT 274
Query: 516 RFSQRTAMRTHL 527
+F + ++ HL
Sbjct: 275 KFGYKHMLQRHL 286
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 54.0 bits (124), Expect = 5e-08
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 481 VCHTCGKAFRSSSVLTNHVRT-HTGEKPFSCEVCSRRFSQRTAMRTHLRL 529
VC C K F+ S L H+R+ HT EKPF C +C +RFS+R +R H RL
Sbjct: 424 VCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERL 472
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 350 GGSRPECEQCGKTFINNDSLAEHLL-IHKGVKNYECELCGARFRTRNQVKYHELKH 404
GG C +C K F ++ L H+ +H K + C +CG RF R+ ++ HE H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLH 473
Score = 33.5 bits (73), Expect = 0.075
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 335 YRNSKTHRGHLRNHHGGSRPECEQCGKTFINNDSLAEHLLIH 376
++ S+ R H+R+ H +P CGK F D+L +H +H
Sbjct: 432 FKRSEHLRRHIRSLHTSEKPFVCICGKRFSRRDNLRQHERLH 473
Score = 31.9 bits (69), Expect = 0.23
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 504 GEKPFSCEVCSRRFSQRTAMRTHLRLVHLS 533
G K F C CS++F + +R H+R +H S
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTS 448
Score = 31.9 bits (69), Expect = 0.23
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 465 KHVRAVHRGDRPPAVHVCHTCGKAFRSSSVLTNHVRTHTGEKP 507
+H+R++H ++P VC CGK F L H R H P
Sbjct: 440 RHIRSLHTSEKP---FVC-ICGKRFSRRDNLRQHERLHVNASP 478
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 51.6 bits (118), Expect = 3e-07
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Query: 480 HVCHTCGKAFRSSSVLTNHVRTHTGEKPFSC-EV------CSRRFSQRTAMRTHLRLVH 531
+VC TC +AF L H+R+HT EKPF+C E+ C R+FS+R + H + +H
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIH 128
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 379 VKNYECELCGARFRTRNQVKYHELKHSSTRDYYCVECDSRHRCGTCDKRFSTAGALATHR 438
VK Y CE C F +K H H++ + + C E D C ++FS L H+
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPT--GCGRQFSRRDLLLRHQ 124
Query: 439 AVRHEGARP 447
H +P
Sbjct: 125 QKIHRNPQP 133
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 356 CEQCGKTFINNDSLAEHLLIHKGVKNYEC-EL------CGARFRTRNQVKYHELK 403
CE C + F + L H+ H K + C E+ CG +F R+ + H+ K
Sbjct: 72 CETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQK 126
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 51.2 bits (117), Expect = 4e-07
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 477 PAVHVCHTCGKAFRSSSVLTNHVRTHTGEKPFSCEV--CSRRFSQRTAMRTHLRLVHLSR 534
P + C C KAF T H+RTHTGEKP C C++RFS+ + H R +H +
Sbjct: 23 PRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR-IHTNA 81
Query: 535 N 535
N
Sbjct: 82 N 82
Score = 30.7 bits (66), Expect = 0.53
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 353 RP-ECEQCGKTFINNDSLAEHLLIHKGVKNYECEL--CGARFRTRNQVKYHELKHSS 406
RP +C C K F + H+ H G K + C C RF +++ H H++
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 482 CHTCGKAFRSSSVLTNHVRTHTGEKPFSCEV--CSRRFSQRTAMRTHLRLVH 531
C G S L H+R+HTGEKPF C V C R F++ A+ H+R VH
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 344 HLRNHHGGSRPECE--QCGKTFINNDSLAEHL 373
HLR+H G C +C ++F +D+LA+H+
Sbjct: 96 HLRSHTGEKPFICSVPECDRSFTRSDALAKHM 127
Score = 26.6 bits (56), Expect = 8.6
Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 16/96 (16%)
Query: 321 CGIRMIDKNSIVHHYRNSKTHR-------GHLRNHHGGSRP-------ECEQCGKTFINN 366
C ++ +++VHH N T + +H G RP +C + G +
Sbjct: 31 CEQDLLTLDNLVHHIHNGTTSNLRLISNINSILDHIGNRRPKYTCEWDDCPRKGMVQTSR 90
Query: 367 DSLAEHLLIHKGVKNYECEL--CGARFRTRNQVKYH 400
+L HL H G K + C + C F + + H
Sbjct: 91 FALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKH 126
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 48.0 bits (109), Expect = 3e-06
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 482 CHTCGKAFRSSSVLTNHVRTHTGEKPFSCEV--CSRRFSQRTAMRTHLRLVHLSR 534
C C + F H+R+HTGEKPF C C +RF++R + H+R HL +
Sbjct: 6 CPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVR-THLRK 59
Score = 33.9 bits (74), Expect = 0.057
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 355 ECEQCGKTFINNDSLAEHLLIHKGVKNYECEL--CGARFRTRNQVKYHELKH 404
EC C + F + H+ H G K +EC C RF R+++ H H
Sbjct: 5 ECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 7/59 (11%)
Query: 379 VKNYECELCGARFRTRNQVKYHELKHSSTRDYYCVECDSRHRCGTCDKRFSTAGALATH 437
+K+YEC C F + H H+ + + C +C KRF+ L H
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFEC-------SYPSCKKRFTRRDELIRH 52
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 46.8 bits (106), Expect = 8e-06
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 465 KHVRAVHRGDRPPAVHVCHTCGKAFRSSSVLTNHVRTHTGEKPFSCEVCSRRFSQRTAMR 524
K RA GD P C K+F L H RTH K FSC C+R F++ +
Sbjct: 14 KRSRAHRLGD-PRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLN 72
Query: 525 THLRLVHLSR 534
H++ +HL +
Sbjct: 73 RHVQQMHLQK 82
Score = 31.5 bits (68), Expect = 0.30
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 359 CGKTFINNDSLAEHLLIHKGVKNYECELCGARFRTRNQVKYH 400
C K+F + L H H+ VK + C C F + + H
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRH 74
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 44.0 bits (99), Expect = 5e-05
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 482 CHTCGKAFRSSSVLTNHVRTHTGEKPFSCEV--CSRRFSQRTAMRTHLRL 529
C C + F S L H +HTGE+PF C+ C + F+ R+ MR H R+
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRI 519
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 5/97 (5%)
Query: 138 DYEDNITVE-----QIRANVEEVEKFSEEDLNDFLDEKEIELREESGXXXXXXXXXXXXX 192
+++DN++ E + +N + ++ +++ D + R
Sbjct: 395 NFKDNMSAELSVVATLASNSAQAHPMGQQSDSNYSDHHNNDKRAHVSRRHSTSRKIAQSH 454
Query: 193 XXXLETTKNLKMPYHCHLCFKGFNFEVKLKNHMEKHS 229
T+ + Y C C +GF+ LK H H+
Sbjct: 455 TGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHT 491
Score = 26.6 bits (56), Expect = 8.6
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
Query: 334 HYRNSKTHRGHLRNHHGGSRPECEQCGKTFINNDSLAEHLLIHKGVKNYECELCGARFRT 393
H+ N K R H+ H SR + T ++ S A ++ Y C C F
Sbjct: 431 HHNNDK--RAHVSRRHSTSRKIAQS--HTGSSSTSSAANV-------RYRCTECLQGFSR 479
Query: 394 RNQVKYHELKHSSTRDYYC 412
+ +K H H+ R + C
Sbjct: 480 PSSLKIHTYSHTGERPFVC 498
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 44.0 bits (99), Expect = 5e-05
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 359 CGKTFINNDSLAEHLLIHKGVKNYECELCGARFRTRNQVKYHELKHSSTRDYYCVECDSR 418
C K F +L H+ H + ++C +C F ++ + HE H+ + + CV C+ R
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Score = 43.2 bits (97), Expect = 9e-05
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 485 CGKAFRSSSVLTNHVRTHTGEKPFSCEVCSRRFSQRTAMRTHLRL 529
C K F + L +H+ THT +PF C +C + F+++ R H +L
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQL 621
Score = 41.5 bits (93), Expect = 3e-04
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 482 CHTCGKAFRSSSVLTNHVRTHTGEKPFSCEVCSRRFSQRTAMRTHLR 528
C C K+F H + HTG K F+C C++RF++ A+ H +
Sbjct: 602 CSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYK 648
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 342 RGHLRNHHGGSRP-ECEQCGKTFINNDSLAEHLLIHKGVKNYECELCGARFRTRNQVKYH 400
+ H+ N H RP +C C K+F H +H G+K + C C RF + + H
Sbjct: 588 KSHM-NTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
Score = 31.9 bits (69), Expect = 0.23
Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 290 FECAVCHMYLPTSYSHSVHTLIHT--RRYECVQCGIRMIDKNSIVHHYRN 337
F+C++C + H +HT + + CV C R +++ HY++
Sbjct: 600 FQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKS 649
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 40.3 bits (90), Expect = 7e-04
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 485 CGKAFRSSSVLTNHVRTHTGEKPFSCEVCSRRFSQRTAMRTHLRLVHLSRN 535
C K+F H R+HT K F C CS F++ + H+ H+ +N
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQN 74
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 469 AVHRGDRPPAVHVC--HTCGKAFRSSSVLTNHVRTHTGEKPFSCEVCSRRFSQRTAMRTH 526
+++ G +VC + C K + +H++TH ++P+ C++C F + ++ H
Sbjct: 432 SLYCGPEADGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRH 491
Query: 527 LRL 529
LR+
Sbjct: 492 LRI 494
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 359 CGKTFINNDSLAEHLLIHKGVKNYECELCGARFRTRNQVKYHELKHSSTRDYYCVECDSR 418
C K ++ H+ H + Y C+LC A F + +K H H + R Y C EC R
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKR 508
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 466 HVRAVHRGDRPPAVHVCHTCGKAFRSSSVLTNHVRTHTGEKPFSCEVCSRRFSQRTAMRT 525
H++ H DRP + C C F L H+R H +P+ CE C +RF++ A+
Sbjct: 463 HIQT-HLSDRP---YRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNR 517
Query: 526 H 526
H
Sbjct: 518 H 518
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 344 HLRNHHGGSRPECEQCGKTFINNDSLAEHLLIHKGVKNYECELCGARFRTRNQVKYHELK 403
H++ H C+ C F+ + L HL IH+ + Y CE C RF + + H+ +
Sbjct: 463 HIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRHKQR 521
Query: 404 H 404
+
Sbjct: 522 N 522
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 205 PYHCHLCFKGFNFEVKLKNHMEKH 228
PY C LC GF LK H+ H
Sbjct: 472 PYRCDLCKAGFVRHHDLKRHLRIH 495
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 36.3 bits (80), Expect = 0.011
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 479 VHVCHTCGKAFRSSSVLTNHVRTHTGEKPFSCEVCSRRFSQRTAMRTHLRLVH 531
V C C K F LT H H+ +P C C + ++ ++ H++ H
Sbjct: 30 VFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
Score = 34.7 bits (76), Expect = 0.033
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 356 CEQCGKTFINNDSLAEHLLIHKGVKNYECELCGARFRTRNQVKYH 400
C+QC K F +++L H H + C C + + ++ +K H
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 32.7 bits (71), Expect = 0.13
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Query: 290 FECAVCHMYLPTSYSHSVHTLIHTRRYECVQCGIRMIDKNSIVHHYRNSKTHRGHLRNHH 349
F C C + LP S ++ + + C CG M + V S +H H R H
Sbjct: 243 FHCKTCGLCLPISVFNTHRCIERSTDCNCPICGEYMFNSRERVIFL--SCSHPLHQRCHE 300
Query: 350 GGSRP--ECEQCGKTFINNDSL 369
R C C KT IN +SL
Sbjct: 301 EYIRTNYRCPTCYKTIINVNSL 322
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 32.7 bits (71), Expect = 0.13
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 485 CGKAFRSSSVLTNHVRT-HTGEKP-FSCEVCS--RRFSQRTAMRTHLRLVH 531
C F + L H T H +P F CE+C R FS+ A+ HLR+ H
Sbjct: 585 CNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRHLRVKH 635
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 32.3 bits (70), Expect = 0.17
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 98 GYHEDLQHEKLTSPSEIQLFVLPMLPIKYEEEVKEESFYSDYEDNI-TVEQIRANVEEVE 156
G EDL+ E+ +S +E++ + + EE E F ++ E+N E++R EE +
Sbjct: 617 GDFEDLEDEENSSDNEMEESSGSSVTAENEESADEVDFQTEREENARKKEELRLRFEEED 676
Query: 157 KFSEE--DLNDFLDEKE 171
+ E D++ + +EKE
Sbjct: 677 RGDPEKKDVDWYTEEKE 693
>SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 31.5 bits (68), Expect = 0.30
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 119 LPMLPIKYEEEVKEESFYSDYEDNITVEQIRANVEEV--EKFSEEDLNDFLDEKEIEL 174
L L +KY+E +K + F+S+ E ++T EQI V+EV +EEDL + LD E ++
Sbjct: 339 LEQLKLKYKENLKLKEFFSE-ESSVTKEQI---VDEVMTRIINEEDL-EKLDLSECDI 391
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 31.1 bits (67), Expect = 0.40
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 14/76 (18%)
Query: 380 KNYECEL--CGARFRTRNQVKYHELK-HSST----------RDYYCVECDSRHRCGTCDK 426
K Y+C + C ++ +N +KYH+L H S + VE + +RC C K
Sbjct: 348 KPYKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPAPIPHQGFVVE-NKPYRCEVCSK 406
Query: 427 RFSTAGALATHRAVRH 442
R+ L HR H
Sbjct: 407 RYKNLNGLKYHRTHSH 422
Score = 31.1 bits (67), Expect = 0.40
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 506 KPFSCEVCSRRFSQRTAMRTHLRLVHL 532
KP+ CEVCS+R+ ++ H HL
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYHRTHSHL 423
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 30.7 bits (66), Expect = 0.53
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 118 VLPMLPIKYEEEVKEESFYSDYEDNITVEQIRANVEEVE-KFSEEDLNDFLDEKEIE 173
+L +L +K +EE + + +YE+++TV++++ + E+E E + EKE E
Sbjct: 324 ILDLLEMKQQEE-NDRISHIEYENDLTVKKLKRRISELEMAVKEYESEKSYSEKEYE 379
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 29.9 bits (64), Expect = 0.93
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 354 PECEQCGKTFINNDSLAEHLLIHKGVKNYECELCGARFRTRNQVKYHELKHSSTRDYY-C 412
P+CE C F ++D L +H K + Y C+ R + Y L+ +D+Y C
Sbjct: 245 PKCEFCNTHFYDDDELFKHCR-EKHERCYICDQVAGRPTHQYFKNYDSLERHFEKDHYIC 303
Query: 413 VECDSRHR 420
E + R
Sbjct: 304 RERECLER 311
>SPAC6B12.18 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 73
Score = 29.9 bits (64), Expect = 0.93
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 119 LPMLPIKYEEEVKEESFYSDYEDNITVEQIRANVEEVEKFSEEDLNDFLDEKEIEL 174
L LP+ +E V+ + +Y ++ + Q N E +K E ND +EK I L
Sbjct: 19 LKSLPVGFEP-VEVDDYYISLKEQVRAMQDHCNEEFTKKMQTEGKNDVPEEKPIIL 73
>SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 216
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 143 ITVEQIRANVEEVEKFSEEDLNDFLDEKEIEL 174
++V +R+NVE++ K SEE +F + E+++
Sbjct: 4 VSVASVRSNVEQILKGSEEKKRNFTETVELQI 35
>SPAC13F5.06c |sec10||exocyst complex subunit
Sec10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 28.7 bits (61), Expect = 2.1
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 262 LSTVIPGETVPSSDGLEVLSMATSSRGTFECAVCHMYLPTSYSHSVHTLIHTRRYECVQC 321
+S VIP V +S E +++ +SS ECAV ++ T ++ H I Y +
Sbjct: 591 MSIVIPFTGVTASSRRETVNILSSSISVIECAVNDVFYATVHALGDHLEIILSPYRQISY 650
Query: 322 GI--RMIDKNSIVHH--YRNSKTHRGHLRN 347
+ ID ++ + RN + + +++N
Sbjct: 651 AMTEEQIDSSTELRQSMTRNVQNYLDYIKN 680
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 125 KYEEEVKEESFYSDYEDNITVEQIRANVEEVEKFSEEDLNDFLDEKEIELREES 178
K E E + E+ + D+E + ++ N E V + E D+ E I+ +E+S
Sbjct: 406 KEENEAEAEAVFDDWEAALEEPEVAENNEVVTEKKETDIKSDAVEHSIKDKEDS 459
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 134 SFYSDYEDNITVEQIRANVEEVEKFSEEDLNDFLDEKEIELREE 177
S+++D++ N V + N +VE S + + D+ D ++ EE
Sbjct: 665 SYWTDFQSNSKVLEENLNTTDVEFHSSKKIKDYEDLEDANFDEE 708
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 127 EEEVKEESFYSDYEDNITVEQIRANVEEVEKFSEEDLNDFLDEKEIELREESG 179
EEE +EE+ D N T ++E F E+D +F DE+ E + E+G
Sbjct: 144 EEEEEEENEVDDEAPNRTQGHRAGVIDEFADFIEQD--EFEDEERQEEKYETG 194
Score = 27.1 bits (57), Expect = 6.5
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 127 EEEVKEESFYSDYEDNITVEQIRANVEEVEKFSEEDLNDFLDEKEIELREES 178
E +V+E D ED + E R + S D D LDE+++EL E+
Sbjct: 65 ERQVREGFIVEDEEDEVPQEIRRKKKRKKHAESTAD-QDMLDEEDLELVMEN 115
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 27.5 bits (58), Expect = 5.0
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 9/54 (16%)
Query: 129 EVKEESFYSDYEDNITVEQIRANVEEV-----EKFSE---EDLNDFLDEKEIEL 174
EV EE+ +Y D +TV +I+ +EE E FSE ++L + DE+E+EL
Sbjct: 592 EVTEEN-KREYVDLVTVWRIQKRIEEQFNAFHEGFSELIPQELINVFDERELEL 644
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Query: 464 HKHVRAVH---RGDRPPAVHVCHTCGKAFRSSSVLTNHVRTHTGEKPFSCEVC 513
H+ V+ V R D +VC C K F S VL+ T E F+C VC
Sbjct: 117 HQLVKTVEDRMRNDFDSKGYVCPFCNKKFSSLDVLS----LVTNEGTFACNVC 165
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 145 VEQIRANVEEVEKFSEEDLNDFLDEKEIELREES 178
V++ N EE FSE++L+D LDE + E +ES
Sbjct: 40 VDEDLDNKEEALDFSEDELSD-LDENQFENFDES 72
>SPBC1685.08 |||histone deacetylase complex subunit
Cti6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 424
Score = 27.1 bits (57), Expect = 6.5
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 128 EEVKEESFYSDYEDNITVEQIRANVEEVEKFSEEDLN---DFLDEKEIELREESG 179
+E+ E+S S E+ E NV E + EE ++ + DE++ ++EESG
Sbjct: 213 DEILEDSKESKDENEENKETSTTNVAETDAPEEETVDTVEEIADEEKHSVKEESG 267
>SPBC13E7.08c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 147 QIRANVEEVEKFSEEDLNDFLDEKEIELREE 177
Q R +++E+ E+DL DF+ E+E E +E
Sbjct: 319 QYRGYNKDLEENEEDDLGDFIAEEEEEEEQE 349
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.134 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,437,582
Number of Sequences: 5004
Number of extensions: 103069
Number of successful extensions: 417
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 317
Number of HSP's gapped (non-prelim): 84
length of query: 535
length of database: 2,362,478
effective HSP length: 76
effective length of query: 459
effective length of database: 1,982,174
effective search space: 909817866
effective search space used: 909817866
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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