GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001702-TA|BGIBMGA001702-PA|undefined
         (117 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY850123-1|AAX47276.1| 1307|Homo sapiens sperm associated antige...    29   3.6  
AY236870-1|AAP41817.1|  701|Homo sapiens MUC19 protein.                29   3.6  
AY236487-1|AAP74807.1|  766|Homo sapiens proliferation-inducing ...    29   3.6  
AK093065-1|BAC04041.1|  280|Homo sapiens protein ( Homo sapiens ...    29   3.6  
AF542172-1|AAQ11383.1|  508|Homo sapiens HLC-6 protein.                29   3.6  
AF327452-1|AAN61565.1| 1311|Homo sapiens JNK-associated leucine-...    29   3.6  
AB011088-1|BAA25442.3| 1382|Homo sapiens KIAA0516 protein protein.     29   3.6  
BC065040-1|AAH65040.1|  290|Homo sapiens chromosome 1 open readi...    29   4.8  
BC041843-1|AAH41843.1|  226|Homo sapiens C1orf63 protein protein.      29   4.8  
BC001892-1|AAH01892.1|  290|Homo sapiens chromosome 1 open readi...    29   4.8  
AL031432-3|CAB37992.1|  290|Homo sapiens chromosome 1 open readi...    29   4.8  
AK027318-1|BAB55038.1|  242|Homo sapiens protein ( Homo sapiens ...    29   4.8  
AF267856-1|AAG44725.1|  242|Homo sapiens HT033 protein.                29   4.8  
AF247168-1|AAG44543.1|  242|Homo sapiens NPD014 protein.               29   4.8  
DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.          28   8.4  
AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.         28   8.4  
AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor prot...    28   8.4  
AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein.             28   8.4  
AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.          28   8.4  
AB104446-1|BAC57496.1|  493|Homo sapiens hornerin protein.             28   8.4  

>AY850123-1|AAX47276.1| 1307|Homo sapiens sperm associated antigen 9
            transcript variant 1 protein.
          Length = 1307

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 82   ISMGSTGLGTD-TGYNFGSSSATAGGPVPLRSMLLI 116
            IS  S+  GTD TG   G S+   G   PL+SML+I
Sbjct: 1223 ISPQSSSSGTDLTGDKAGPSAQEPGSQTPLKSMLVI 1258


>AY236870-1|AAP41817.1|  701|Homo sapiens MUC19 protein.
          Length = 701

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/70 (24%), Positives = 31/70 (44%)

Query: 35  TSRMGQMSYTARSMYTKRTRRMGRTVAGRGRTVAGTDYAVADGRRMEISMGSTGLGTDTG 94
           T+ +G    +++++    +  +  T    G +V GT    +D +      G+TG+   T 
Sbjct: 105 TTALGSQLSSSQTVIPGSSGTISHTTVAPGSSVTGTTTGASDDQVTGSKTGTTGVALSTT 164

Query: 95  YNFGSSSATA 104
              GSSS  A
Sbjct: 165 VAPGSSSTEA 174


>AY236487-1|AAP74807.1|  766|Homo sapiens proliferation-inducing
           gene 6 protein.
          Length = 766

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 82  ISMGSTGLGTD-TGYNFGSSSATAGGPVPLRSMLLI 116
           IS  S+  GTD TG   G S+   G   PL+SML+I
Sbjct: 682 ISPQSSSSGTDLTGDKAGPSAQEPGSQTPLKSMLVI 717


>AK093065-1|BAC04041.1|  280|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35746 fis, clone TESTI2004399, moderately
           similar to APOMUCIN. ).
          Length = 280

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/70 (24%), Positives = 31/70 (44%)

Query: 35  TSRMGQMSYTARSMYTKRTRRMGRTVAGRGRTVAGTDYAVADGRRMEISMGSTGLGTDTG 94
           T+ +G    +++++    +  +  T    G +V GT    +D +      G+TG+   T 
Sbjct: 2   TTALGSQLSSSQTVIPGSSGTISHTTVAPGSSVTGTTTGASDDQVTGSKTGTTGVALSTT 61

Query: 95  YNFGSSSATA 104
              GSSS  A
Sbjct: 62  VAPGSSSTEA 71


>AF542172-1|AAQ11383.1|  508|Homo sapiens HLC-6 protein.
          Length = 508

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 82  ISMGSTGLGTD-TGYNFGSSSATAGGPVPLRSMLLI 116
           IS  S+  GTD TG   G S+   G   PL+SML+I
Sbjct: 424 ISPQSSSSGTDLTGDKAGPSAQEPGSQTPLKSMLVI 459


>AF327452-1|AAN61565.1| 1311|Homo sapiens JNK-associated
            leucine-zipper protein protein.
          Length = 1311

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 82   ISMGSTGLGTD-TGYNFGSSSATAGGPVPLRSMLLI 116
            IS  S+  GTD TG   G S+   G   PL+SML+I
Sbjct: 1227 ISPQSSSSGTDLTGDKAGPSAQEPGSQTPLKSMLVI 1262


>AB011088-1|BAA25442.3| 1382|Homo sapiens KIAA0516 protein protein.
          Length = 1382

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 82   ISMGSTGLGTD-TGYNFGSSSATAGGPVPLRSMLLI 116
            IS  S+  GTD TG   G S+   G   PL+SML+I
Sbjct: 1298 ISPQSSSSGTDLTGDKAGPSAQEPGSQTPLKSMLVI 1333


>BC065040-1|AAH65040.1|  290|Homo sapiens chromosome 1 open reading
           frame 63 protein.
          Length = 290

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 43  YTARSMYTKRTRRMGRTVAGRGRTVAGTDYAVADGRR 79
           Y + S Y  R+R   R+   RGR+  G  YA+A G+R
Sbjct: 105 YRSPSRYRSRSRSRSRS---RGRSYCGRAYAIARGQR 138


>BC041843-1|AAH41843.1|  226|Homo sapiens C1orf63 protein protein.
          Length = 226

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 43  YTARSMYTKRTRRMGRTVAGRGRTVAGTDYAVADGRR 79
           Y + S Y  R+R   R+   RGR+  G  YA+A G+R
Sbjct: 105 YRSPSRYRSRSRSRSRS---RGRSYCGRAYAIARGQR 138


>BC001892-1|AAH01892.1|  290|Homo sapiens chromosome 1 open reading
           frame 63 protein.
          Length = 290

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 43  YTARSMYTKRTRRMGRTVAGRGRTVAGTDYAVADGRR 79
           Y + S Y  R+R   R+   RGR+  G  YA+A G+R
Sbjct: 105 YRSPSRYRSRSRSRSRS---RGRSYCGRAYAIARGQR 138


>AL031432-3|CAB37992.1|  290|Homo sapiens chromosome 1 open reading
           frame 63 protein.
          Length = 290

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 43  YTARSMYTKRTRRMGRTVAGRGRTVAGTDYAVADGRR 79
           Y + S Y  R+R   R+   RGR+  G  YA+A G+R
Sbjct: 105 YRSPSRYRSRSRSRSRS---RGRSYCGRAYAIARGQR 138


>AK027318-1|BAB55038.1|  242|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14412 fis, clone HEMBA1004669, weakly similar to
           SON PROTEIN. ).
          Length = 242

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 43  YTARSMYTKRTRRMGRTVAGRGRTVAGTDYAVADGRR 79
           Y + S Y  R+R   R+   RGR+  G  YA+A G+R
Sbjct: 105 YRSPSRYRSRSRSRSRS---RGRSYCGRAYAIARGQR 138


>AF267856-1|AAG44725.1|  242|Homo sapiens HT033 protein.
          Length = 242

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 43  YTARSMYTKRTRRMGRTVAGRGRTVAGTDYAVADGRR 79
           Y + S Y  R+R   R+   RGR+  G  YA+A G+R
Sbjct: 105 YRSPSRYRSRSRSRSRS---RGRSYCGRAYAIARGQR 138


>AF247168-1|AAG44543.1|  242|Homo sapiens NPD014 protein.
          Length = 242

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 43  YTARSMYTKRTRRMGRTVAGRGRTVAGTDYAVADGRR 79
           Y + S Y  R+R   R+   RGR+  G  YA+A G+R
Sbjct: 105 YRSPSRYRSRSRSRSRS---RGRSYCGRAYAIARGQR 138


>DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.
          Length = 2391

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 9/76 (11%)

Query: 37   RMGQMSYTARSMYTKRTRRMGRTVAGRGRT------VAGTDYAVADGRRMEISMGSTGLG 90
            R GQ SY      + ++   G+  +G G T      V+G+D   + G+ +  S  STG G
Sbjct: 1147 RSGQSSYGQHGTGSSQSSGCGQHESGSGPTTSFGQHVSGSDNFSSSGQHISDSGQSTGFG 1206

Query: 91   TDTGYNFGSSSATAGG 106
                Y  GS  +T  G
Sbjct: 1207 Q---YGSGSGQSTGLG 1219


>AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.
          Length = 2391

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 9/76 (11%)

Query: 37   RMGQMSYTARSMYTKRTRRMGRTVAGRGRT------VAGTDYAVADGRRMEISMGSTGLG 90
            R GQ SY      + ++   G+  +G G T      V+G+D   + G+ +  S  STG G
Sbjct: 1147 RSGQSSYGQHGTGSSQSSGCGQHESGSGPTTSFGQHVSGSDNFSSSGQHISDSGQSTGFG 1206

Query: 91   TDTGYNFGSSSATAGG 106
                Y  GS  +T  G
Sbjct: 1207 Q---YGSGSGQSTGLG 1219


>AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor protein.
          Length = 2850

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 36   SRMGQMS-YTARSMYTKRTRRMGRTVAGRGRTVAGTDYAVADGRRMEISMGSTGLGTDTG 94
            S  GQ S Y  R   + ++   GR  AG G++++   +    G+        +G G  +G
Sbjct: 2738 SSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSLSHGRHGSGSGQSSSYGQHGSGSGQSSG 2797

Query: 95   YN-FGSSSATAG 105
            Y+  GS S   G
Sbjct: 2798 YSQHGSGSGQDG 2809


>AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein.
          Length = 2850

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 36   SRMGQMS-YTARSMYTKRTRRMGRTVAGRGRTVAGTDYAVADGRRMEISMGSTGLGTDTG 94
            S  GQ S Y  R   + ++   GR  AG G++++   +    G+        +G G  +G
Sbjct: 2738 SSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSLSHGRHGSGSGQSSSYGQHGSGSGQSSG 2797

Query: 95   YN-FGSSSATAG 105
            Y+  GS S   G
Sbjct: 2798 YSQHGSGSGQDG 2809


>AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.
          Length = 2391

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 9/76 (11%)

Query: 37   RMGQMSYTARSMYTKRTRRMGRTVAGRGRT------VAGTDYAVADGRRMEISMGSTGLG 90
            R GQ SY      + ++   G+  +G G T      V+G+D   + G+ +  S  STG G
Sbjct: 1147 RSGQSSYGQHGTGSSQSSGCGQHESGSGPTTSFGQHVSGSDNFSSSGQHISDSGQSTGFG 1206

Query: 91   TDTGYNFGSSSATAGG 106
                Y  GS  +T  G
Sbjct: 1207 Q---YGSGSGQSTGLG 1219


>AB104446-1|BAC57496.1|  493|Homo sapiens hornerin protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 36  SRMGQMS-YTARSMYTKRTRRMGRTVAGRGRTVAGTDYAVADGRRMEISMGSTGLGTDTG 94
           S  GQ S Y  R   + ++   GR  AG G++++   +    G+        +G G  +G
Sbjct: 381 SSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSLSHGRHGSGSGQSSSYGQHGSGSGQSSG 440

Query: 95  YN-FGSSSATAG 105
           Y+  GS S   G
Sbjct: 441 YSQHGSGSGQDG 452


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.132    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,414,849
Number of Sequences: 224733
Number of extensions: 515917
Number of successful extensions: 1673
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1654
Number of HSP's gapped (non-prelim): 37
length of query: 117
length of database: 73,234,838
effective HSP length: 80
effective length of query: 37
effective length of database: 55,256,198
effective search space: 2044479326
effective search space used: 2044479326
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)