GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001703-TA|BGIBMGA001703-PA|IPR003599|Immunoglobulin
subtype, IPR003598|Immunoglobulin subtype 2,
IPR007110|Immunoglobulin-like, IPR008957|Fibronectin, type III-like
fold, IPR013151|Immunoglobulin, IPR013098|Immunoglobulin I-set
         (500 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    25   4.7  
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    24   8.2  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    24   8.2  

>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 25.0 bits (52), Expect = 4.7
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%)

Query: 52  GSLVLLWRRAPAVLTA---ASLMVTRDERFRLVDGYNLQITDVG 92
           G L+++      +LT    ASLM T   R+R+V G ++ + + G
Sbjct: 102 GPLIIVQLLETTLLTLVNYASLMATNAARYRMVAGKHIHLLEFG 145


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 8.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 371 LSFAVDSYPPLDELRLLYRQLAINESF 397
           L +  + YP ++E+R L R +A N  F
Sbjct: 65  LRYVKEGYPDVEEVRCLLRCVAFNLRF 91


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 8.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 371 LSFAVDSYPPLDELRLLYRQLAINESF 397
           L +  + YP ++E+R L R +A N  F
Sbjct: 65  LRYVKEGYPDVEEVRCLLRCVAFNLRF 91


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.134    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,939
Number of Sequences: 2123
Number of extensions: 21656
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29
Number of HSP's gapped (non-prelim): 3
length of query: 500
length of database: 516,269
effective HSP length: 67
effective length of query: 433
effective length of database: 374,028
effective search space: 161954124
effective search space used: 161954124
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 50 (24.2 bits)