GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001705-TA|BGIBMGA001705-PA|undefined
         (300 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    27   0.65 
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    26   1.1  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    26   1.1  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.6  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   3.4  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    24   4.6  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   4.6  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    24   6.0  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 27.1 bits (57), Expect = 0.65
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 2/83 (2%)

Query: 140 DVFYRLHKNEKDLSFSKKTVVNEIDDVTQEKVAEKAKLNMGNFNLIHSNKRKTNNSNLVN 199
           D   R+ ++ +D          E   ++  KV +KA +  G    + S +       +++
Sbjct: 716 DAVGRIDRSMRDAKLVIAHAKTEFIVISSHKVHQKASIMAGTVQ-VESTRSLKYLGVVID 774

Query: 200 KRLRNSHHLTD-CKKINAKIDVL 221
            RL+   HL + CKK+   I+ L
Sbjct: 775 DRLKFKSHLEEACKKVMKAINAL 797


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 136 ERRKDVFYRLHKNEKDLSFSKKTVVNEIDDV 166
           ER++   ++ HK + DL++    VV  + DV
Sbjct: 174 ERKQFYLHQFHKKQPDLNYRNPAVVQAMKDV 204


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 190 RKTNNSNLVNKRLRNSHHLTDCKKINAKIDVLENNVTIQKSPKIELKHKDNVELQKRL 247
           R T+++ L  KR  +   + +C KI  +   +EN++   +    EL+ +   +LQ++L
Sbjct: 607 RSTDHALLAQKRQEHQRLVRECDKIRNQRGQIENSIKELQERCAELREQKR-DLQEQL 663


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 129  ELKEKLIERRKDVFYRLHKNEKDLSFSKKTVVNEIDDVTQEKVAEKAKLNMGNFNLIHSN 188
            EL++ LI+ +       H N  DL   K+    EI  + +E+   K + ++  F+L H++
Sbjct: 1760 ELEQTLIDAKIPA---CHWNLADLPDIKRLSCAEICQLVKERARAKRREDVDRFDLQHAD 1816

Query: 189  KRKTNNSN 196
                 + N
Sbjct: 1817 SNGGEDGN 1824


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/44 (27%), Positives = 24/44 (54%)

Query: 127  VNELKEKLIERRKDVFYRLHKNEKDLSFSKKTVVNEIDDVTQEK 170
            VN+    L+ER ++ +  + + +K +   KK +   I D+ +EK
Sbjct: 981  VNQKAMVLLEREEEQYKEVMRRKKVVEDDKKKIQAIITDLDEEK 1024


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 20  CTTRLPYRQGRKLTAVKV 37
           CT   PY QG +LTA ++
Sbjct: 192 CTETRPYNQGARLTAYEL 209


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 239 DNVELQKRLKTDIDIVDCTSTERETITNINEALNYNKFGNEII 281
           DN+E+ K  K +++I      +  +ITN+   +      NE +
Sbjct: 414 DNIEIGKEYKFNVEIHLLEYPKDPSITNVTVRIEEKLISNEAV 456


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 140 DVFYRLHKNEKDLSFSKKTVVNEIDDVTQEKVAEKAKLN 178
           D F+ +++NE D+  S       +DD+  +   EK   N
Sbjct: 573 DGFHAINENEFDIFHSLGLFARTLDDILFDSANEKTGRN 611


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.131    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 299,364
Number of Sequences: 2123
Number of extensions: 12046
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 8
length of query: 300
length of database: 516,269
effective HSP length: 64
effective length of query: 236
effective length of database: 380,397
effective search space: 89773692
effective search space used: 89773692
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 48 (23.4 bits)