Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001704-TA|BGIBMGA001704-PA|IPR007087|Zinc finger,
C2H2-type
(497 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 79 1e-15
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 70 9e-13
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 62 2e-10
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 60 7e-10
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 60 9e-10
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 58 2e-09
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 57 5e-09
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 54 6e-08
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 52 1e-07
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 49 1e-06
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 48 2e-06
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 43 9e-05
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 39 0.001
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 38 0.004
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 33 0.091
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 30 0.64
SPBC2F12.11c |rep2||transcriptional activator Rep2|Schizosacchar... 30 0.64
SPAC24H6.02c |||TIM23 translocase complex subunit Tim15|Schizosa... 30 0.85
SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein] reductase|Schiz... 29 1.5
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 28 2.6
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 28 3.4
SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase |Schizos... 28 3.4
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 27 7.9
SPAC1805.03c |trm13||tRNA 2'-O-methyltransferase Trm13 |Schizosa... 27 7.9
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 79.4 bits (187), Expect = 1e-15
Identities = 46/130 (35%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 367 VRPAETEYVC--EMCGTRCSSAVSLLNHQRTHTGEKPYQC--PDCPKRFSVSQGLRIHIR 422
+R A+ + C E CG + S L H RTH+ E+P+ C C K F L+IH R
Sbjct: 16 LRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKR 75
Query: 423 THTGERPFKC--TNCPKAFKNKAALNRHNRVHTGVRPYAC--PHCLKAFSQSNSMKLHVS 478
HT +PF C C F + L RH VH +PYAC C + FS+ ++ H+S
Sbjct: 76 CHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHIS 135
Query: 479 TVHLKMPAPY 488
H + PY
Sbjct: 136 ACHTHL-LPY 144
Score = 73.3 bits (172), Expect = 7e-14
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 390 LNHQRTHTGEKPYQCP--DCPKRFSVSQGLRIHIRTHTGERPFKC--TNCPKAFKNKAAL 445
+ + + +K + CP +C K++S L H+RTH+ ERPF C T C KAF K+ L
Sbjct: 11 IESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHL 70
Query: 446 NRHNRVHTGVRPYACPH--CLKAFSQSNSMKLHVSTVHLKMPAPY 488
H R HT V+P++C + C F ++ H+ VH K P PY
Sbjct: 71 KIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIE-VHRK-PKPY 113
Score = 66.1 bits (154), Expect = 1e-11
Identities = 70/253 (27%), Positives = 107/253 (42%), Gaps = 33/253 (13%)
Query: 246 CPL--CHKRFLGRLGLKMHMKRAHGECKKSLEEHVCD--GCDVNFNSEDALERHRSVLSD 301
CP C K++ L+ H++ E VCD GC F + L+ H+ ++
Sbjct: 25 CPYEECGKKYSRPSLLEQHLRTHSNE-----RPFVCDYTGCSKAFYRKSHLKIHKRCHTN 79
Query: 302 VSCQDLRSCAECGFGFQTEELLQEHVDSVHAVDETAKCS--KCDKNFANKRTLSKHIQRY 359
V C F T++ L+ H++ VH + C+ CD+ F+ + L HI
Sbjct: 80 VKPFSCHYDG-CDAQFYTQQHLERHIE-VHRKPKPYACTWEGCDECFSKHQQLRSHISAC 137
Query: 360 HLGNLRAVRPAETEYVCEMCGTRCSSAVSLLNH-QRTHTGEKPYQCP--DCP--KRFSVS 414
H L P Y + C R ++ L NH R H Y CP C + F
Sbjct: 138 HTHLL----PYPCTY--QDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKW 191
Query: 415 QGLRIHIRTHTGERPFKCTNCPKAFKNKAALNRHNRVHTGV----RPYACPH--CLKAFS 468
L+ HIR P C+ C + FK A L H +H + Y CP C K+F+
Sbjct: 192 SQLQNHIRE--AHVP-SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFT 248
Query: 469 QSNSMKLHVSTVH 481
+S+++K H+S +H
Sbjct: 249 RSSALKKHISVIH 261
Score = 52.8 bits (121), Expect = 1e-07
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 31/244 (12%)
Query: 249 CHKRFLGRLGLKMHMKRAHGEC-KKSLEEHVCDGCDVNFNSEDALERHRSVLSDVSCQDL 307
C RF + L+ H+ RAH + S C G + F L+ H + +
Sbjct: 151 CELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHE-GFEKWSQLQNH------IREAHV 203
Query: 308 RSCAECGFGFQTEELLQEHVDSVHAVDETAK---CSK--CDKNFANKRTLSKHIQRYHLG 362
SC+ CG F+T L+ HV E K C C K+F L KHI H G
Sbjct: 204 PSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEG 263
Query: 363 NLRAVRPAETEYVCEMCGTRCSSAVSLLNHQRTHT---GEKPYQCPDCPKRFSVSQGLRI 419
N+ + C+ CGT+ L H T KPY +C + +G+ I
Sbjct: 264 NM--------AFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPY-INECGIKHDGIEGVAI 314
Query: 420 HIRTHTGERPFKCTNCPKAFKNKAALNRHNRVHTGVRPYAC--PHCLKAFSQSNSMKLHV 477
H + ++ K N+ + H + R Y+C P C F + M H+
Sbjct: 315 HDQKEKELSSNLVSDVAKKIINE--VTGHG--YKEAREYSCSFPECNYRFKRLYDMHRHL 370
Query: 478 STVH 481
++ H
Sbjct: 371 NSHH 374
Score = 41.5 bits (93), Expect = 3e-04
Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 14/136 (10%)
Query: 227 SHVTRSLHRAREHRASHGGCPLCHKRFLGRLGLKMHMKRAHGECKKSLEEHVCDGCDVNF 286
+HV R+ + + H C + H+ F L+ H++ AH C C F
Sbjct: 163 NHVNRAHEKIISYSCPHESC-VGHEGFEKWSQLQNHIREAHVPS--------CSICGRQF 213
Query: 287 NSEDALERHRSVLSDVSCQDLRS--CAE--CGFGFQTEELLQEHVDSVHAVDETAKCSKC 342
+ L RH VL + ++ ++ C C F L++H+ +H + C C
Sbjct: 214 KTAAHL-RHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSC 272
Query: 343 DKNFANKRTLSKHIQR 358
F K L +H++R
Sbjct: 273 GTKFGYKHMLQRHLER 288
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 69.7 bits (163), Expect = 9e-13
Identities = 26/70 (37%), Positives = 45/70 (64%)
Query: 407 CPKRFSVSQGLRIHIRTHTGERPFKCTNCPKAFKNKAALNRHNRVHTGVRPYACPHCLKA 466
C KRF+ + L+ H+ THT RPF+C+ C K+F + RH ++HTG++ +AC C +
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 467 FSQSNSMKLH 476
F++ +++ H
Sbjct: 637 FARMDALNRH 646
Score = 69.3 bits (162), Expect = 1e-12
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 370 AETEYVCEM--CGTRCSSAVSLLNHQRTHTGEKPYQCPDCPKRFSVSQGLRIHIRTHTGE 427
++ YVC C R + A +L +H THT +P+QC C K F+ R H + HTG
Sbjct: 566 SQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGI 625
Query: 428 RPFKCTNCPKAFKNKAALNRHNRVHTG 454
+ F C C + F ALNRH + G
Sbjct: 626 KAFACVTCNQRFARMDALNRHYKSEVG 652
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 348 NKRTLSKHIQRYHLGNLRAVRPAETEYVCEMCGTRCSSAVSLLNHQRTHTGEKPYQCPDC 407
NKR + + H+ RP + C +C + H++ HTG K + C C
Sbjct: 578 NKRFTRAYNLKSHMNTHTNYRP----FQCSICKKSFARQHDKRRHEQLHTGIKAFACVTC 633
Query: 408 PKRFSVSQGLRIHIRTHTGE 427
+RF+ L H ++ G+
Sbjct: 634 NQRFARMDALNRHYKSEVGQ 653
Score = 35.9 bits (79), Expect = 0.013
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 14/107 (13%)
Query: 215 SAHERHFLC--AHCSHVTRSLHRAREHRASHGG-----CPLCHKRFLGRLGLKMHMKRAH 267
S + +++C A C+ + + H +H C +C K F + H KR H
Sbjct: 564 SKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFA-----RQHDKRRH 618
Query: 268 GECKKSLEEHVCDGCDVNFNSEDALERHRSVLSDVSCQDLRSCAECG 314
+ ++ C C+ F DAL RH S+V LR+ E G
Sbjct: 619 EQLHTGIKAFACVTCNQRFARMDALNRHYK--SEVGQNCLRTATERG 663
Score = 29.9 bits (64), Expect = 0.85
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 311 AECGFGFQTEELLQEHVDSVHAVDETAKCSKCDKNFANKRTLSKHIQRYHLGNLRAVRPA 370
A C F L+ H+++ H +CS C K+FA + +H ++ H G ++A
Sbjct: 575 AGCNKRFTRAYNLKSHMNT-HTNYRPFQCSICKKSFARQHDKRRH-EQLHTG-IKA---- 627
Query: 371 ETEYVCEMCGTRCSSAVSLLNHQRTHTGE 399
+ C C R + +L H ++ G+
Sbjct: 628 ---FACVTCNQRFARMDALNRHYKSEVGQ 653
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 62.1 bits (144), Expect = 2e-10
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 407 CPKRFSVSQGLRIHIRTHTGERPFKCTNCPKAFKNKAALNRHNRVHTGVRPYACPHCLKA 466
C KR + + HI+TH +RP++C C F L RH R+H RPY C CLK
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKR 508
Query: 467 FSQSNSMKLH 476
F++ +++ H
Sbjct: 509 FNRLDALNRH 518
Score = 59.3 bits (137), Expect = 1e-09
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 370 AETEYVC--EMCGTRCSSAVSLLNHQRTHTGEKPYQCPDCPKRFSVSQGLRIHIRTHTGE 427
A+ +YVC C R + ++ +H +TH ++PY+C C F L+ H+R H
Sbjct: 439 ADGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENG 498
Query: 428 RPFKCTNCPKAFKNKAALNRHNR 450
RP+ C C K F ALNRH +
Sbjct: 499 RPYVC-ECLKRFNRLDALNRHKQ 520
Score = 39.9 bits (89), Expect = 8e-04
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 342 CDKNFANKRTLSKHIQRYHLGNLRAVRPAETEYVCEMCGTRCSSAVSLLNHQRTHTGEKP 401
C+K A K + HIQ HL + RP Y C++C L H R H +P
Sbjct: 450 CNKRIARKYNVESHIQT-HLSD----RP----YRCDLCKAGFVRHHDLKRHLRIHENGRP 500
Query: 402 YQCPDCPKRFSVSQGLRIH 420
Y C +C KRF+ L H
Sbjct: 501 YVC-ECLKRFNRLDALNRH 518
Score = 31.9 bits (69), Expect = 0.21
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 435 CPKAFKNKAALNRHNRVHTGVRPYACPHCLKAFSQSNSMKLHV 477
C K K + H + H RPY C C F + + +K H+
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHL 492
Score = 26.6 bits (56), Expect = 7.9
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 323 LQEHVDSVHAVDETAKCSKCDKNFANKRTLSKHIQRYHLGNLRAVRPAETEYVCEMCGTR 382
++ H+ + H D +C C F L +H++ + G RP YVCE C R
Sbjct: 460 VESHIQT-HLSDRPYRCDLCKAGFVRHHDLKRHLRIHENG-----RP----YVCE-CLKR 508
Query: 383 CSSAVSLLNHQR 394
+ +L H++
Sbjct: 509 FNRLDALNRHKQ 520
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 60.1 bits (139), Expect = 7e-10
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 398 GEKPYQCPDCPKRFSVSQGLRIHIRT-HTGERPFKCTNCPKAFKNKAALNRHNRVHTGVR 456
G K + CP+C K+F S+ LR HIR+ HT E+PF C C K F + L +H R+H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLHVNAS 477
Query: 457 P-YAC 460
P AC
Sbjct: 478 PRLAC 482
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 9/63 (14%)
Query: 339 CSKCDKNFANKRTLSKHIQRYHLGNLRAVRPAETEYVCEMCGTRCSSAVSLLNHQRTHTG 398
C +C K F KR S+H++R+ +R++ +E +VC +CG R S +L H+R H
Sbjct: 425 CPECSKKF--KR--SEHLRRH----IRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVN 475
Query: 399 EKP 401
P
Sbjct: 476 ASP 478
Score = 36.3 bits (80), Expect = 0.010
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 310 CAECGFGFQTEELLQEHVDSVHAVDETAKCSKCDKNFANKRTLSKHIQRYHL 361
C EC F+ E L+ H+ S+H ++ C C K F+ + L +H +R H+
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQH-ERLHV 474
Score = 31.5 bits (68), Expect = 0.28
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 437 KAFKNKAALNRHNRV--HTGVRPYACPHCLKAFSQSNSMKLHVSTVH 481
K K + NR V G + + CP C K F +S ++ H+ ++H
Sbjct: 400 KRRKRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLH 446
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Query: 246 CPLCHKRFLGRLGLKMHMKRAHGECKKSLEEHVCDGCDVNFNSEDALERH 295
CP C K+F L+ H++ H S + VC C F+ D L +H
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLH----TSEKPFVCI-CGKRFSRRDNLRQH 469
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 59.7 bits (138), Expect = 9e-10
Identities = 27/56 (48%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 400 KPYQCPDCPKRFSVSQGLRIHIRTHTGERPFKCT--NCPKAFKNKAALNRHNRVHT 453
+PY+CP C K F + HIRTHTGE+P CT C K F L RH R+HT
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 51.6 bits (118), Expect = 2e-07
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 428 RPFKCTNCPKAFKNKAALNRHNRVHTGVRPYAC--PHCLKAFSQSNSMKLH 476
RP+KC C KAF RH R HTG +P+ C P C K FS+S+ + H
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
Score = 50.4 bits (115), Expect = 6e-07
Identities = 29/76 (38%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 370 AETEYVCEMCGTRCSSAVSLLNHQRTHTGEKPYQC--PDCPKRFSVSQGLRIHIRTHTGE 427
A Y C +C H RTHTGEKP+ C P C KRFS S L H R HT
Sbjct: 22 APRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNA 81
Query: 428 RPFKCTNCPKAFKNKA 443
+ A N A
Sbjct: 82 NSRRNAAAAAAANNSA 97
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 456 RPYACPHCLKAFSQSNSMKLHVST 479
RPY CP C KAF + H+ T
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRT 47
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 58.4 bits (135), Expect = 2e-09
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 417 LRIHIRTHT-GERPFKCT--NCPKAFKNKAALNRHNRVHTGVRPYACPHCLKAFSQSNSM 473
L+ R H G+ F CT +CPK+F K L RH R H V+ ++C C +AF++S+ +
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 474 KLHVSTVHLKMPAPYRNRRKNNS 496
HV +HL+ R N S
Sbjct: 72 NRHVQQMHLQKQNLSERRMLNAS 94
Score = 53.2 bits (122), Expect = 8e-08
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 389 LLNHQRTHT-GEKPYQC--PDCPKRFSVSQGLRIHIRTHTGERPFKCTNCPKAFKNKAAL 445
L R H G+ + C PDCPK F+ + LR H RTH + F C+ C +AF L
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 446 NRH 448
NRH
Sbjct: 72 NRH 74
Score = 35.9 bits (79), Expect = 0.013
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 312 ECGFGFQTEELLQEHVDSVHAVDETAKCSKCDKNFANKRTLSKHIQRYHL 361
+C F +E L+ H + H + CS C++ FA L++H+Q+ HL
Sbjct: 32 DCPKSFTRKEHLRRH-ERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHL 80
Score = 33.1 bits (72), Expect = 0.091
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 13/132 (9%)
Query: 365 RAVRPAETEYVCEM--CGTRCSSAVSLLNHQRTHTGEKPYQCPDCPKRFSVSQGLRIHI- 421
RA R + + C C + L H+RTH K + C C + F+ S L H+
Sbjct: 17 RAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Query: 422 -----RTHTGERPFKCTNCPKAFKNKAALNRHNRVH-TGVRPYACPHCLKAFSQSNSMKL 475
+ + ER +C F + H+ V+ R + H L F+ ++
Sbjct: 77 QMHLQKQNLSERRMLNASCFLGF----CVLAHDYVNLINARHFMIEHFLSLFAFCRTILF 132
Query: 476 HVSTVHLKMPAP 487
+ T L +P P
Sbjct: 133 SLLTSFLLVPPP 144
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 282 CDVNFNSEDALERHRSVLSDVSCQDLRSCAECGFGFQTEELLQEHVDSVH 331
C +F ++ L RH +V SC+ C F ++L HV +H
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAF---SCSFCNRAFARSDVLNRHVQQMH 79
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 57.2 bits (132), Expect = 5e-09
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 402 YQCPDCPKRFSVSQGLRIHIRTHTGERPFKC--TNCPKAFKNKAALNRHNRVH 452
Y+C +C + FS L+IH +HTGERPF C C KAF ++ + RH R+H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 48.4 bits (110), Expect = 2e-06
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 347 ANKRTLSKHIQRYHLGNLRAVRPAETEYVCEMCGTRCSSAVSLLNHQRTHTGEKPYQC-- 404
+ + + S+ I + H G+ A Y C C S SL H +HTGE+P+ C
Sbjct: 441 SRRHSTSRKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDY 500
Query: 405 PDCPKRFSVSQGLRIHIRTH 424
C K F+V +R H R H
Sbjct: 501 AGCGKAFNVRSNMRRHQRIH 520
Score = 44.4 bits (100), Expect = 4e-05
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 430 FKCTNCPKAFKNKAALNRHNRVHTGVRPYACPH--CLKAFSQSNSMKLH 476
++CT C + F ++L H HTG RP+ C + C KAF+ ++M+ H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRH 516
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 53.6 bits (123), Expect = 6e-08
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 400 KPYQCPDCPKRFSVSQGLRIHIRTHTGERPFKCT--NCPKAFKNKAALNRHNRVH 452
K Y+CP C + F + HIR+HTGE+PF+C+ +C K F + L RH R H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 47.6 bits (108), Expect = 4e-06
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 374 YVCEMCGTRCSSAVSLLNHQRTHTGEKPYQC--PDCPKRFSVSQGLRIHIRTH 424
Y C C + H R+HTGEKP++C P C KRF+ L H+RTH
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 428 RPFKCTNCPKAFKNKAALNRHNRVHTGVRPYAC--PHCLKAFSQSNSMKLHVSTVHLK 483
+ ++C C + F + RH R HTG +P+ C P C K F++ + + HV T HL+
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRT-HLR 58
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 52.4 bits (120), Expect = 1e-07
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 426 GERPFKCT--NCPKAFKNKAALNRHNRVHTGVRPYACPHCLKAFSQSNSMKLHVSTVHLK 483
G+ +KC C K+F K RH R HT + + CPHC +F++S+ + HV+ H+K
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVK 72
Score = 44.0 bits (99), Expect = 5e-05
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 398 GEKPYQCP--DCPKRFSVSQGLRIHIRTHTGERPFKCTNCPKAFKNKAALNRH-NRVH 452
G+ Y+C C K F+ + R H R+HT + F C +C +F LNRH N+ H
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
Score = 34.3 bits (75), Expect = 0.040
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 365 RAVRPAETEYVCEM--CGTRCSSAVSLLNHQRTHTGEKPYQCPDCPKRFSVSQGLRIHI 421
RA + + Y C+ C + H R+HT K + CP C F+ S L H+
Sbjct: 8 RAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 49.2 bits (112), Expect = 1e-06
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 400 KPYQCPDCPKRFSVSQGLRIHIRTHTGERPFKC-------TNCPKAFKNKAALNRH-NRV 451
K Y C C + F+ + L+ HIR+HT E+PF C T C + F + L RH ++
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 452 HTGVRPYACPHCLKAFSQSNSMKLHVSTVHL 482
H +P A + + VST +L
Sbjct: 128 HRNPQPRRRRRSTTALPNPSLSNVSVSTTNL 158
Score = 36.7 bits (81), Expect = 0.007
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 373 EYVCEMCGTRCSSAVSLLNHQRTHTGEKPYQCPD-------CPKRFSVSQGLRIH-IRTH 424
+YVCE C + L H R+HT EKP+ C + C ++FS L H + H
Sbjct: 69 QYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIH 128
Query: 425 TGERPFKCTNCPKAFKNKAALN 446
+P + A N + N
Sbjct: 129 RNPQPRRRRRSTTALPNPSLSN 150
Score = 29.1 bits (62), Expect = 1.5
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 272 KSLEEHVCDGCDVNFNSEDALERH-RSVLSD--VSCQDLRSC-AECGFGFQTEELLQEHV 327
+ ++++VC+ C F + L+RH RS ++ +C ++ CG F +LL H
Sbjct: 65 QKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQ 124
Query: 328 DSVH 331
+H
Sbjct: 125 QKIH 128
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 423 THTGERPFKCTNCPKAFKNKAALNRH-NRVHTGVRPYACPHCLKAFSQSNSMKLHV 477
T P T+ K + A + N V+ Y C C +AF++ +K H+
Sbjct: 34 TSNANTPSSVTSNSKPVASSTAAKKDPNAPPQKVKQYVCETCTRAFARLEHLKRHI 89
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 48.4 bits (110), Expect = 2e-06
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 360 HLGNLRAVRPAETEYVCEMCGTRCSSAVSLLNHQRTHTGEKPYQC--PDCPKRFSVSQGL 417
H+GN R E + C G +S +L+ H R+HTGEKP+ C P+C + F+ S L
Sbjct: 65 HIGNRRPKYTCEWDD-CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDAL 123
Query: 418 RIHIRT-HTGERPFKCTNCPKA 438
H+RT H + PKA
Sbjct: 124 AKHMRTVHEADTLRPSDPIPKA 145
Score = 41.9 bits (94), Expect = 2e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 9/70 (12%)
Query: 421 IRTHTGERPFKCT----NCPK---AFKNKAALNRHNRVHTGVRPYAC--PHCLKAFSQSN 471
I H G R K T +CP+ ++ AL H R HTG +P+ C P C ++F++S+
Sbjct: 62 ILDHIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSD 121
Query: 472 SMKLHVSTVH 481
++ H+ TVH
Sbjct: 122 ALAKHMRTVH 131
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 43.2 bits (97), Expect = 9e-05
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 427 ERPFKCTNCPKAFKNKAALNRHNRVHTGVRPYACPHCLKAFSQSNSMKLHVSTVH 481
+R F C C K F L RH H+ P CP+C + + +K H+ H
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 381 TRCSSAVSLLNHQRTHTGEKPYQCPDCPKRFSVSQGLRIHIRTHTGERPFKCTNCPKAFK 440
T SA L ++ + C C KRF+ + L H H+ P C C K
Sbjct: 10 TNVLSAKRKLTEPSLIDSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCK 69
Query: 441 NKAALNRH-NRVH 452
K L RH R H
Sbjct: 70 RKDLLKRHIQRFH 82
Score = 36.7 bits (81), Expect = 0.007
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 284 VNFNSEDALERHRSVL--SDVSCQDLRSCAECGFGFQTEELLQEHVDSVHAVDETAKCSK 341
V+ NS + L R + S + + + C +C F E L H + H+ E C
Sbjct: 5 VSENSTNVLSAKRKLTEPSLIDSKRVFPCDQCAKRFTRHENLTRH-KACHSKAEPIPCPY 63
Query: 342 CDKNFANKRTLSKHIQRYH 360
C+ K L +HIQR+H
Sbjct: 64 CEIKCKRKDLLKRHIQRFH 82
Score = 31.9 bits (69), Expect = 0.21
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 218 ERHFLCAHCS-----HVTRSLHRAREHRASHGGCPLCHKRFLGRLGLKMHMKRAHGECKK 272
+R F C C+ H + H+A +A CP C + + LK H++R H + K
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHND-KS 86
Query: 273 SLEEHVCDGCDVNFNSEDALERHRSVLSDVSCQDL 307
+EE D DV + + + VL D+
Sbjct: 87 VIEEGSKDVLDVKAAASQQEDNMKIVLPSFDAIDV 121
Score = 31.9 bits (69), Expect = 0.21
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 374 YVCEMCGTRCSSAVSLLNHQRTHTGEKPYQCPDCPKRFSVSQGLRIHIR 422
+ C+ C R + +L H+ H+ +P CP C + L+ HI+
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQ 79
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 39.1 bits (87), Expect = 0.001
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 265 RAHGECKKSLEEHVC--DGCDVNFNSEDALERHRSVLSDVSCQDLRSC--AECGFGFQTE 320
+A K E+ C +GC N +S + +H +L + C A C +E
Sbjct: 988 KAFNMLSKGYAEYRCQWEGCLANLHSLENFIKHVLLLHHPKSCSVVKCLWASCDMVLPSE 1047
Query: 321 EL---LQEHVDSVHAVDETAKCSKCDKNFANKRTLSKHIQRYHL 361
E L+ H++++ E + C KC F+N + KH+Q HL
Sbjct: 1048 EFEMHLRGHLNNIRLNCEVSNCKKC---FSNYEDMFKHLQHSHL 1088
Score = 26.6 bits (56), Expect = 7.9
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 140 MMLSEEEQLAEIQRRKESVNYKCSLYKCEKCYKGFMTDVTYTNHMIRHDPCSGAHECGIC 199
M+L EE ++ ++ C + C+KC+ + + H H P E I
Sbjct: 1042 MVLPSEEFEMHLRGHLNNIRLNCEVSNCKKCFSNYEDMFKHLQH--SHLPFKFTPESFI- 1098
Query: 200 GIRRASVRE 208
IR +V+E
Sbjct: 1099 KIRNGNVKE 1107
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 37.5 bits (83), Expect = 0.004
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 399 EKPYQCP--DCPKRFSVSQGLRIHIRTHTGERPFKCTNCPKAFKNKAALNRHNRVHTGVR 456
+KPY+CP +C K + GL+ H + H P T P ++ + + +
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYH-KLHGHCSPIT-TPTPAPIPHQGFVVEN-------K 397
Query: 457 PYACPHCLKAFSQSNSMKLHVSTVHLKM 484
PY C C K + N +K H + HL++
Sbjct: 398 PYRCEVCSKRYKNLNGLKYHRTHSHLQV 425
Score = 34.3 bits (75), Expect = 0.040
Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 21/95 (22%)
Query: 333 VDETAKCS--KCDKNFANKRTLSKHIQRYHLGNLRAVRPAETEYVCEMCGTRCSSAVSLL 390
VD+ KC CDK + N+ L H H + PA +
Sbjct: 346 VDKPYKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPAP------------------I 387
Query: 391 NHQRTHTGEKPYQCPDCPKRFSVSQGLRIHIRTHT 425
HQ KPY+C C KR+ GL+ H RTH+
Sbjct: 388 PHQGFVVENKPYRCEVCSKRYKNLNGLKYH-RTHS 421
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Query: 220 HFLCAHCSHVTRSLHRAREHRA-----SHGGCPLCHKRFLGRLGLKMHMKRAH 267
H L HCS +T H+ C +C KR+ GLK H +H
Sbjct: 370 HKLHGHCSPITTPTPAPIPHQGFVVENKPYRCEVCSKRYKNLNGLKYHRTHSH 422
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 33.1 bits (72), Expect = 0.091
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 147 QLAEIQRRKESVNYKCSLYK-CEKCYKGFMTDVTYTNHM 184
++ IQ++ E V K Y+ CE C K F ++ Y++HM
Sbjct: 51 KILSIQKQNEEVQKKAEFYQNCEVCNKKFYSEGAYSSHM 89
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 30.3 bits (65), Expect = 0.64
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 156 ESVNYKCSLYKCEKCYKGFMTDVTYTNHMIRHDPCSGAHE 195
+ +N + L + EKC K D H ++H P S AH+
Sbjct: 401 KKINDEGVLKQLEKCVKLVSLDTANEKHFLKHTPNSAAHQ 440
>SPBC2F12.11c |rep2||transcriptional activator
Rep2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 219
Score = 30.3 bits (65), Expect = 0.64
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 343 DKNFANKRTLSKHIQRYHLGNLRAVRPAETEYVCEMCGTRCSSAVSLLNHQRTHTGEKPY 402
D A K L + ++R +A+RP +C C T + + +L+ H+ T + P+
Sbjct: 145 DARDAIKSALRRRMRRREGRVQKALRPTPN-LICSKCNTTFNHSTALMMHEATCLNQVPF 203
Query: 403 QCPD 406
+ D
Sbjct: 204 KLSD 207
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 259 LKMHMKRAHGECKKSLEEH---VCDGCDVNFNSEDALERHRS 297
L+ M+R G +K+L +C C+ FN AL H +
Sbjct: 154 LRRRMRRREGRVQKALRPTPNLICSKCNTTFNHSTALMMHEA 195
>SPAC24H6.02c |||TIM23 translocase complex subunit
Tim15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 175
Score = 29.9 bits (64), Expect = 0.85
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 374 YVCEMCGTRCSSAVSLLNHQRTHTGEKPYQCPDCPKRFSVSQGLRI 419
+ C +C TR + S Q H G QCP C R ++ L+I
Sbjct: 80 FTCTVCNTRSNHNFS---KQAYHNGTVLVQCPKCKNRHLMADHLKI 122
>SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein]
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 29.1 bits (62), Expect = 1.5
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 341 KCDKNFANKRTLSKHIQRYHLGNLRAVRPAETEYVCEMCGTRCSS 385
KC KN N R L+ I + ++ V P++ + ++C ++ S+
Sbjct: 45 KCSKNQVNVRFLASPINPSDINQIQGVYPSKPPFTNDVCSSKPSA 89
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 336 TAKCSKCDKNFANKRTLSKHIQRYH 360
T +C KCD F + L+ H + YH
Sbjct: 138 TFRCDKCDMMFVKQSGLTNHKRTYH 162
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 59 DRETYHLNTPLAVHTLHSMSLSTQVDYIKEEYDNV 93
DR+ Y + + V+ L +SLS+ V+ +KEE +N+
Sbjct: 43 DRKGYDVLIKVFVNKLPEISLSSIVNLLKEEQENI 77
>SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 27.9 bits (59), Expect = 3.4
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 60 RETYHLNTPLAVHTLHSMSL-STQVDYIKEEYDNVENCAYLDDFKVMS 106
R++Y +AVH L S+ L ST ++ K+ Y++ NC+ L + + +S
Sbjct: 318 RQSYLRIDAIAVHKLKSIPLLSTVSNWFKKMYEHRANCSALIETERLS 365
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 26.6 bits (56), Expect = 7.9
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 124 SKSYDNVKLFEEDIHVM--MLSEEEQLAEIQRRKESVNYKCSLYKCEKCYKGFMTD 177
SKS + E + + +L E ++L E R KE +N + LY + Y MT+
Sbjct: 873 SKSKQKISYLESQLEGLHELLRESQRLCE-GRTKELLNSQQKLYDLKHSYSSVMTE 927
>SPAC1805.03c |trm13||tRNA 2'-O-methyltransferase Trm13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 246 CPLCHKRFLGRLGLKMHMKRAHGECKKSLEEHVCDGCDVNFNSEDALERHRSVLSDVSCQ 305
CP HK + R L+ H+KR + + + + +++ S DA E + D+S +
Sbjct: 57 CPYDHKHTIVRHRLEYHLKRCNARPVERTDPYYKKDINIS-TSTDASESSSFEIVDLSKE 115
Query: 306 DL 307
+L
Sbjct: 116 EL 117
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.133 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,264,305
Number of Sequences: 5004
Number of extensions: 92649
Number of successful extensions: 357
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 233
Number of HSP's gapped (non-prelim): 89
length of query: 497
length of database: 2,362,478
effective HSP length: 76
effective length of query: 421
effective length of database: 1,982,174
effective search space: 834495254
effective search space used: 834495254
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
- SilkBase 1999-2023 -