SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001702-TA|BGIBMGA001702-PA|undefined
         (117 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   0.92 
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   0.92 
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   2.1  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   4.9  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   4.9  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    20   6.5  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                20   6.5  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    20   8.5  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    20   8.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   8.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   8.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   8.5  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    20   8.5  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 8   TGRMDRMEHCKGHM 21
           T  +DRM+HC+ HM
Sbjct: 380 TMSVDRMQHCELHM 393


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 8   TGRMDRMEHCKGHM 21
           T  +DRM+HC+ HM
Sbjct: 380 TMSVDRMQHCELHM 393


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 10  RMDRMEHCKGHMATHRDCMDHKAGRTSRMGQMSYTARSMYTKRTRRMGR 58
           RMDRM+          D MD +  + SR+ +M    R     RT RM R
Sbjct: 491 RMDRMDR-----MDRMDTMD-RTDKMSRIDRMDKIDRMDRMDRTNRMDR 533


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
          protein.
          Length = 620

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 40 QMSYTARSMYTKRTRRMGRTVAGRGRTVAGTDYAVAD 76
          Q   T   ++T   +  G+T  G+GRT     +A A+
Sbjct: 55 QTGPTHAPIFTIAVQIDGQTYEGKGRTKKMAKHAAAE 91


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 1  MGHKELCTGRMDRMEHCKGHMATHRDCMD 29
          M H+EL TG       C G   T +  +D
Sbjct: 17 MTHEELKTGIQTLQPICVGETGTSQKIID 45


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
          protein.
          Length = 74

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 8/18 (44%), Positives = 8/18 (44%)

Query: 7  CTGRMDRMEHCKGHMATH 24
          C  R  R  H K HM  H
Sbjct: 15 CHKRFTRDHHLKTHMRLH 32


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 36  SRMGQMSYTARSMYTKRTRRMG 57
           ++MG+ SYT  +M T  T   G
Sbjct: 218 AQMGRPSYTTATMATTSTPGSG 239


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2
          protein.
          Length = 162

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 10/38 (26%), Positives = 15/38 (39%)

Query: 2  GHKELCTGRMDRMEHCKGHMATHRDCMDHKAGRTSRMG 39
          G+K      + R +H      TH  C D  +   S+ G
Sbjct: 40 GNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHG 77


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
          protein.
          Length = 167

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 10/38 (26%), Positives = 15/38 (39%)

Query: 2  GHKELCTGRMDRMEHCKGHMATHRDCMDHKAGRTSRMG 39
          G+K      + R +H      TH  C D  +   S+ G
Sbjct: 45 GNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHG 82


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query: 87  TGLGTDTGYNFGSSSATAGG 106
           TG+G + GY    +  TA G
Sbjct: 149 TGVGRNVGYKIPITKLTAMG 168


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query: 87  TGLGTDTGYNFGSSSATAGG 106
           TG+G + GY    +  TA G
Sbjct: 149 TGVGRNVGYKIPITKLTAMG 168


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query: 87  TGLGTDTGYNFGSSSATAGG 106
           TG+G + GY    +  TA G
Sbjct: 149 TGVGRNVGYKIPITKLTAMG 168


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
          protein.
          Length = 167

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 10/38 (26%), Positives = 15/38 (39%)

Query: 2  GHKELCTGRMDRMEHCKGHMATHRDCMDHKAGRTSRMG 39
          G+K      + R +H      TH  C D  +   S+ G
Sbjct: 45 GNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHG 82


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.132    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,206
Number of Sequences: 429
Number of extensions: 884
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of query: 117
length of database: 140,377
effective HSP length: 51
effective length of query: 66
effective length of database: 118,498
effective search space:  7820868
effective search space used:  7820868
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.0 bits)
S2: 39 (19.8 bits)

- SilkBase 1999-2023 -