Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001705-TA|BGIBMGA001705-PA|undefined
(300 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 35 0.012
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 32 0.12
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 30 0.47
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.47
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 30 0.47
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 29 0.62
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 29 1.1
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 28 1.4
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 28 1.9
SPAC25B8.11 |||transcription factor|Schizosaccharomyces pombe|ch... 28 1.9
SPAC16E8.11c |tfb1||transcription factor TFIIH complex subunit T... 28 1.9
SPCC777.14 |prp4||serine/threonine protein kinase Prp4|Schizosac... 28 1.9
SPAC24B11.05 |||pyrimidine 5'-nucleotidase |Schizosaccharomyces ... 27 2.5
SPAC22A12.11 |dak1||dihydroxyacetone kinase Dak1|Schizosaccharom... 27 2.5
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 27 2.5
SPBC18E5.13 ||SPBC23G7.03|translation initiation factor |Schizos... 27 2.5
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 27 3.3
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 27 3.3
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 27 3.3
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 27 3.3
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 27 4.3
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 4.3
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 27 4.3
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 26 5.7
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 26 5.7
SPBC215.03c |csn1||COP9/signalosome complex subunit Csn1|Schizos... 26 5.7
SPAC20G8.01 |cdc17||ATP-dependent DNA ligase Cdc17|Schizosacchar... 26 7.6
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 26 7.6
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 26 7.6
SPAC18G6.06 |||U3 snoRNP-associated protein Utp11|Schizosaccharo... 26 7.6
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 7.6
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 26 7.6
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 26 7.6
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 35.1 bits (77), Expect = 0.012
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 125 ETVNELKEKLIERRKDVFYR-LHKNEKDLSFSKKTVVNEIDDVTQEKVAEKAKLNMGNFN 183
E V +L+ + ER + F + + +NE+ +S K+ V D++TQ ++E+ F+
Sbjct: 567 EVVGKLRTEA-EREIEKFEKTIRENEESISLFKEEVEKLTDEITQ--LSERYNDKCHEFD 623
Query: 184 LIHSNKR---KTNNSNLVNKRLRNSHHLTDCKKINAKIDVL-----ENNVTIQKSPKIEL 235
+ + + NN + + S+ L K A++D L EN I +
Sbjct: 624 ELQKRLQTLEEENNKAKEDSTSKTSNLLEQLKMTEAEVDSLRKENEENKQVIALKESELV 683
Query: 236 KHKDN-VELQKRLKTDIDIVDCTSTERETITNINEAL 271
K DN + L +++++ D + TE E++T E+L
Sbjct: 684 KSNDNKLLLNEQIESLNDQLSQLKTEMESVTTSKESL 720
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 510
Score = 31.9 bits (69), Expect = 0.12
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 19 LCTTRLPYRQGRKLTAVKVYTVNNESTH 46
+C LPY QG + ++VY V+N + H
Sbjct: 69 ICKRDLPYLQGLNINTIRVYQVDNSANH 96
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 29.9 bits (64), Expect = 0.47
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 135 IERRKDVFYRLHKNEKDLSFSKKTVVNEIDDVTQEKVAE-KAKL 177
+E V Y L K E+ S S KTV+ EI +QE V E +AKL
Sbjct: 510 LEEECAVQYHLPKREELQSNSNKTVIIEISGKSQEAVREGRAKL 553
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.47
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 125 ETVNELKEKLIERRKDVFYRLHKNEKDLSFSKKTVVNEIDDVTQEKVAEKAKLNMGNFNL 184
E N+L EK +R K++ + KN S + + IDD+ +++V EK K N NF++
Sbjct: 1609 ELENQLNEKS-QRIKELEEQAQKN------SSENTHDNIDDMIKQQVEEKLKENSANFDV 1661
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.9 bits (64), Expect = 0.47
Identities = 22/91 (24%), Positives = 38/91 (41%)
Query: 123 EMETVNELKEKLIERRKDVFYRLHKNEKDLSFSKKTVVNEIDDVTQEKVAEKAKLNMGNF 182
E+E + KL E + L K N +DD+ ++ A + N N
Sbjct: 1096 ELEELTSKYGKLGEENAQIKDELLALRKKSKKQHDLCANFVDDLKEKSDALEQLTNEKNE 1155
Query: 183 NLIHSNKRKTNNSNLVNKRLRNSHHLTDCKK 213
++ + +NN LV +R ++ L+D KK
Sbjct: 1156 LIVSLEQSNSNNEALVEERSDLANRLSDMKK 1186
Score = 27.1 bits (57), Expect = 3.3
Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 10/143 (6%)
Query: 156 KKTVVNEIDDVTQEKVAEKAKLNMGNFNLIHSNKRKTNNSNLVNKRLRNSHHLTDCKKIN 215
K ++NE+ V + A + + + + L SNK+ N S++ D
Sbjct: 132 KSNLLNELKQVRSKLAALEHENGILSLQLSSSNKKDKNTSSVTTLTSEE-----DVSYFQ 186
Query: 216 AKIDVLENNVTIQKSPKIELKHKDNVELQKRLKTDIDIVDCTSTERETITNINEALNYNK 275
K+ +E+N + ++S +L + +K K + D +E +++I +L +
Sbjct: 187 KKLTNMESNFSAKQSEAYDLSRQLLTVTEKLDKKEKDY----EKIKEDVSSIKASLAEEQ 242
Query: 276 FGNEIIRNIVNKPPNKIIFSFNK 298
N+ +R + K++ S NK
Sbjct: 243 ASNKSLRG-EQERLEKLLVSSNK 264
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 29.5 bits (63), Expect = 0.62
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 120 YAPEMETVNELKEKLIERRKDVFYRLHKNEKDLSFSK 156
Y PEME + E++ + ER+K+ +L K KD+ SK
Sbjct: 267 YVPEMERMKEIQRQTKERQKEA--QLSKLMKDMHVSK 301
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 28.7 bits (61), Expect = 1.1
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 115 VLHVCYAPEMETVNELKEKLIERRKDVFYRLHKNEKDLSFSK--KTVVNEIDDVTQEKVA 172
++ VC P V + + K + RKD F L NEK++S K KT + + KV
Sbjct: 131 LVQVCQ-PVRHGVVDSETKFVIERKDSFTFLASNEKNISSFKRGKTETDAELVIRPSKVH 189
Query: 173 EKAKLNMGNFNLIH 186
+ + + N +LIH
Sbjct: 190 TEIQWCLQNCSLIH 203
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 28.3 bits (60), Expect = 1.4
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 219 DVLENNVTIQKSPKIELKHKDNVELQKRLKTDIDIVDCTSTERETITNINEALNYNK 275
D E++V KS +E KH+++VE+ K K D + TE T + + E NY++
Sbjct: 527 DKSEDSVP-SKSSVLEDKHENSVEIDK--KADDSLPSNNKTEGYTPSVVREEKNYSE 580
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 191 KTNNSNLVNKRLRNSHHLTDCKKINAKIDVLENNVTIQKSPKIELKHKDNVELQKR-LKT 249
KTN ++ R HL K + I + ++ I +K+ + L K ++
Sbjct: 761 KTNRVRIIASNKRE--HLQAAKSVFQSISGDLVTLAVECRSSITRVYKEFIRLSKLCMRI 818
Query: 250 DIDIVDCTSTERETITNIN 268
+VDC S RE + +N
Sbjct: 819 SSTVVDCVSAVREACSGVN 837
>SPAC25B8.11 |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 27.9 bits (59), Expect = 1.9
Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 192 TNNSNLVNKRLRNSHHLTDCK--KINAKIDVLENNVTIQKSPKIELK-HKDNVELQKRLK 248
+NN R R + +C+ K ++ + N + KI H ++ K+ K
Sbjct: 9 SNNGTERPYRSRKTRPCDNCRLRKSRCVVESIGNPCLLCTQLKIPCTYHLPPIKRNKQKK 68
Query: 249 TDIDIVDCTSTERETITNINEALNYNKFGNEI 280
+ D T +E T TN + YN GN +
Sbjct: 69 QQDSVSDDTPSEATTTTNDDRDPKYNALGNNL 100
>SPAC16E8.11c |tfb1||transcription factor TFIIH complex subunit
Tfb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 477
Score = 27.9 bits (59), Expect = 1.9
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 122 PEMETVNELKEKLIERRKDVFYRLHKNEKDLSFSKKTVVNEI-DDVTQEKVAEKAKLNMG 180
P M+ +N+L E+L+E+ R + NE + ++ K++ +++ ++ + KV K K G
Sbjct: 253 PFMKNINQLSERLLEKSLGNSKRFN-NENEETYLKESGFHDLEEEASDSKVVLKIK---G 308
Query: 181 NFNLIHSN 188
L+ +N
Sbjct: 309 QDQLLENN 316
>SPCC777.14 |prp4||serine/threonine protein kinase
Prp4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 477
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 123 EMETVNELKEKLIERRKDVFYRLHKNEKDLSFSKKTVVNEIDDVTQEKVAEKAKLNMGNF 182
E E + + +++ +E K + + DLS +K + ++D V+ K E N
Sbjct: 8 EDEIIQQRRKRRLEILKK-YQQTGNGHSDLSIPEKKLKEDVDQVSTTKPIEAVPKMKTNA 66
Query: 183 NLIHSNKRKTNNS 195
+ I NK +N++
Sbjct: 67 SKIEINKEGSNSN 79
>SPAC24B11.05 |||pyrimidine 5'-nucleotidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 226
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 76 LTKEYECEIFTEAYHIQYEKIQSARIAKKYLDCKNYYGGVLHVCY 120
L K+Y+C IFT AY + ++ KYL ++ + G+ + Y
Sbjct: 102 LRKKYKCWIFTNAYIVHANRV------LKYLGIEDCFDGITYCDY 140
>SPAC22A12.11 |dak1||dihydroxyacetone kinase
Dak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 27.5 bits (58), Expect = 2.5
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 108 CKNYYGGVLHVCYAPEMETVNELKEKLIERRKDVFYRLHKNEK 150
CKNY G +LH A E + K +LI DV K+ K
Sbjct: 103 CKNYTGDILHFGMALEKQRTAGKKAELIAVADDVSVGRKKSGK 145
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 27.5 bits (58), Expect = 2.5
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 16/138 (11%)
Query: 123 EMETVNELKEKLIERRKDVFYRLHKNEKDLSFSKK-TVVNEIDDVTQEKVAEKAKLNMGN 181
E E +LK D+ RL K EKD F ++ T+ N+I D Q + E +
Sbjct: 139 EEERAVQLKHDRERAEVDLQLRL-KREKDALFEEEQTLQNKIQDELQRRSYETPQ----- 192
Query: 182 FNLIHSNKRKTNNSNLVNKRLRNSHHLTDCKKINAKIDVLENNVTIQK-SPKIELKHKD- 239
S+K+KTN+ + + DC I+ + D ++ VT + P + H +
Sbjct: 193 ----SSSKKKTNSKETTSLETLPTSIYFDC-SISVR-DCHDSLVTFNRVLPLYTISHSNL 246
Query: 240 -NVELQKRLKTDIDIVDC 256
+ L K +I + DC
Sbjct: 247 STLTLVKPESKEISLQDC 264
>SPBC18E5.13 ||SPBC23G7.03|translation initiation factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 27.5 bits (58), Expect = 2.5
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 118 VCYAPEMETVNELKEKLIERRKDVFYRLHKNEKDLSFSKKTVVNEIDDVTQEKVAEKAKL 177
+C +++L+E R ++ HKN+ + + +++D+ ++ + K L
Sbjct: 108 ICSIISYTELSKLRENQSSRLREAEKSKHKNKTRTRYVLFSWRTDVNDIERKLKSVKDFL 167
Query: 178 NMGNFNLIHSNKRKTNNSNLVNKRLRNS 205
GN IH +K S V++ +R+S
Sbjct: 168 QDGNIVEIHVQNKK--RSQPVSQEVRDS 193
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 27.1 bits (57), Expect = 3.3
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 147 KNEKDLSFSKKTVVNEID-DVTQEKVAEKAK-LNMGNFNLIHSNKRKTNNSNLVNKRLRN 204
KN K+ SK + +E DV +E V++ +K L N +S KR+ NNS+ V N
Sbjct: 104 KNSKE-KISKSSKQDEHKTDVHKESVSKLSKNLESRNNRDENSAKREKNNSHQVEADTNN 162
Query: 205 SHHLTDCKKINAKIDVLENNVTIQKSPK 232
+ + + + ++ T++K K
Sbjct: 163 ATEMVSSNAKKSVYPLYYDSATVKKGLK 190
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 27.1 bits (57), Expect = 3.3
Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Query: 100 RIAKKYLDCKNYYGGVLHVCYAPEMETVNELKEK--LIERRKDVFYRLHKNEKDLSFSKK 157
++ ++YL +N+ + + T NE+K L E D + + + S +K
Sbjct: 810 QLKQEYLTKRNFESKLKSSAVSSRKPTFNEVKPANLLAEDLSDNEDDIDRKQGLFSLAK- 868
Query: 158 TVVNEIDDVTQEKVAEKAKLNMGNFNLIHSNKRKTNNSNLVNKRLRNSHHLTDCKK 213
N+I ++ Q++ + L+ + S R N N+ N + R +TD K
Sbjct: 869 --ANKIPEIRQQERRQVQLLSNSTIKMHPSQIRMMTNRNVANVKARLFPSMTDFYK 922
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 27.1 bits (57), Expect = 3.3
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 184 LIHSNKRKTNNSNLVNKRLRNSHHLTDCKKINAKIDVLENNVTIQKSPKIELK-HKDNVE 242
L+HS + N S++ NK+ + H T C I+ DV N+++ + L ++ +
Sbjct: 1077 LLHSQPIQ-NVSDVNNKKDEDDHEQTSCLIISGIADVFSENMSLLLNVNGILDVLEEAFQ 1135
Query: 243 LQKRLKTDIDIVDCTS 258
L RL +DI C S
Sbjct: 1136 LMLRLHSDIYPKICIS 1151
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 27.1 bits (57), Expect = 3.3
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 96 IQSARIAKKYLDCKNYYGGVLHVCYAPEMETVNELKEKLIERRKDVFYRLHKNEKDLSFS 155
I + + KK + N Y L A E + +LK + +ERR+ + + K+L+
Sbjct: 1054 ITTVQTLKKQKEFANQYDSTL---LAQAQEKLEKLKVE-VERRRRLLSEKEERRKELAIK 1109
Query: 156 KKTVVNEIDDVTQEKVAEK 174
+ V N D+ AE+
Sbjct: 1110 IEQVTNSCSDLELRTNAEQ 1128
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 36 KVYTVNNESTHLLVFGVPSINLRQETKSLVQRYGAIKKFNLTKEYECEI 84
KV V N + ++ P+ N R+ ++ YGA + +T +YE +I
Sbjct: 607 KVIKVKNITAYIQEIRPPNFNPRKRYPTVFHLYGAPQSALVTGKYEMDI 655
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 4.3
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 20/150 (13%)
Query: 130 LKEKLIERRKDVFYRLHKNEKDLSFSK-KTVVNEIDDVTQEKVAEKAKLNMGNFNLIHSN 188
LKEK+ + K+ L K E L+F + K + + + +EK +K L M + +
Sbjct: 227 LKEKIDKLNKE----LEKVEPQLTFLRSKNSIEKPRNFRREKFLKKF-LAMQK-EIKYLR 280
Query: 189 KRKTNNSNLVNKRLRNSHHLTDCKKINAKIDVLENNVTIQKSPKIELKHKDNVELQKRLK 248
KRK + N + + + +N+K ++N T Q +P L + ++ + +
Sbjct: 281 KRKLQIRKIPNYKYSD-------RSLNSKTPKSQDNWTTQVTPSSLLGVSEVSKVLQLKQ 333
Query: 249 TDIDIVDCTS------TERETITNINEALN 272
+DI + +E+ TI+N+N LN
Sbjct: 334 VQVDITELVKIPKNPFSEKLTISNVNRYLN 363
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 26.6 bits (56), Expect = 4.3
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 148 NEKDLSFSKKTVVNEIDDVTQEKVAEKAKLNMGNF--NLIHSNKRKTNNS-NLVNKRLRN 204
N+++ + + + ++ E+ AE ++ N +L++ TN N N
Sbjct: 453 NQEETTSGEAVTKSTVESSANEEEAEPNEIIEENAVKSLLNQEGPATNEEVEKNNANSEN 512
Query: 205 SHHLTDCKKINAKIDVLENNVTIQKSP 231
++ LTD K I A +D EN+ + SP
Sbjct: 513 ANGLTDEKIIEAPLDTKENSDDDKPSP 539
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 26.2 bits (55), Expect = 5.7
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 123 EMETVNELKEKLIERRKDVFYRLHKNEKDLSFSKKTVVNEIDDVTQEKVAEKAKLNMGNF 182
E+E++N+ ++ ER + K + D+S + V E + Q K K+ N
Sbjct: 831 ELESLNQRFTEISERIPSAELEISKLQLDVSACDRLVAGEERRILQLKSDLKSIRNNNER 890
Query: 183 NLIHSNKRKTNNSNLVNKRLRNSHHLTDCKKINAKI-DVLENNVTIQKSPKIELKHK 238
NK + + + N +T+ K + KI ++ IQKS K++ H+
Sbjct: 891 KRNLQNKISNMDKEVEAININNEGLVTEIKTLQDKIMEIGGIRYRIQKS-KVDDLHE 946
>SPAC19B12.02c
|||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 18 ELCTTRLPYRQGRKLTAVKVYTVNNESTH 46
+ C+ +PY Q + A++VY VN H
Sbjct: 68 DACSRDVPYFQELSVNAIRVYAVNASLDH 96
>SPBC215.03c |csn1||COP9/signalosome complex subunit
Csn1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 422
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 203 RNSHHLTDCKKINAKIDVLENNVTIQKSPKIE 234
+N + + KK+N K+D L+ V I+ S + E
Sbjct: 340 KNLLEIIEAKKLNGKVDSLQKRVYIEPSSEPE 371
>SPAC20G8.01 |cdc17||ATP-dependent DNA ligase
Cdc17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 768
Score = 25.8 bits (54), Expect = 7.6
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 112 YGGVLHVCYAPEMETVNELKEKLIERRKDVFYRLHKNEKDLSFSKK 157
YG L CY P+ ETV + + ++ + KD+ SKK
Sbjct: 624 YGAFLLGCYDPDTETVQSICKLGTGFSEEHLETFYNQLKDIVISKK 669
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.8 bits (54), Expect = 7.6
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 199 NKRLRNSHHLTDCKKINAKI-------DVLENNVTIQKS--PKIELKHKDNVELQKRLKT 249
NK RN HH++D +N+ I D N++T Q++ P++ N+ + + +T
Sbjct: 344 NKSNRNGHHISD-PNLNSSISLKFAPEDTAHNSLTSQENVGPQVTTTSLSNMTVAESPRT 402
Query: 250 DIDIVDCTSTERETITNINE 269
D + ++TN NE
Sbjct: 403 DTP-REINGLVDSSVTNGNE 421
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 25.8 bits (54), Expect = 7.6
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 127 VNELKEKLIERRKDVFYRLHKNEKDLSFSKKTVVNEIDDVTQEKVAE-KAKLNMGNFNLI 185
+ K+ LI + K L K K+L+ KKTV + + + V + +A ++ G ++
Sbjct: 69 IRSSKQTLINKVKAQDELLKKKVKELTAMKKTVPFKSEVELDKHVKQLQAAVDSGTLKIV 128
Query: 186 HSNK--RKTNNSNLVNKRLRNSHHL-TDCKKINAKIDVLENNVTIQKSPKIELK 236
K R+ + N K + L T I +++ L + + +S K+ K
Sbjct: 129 DEKKYLREISQCNRTRKSFVELNALQTSIDTIRNELNELRDQLNDSESKKLSDK 182
>SPAC18G6.06 |||U3 snoRNP-associated protein
Utp11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 120 YAPEMETVNELKEKLIERRKDVFYR--LHKNEKD 151
Y + + + L+EK +ER D FY HK K+
Sbjct: 42 YKTKQKKLKRLREKALERNPDEFYHEMTHKKTKN 75
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.8 bits (54), Expect = 7.6
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 9/121 (7%)
Query: 159 VVNEIDDVTQEKVAEKAKLNMGNFNLIHSNKRKTNNSNLVNKRLR----NSHHLTDC--K 212
+V+E DV+ E + +N G I + K K + N + +L N H + K
Sbjct: 12 LVHEFLDVSFEDIKPLVSVN-GFAVFISAIKTKVKDINALKDQLVLQEVNHEHKENVLTK 70
Query: 213 KINAKIDVLE--NNVTIQKSPKIELKHKDNVELQKRLKTDIDIVDCTSTERETITNINEA 270
KIN L+ NN + I + +N L+ L+ D +TE +++ N
Sbjct: 71 KINFLEQQLQSSNNQAEESRNLISVLRNENESLKTNLENQNKRFDALTTENQSLRRANSE 130
Query: 271 L 271
L
Sbjct: 131 L 131
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 6 EKTSLLPHHVQQELCTTRLPY 26
EK L+ H Q ++CT LPY
Sbjct: 2567 EKAQLVYEHAQLKVCTGSLPY 2587
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 213 KINAKIDVLENNVTIQKSPKIELKHKDNVELQK 245
++N++ +LEN++ + KS L H+ + L+K
Sbjct: 38 ELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEK 70
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.131 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,450,463
Number of Sequences: 5004
Number of extensions: 63536
Number of successful extensions: 224
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 202
Number of HSP's gapped (non-prelim): 43
length of query: 300
length of database: 2,362,478
effective HSP length: 72
effective length of query: 228
effective length of database: 2,002,190
effective search space: 456499320
effective search space used: 456499320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 54 (25.8 bits)
- SilkBase 1999-2023 -