Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001701-TA|BGIBMGA001701-PA|undefined
(210 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07) 38 0.006
SB_39538| Best HMM Match : VWA (HMM E-Value=0) 36 0.033
SB_29487| Best HMM Match : Collagen (HMM E-Value=8.8) 31 0.93
SB_8748| Best HMM Match : Astacin (HMM E-Value=0) 31 0.93
SB_54431| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_59680| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 30 1.2
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 29 3.7
SB_53092| Best HMM Match : TT_ORF2 (HMM E-Value=3.4) 29 3.7
SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_50387| Best HMM Match : HLH (HMM E-Value=8.2e-05) 28 6.5
SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3) 28 6.5
SB_52986| Best HMM Match : zf-C2H2 (HMM E-Value=0.0042) 27 8.6
SB_48401| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_34344| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07)
Length = 1127
Score = 37.9 bits (84), Expect = 0.006
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Query: 53 TSPGNMLPMLPFPTIGAGLGYQMPYPF-GVGLGFTMGQPGSTVCETVSNGHTPLGYAGVG 111
T +MLP P P+ A Y MP +G G+ P ++ H L +
Sbjct: 832 TIDDSMLPR-PGPSFSA---YGMPNGLMRIGSGYPRVVPSFLHEWSLRTTHITLTTSNES 887
Query: 112 FPGLSGFAGLPSIPMPALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVPN 166
P L+ SIP SN S+PA+ + E+IP++A+ + TT E++P+
Sbjct: 888 IPSLT--TSNESIPALTTSNESIPALTTTTESIPSLATSNESIPSLTTSNESIPS 940
Score = 30.7 bits (66), Expect = 0.93
Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Query: 23 TTVCESTPNYALSSQLYPGLIPPSTTSVCETSPGNMLPMLPFPTIGAGLGYQMPYPFGVG 82
TT ES P+ A S++ P L + + T+ +P P T + +
Sbjct: 912 TTTTESIPSLATSNESIPSLTTSNESIPSLTTSNKSIP--PLTTSNESISSLTTSNESIP 969
Query: 83 LGFTMGQPGSTVCETVSNGHTP-LGYAGVGFPGLSGFAGLPSIPMPALSNLSVPAVNSVC 141
T + S T N P L + P L+ SI SN S+P++ +
Sbjct: 970 SLTTRNE--SIPFLTTHNESIPSLTTSNESIPSLT--TSNESISSLTTSNESIPSLTTRN 1025
Query: 142 ETIPNIASRALPVGGSTTVCENVP 165
E+IP++ +R + TT E++P
Sbjct: 1026 ESIPSLTTRNESIPSLTTRNESIP 1049
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 123 SIPMPALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVP 165
SIP SN S+PA+ + E+IP + + + TT E++P
Sbjct: 1047 SIPFLTTSNESIPALTTSNESIPALTTSNESIPALTTSNESIP 1089
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 123 SIPMPALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVPN 166
SIP SN S+PA+ + E+IP + + + TT E++P+
Sbjct: 1057 SIPALTTSNESIPALTTSNESIPALTTSNESIPALTTSNESIPS 1100
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 123 SIPMPALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVPN 166
SIP N S+P++ + E+IP++ + + TT E++P+
Sbjct: 977 SIPFLTTHNESIPSLTTSNESIPSLTTSNESISSLTTSNESIPS 1020
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 123 SIPMPALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVPN 166
SIP SN S+ ++ + E+IP++ +R + TT E++P+
Sbjct: 997 SIPSLTTSNESISSLTTSNESIPSLTTRNESIPSLTTRNESIPS 1040
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 97 TVSNGHTP-LGYAGVGFPGLSGFAGLPSIPMPALSNLSVPAVNSVCETIPNIASRALPVG 155
T SN P L + P L+ SIP A SN S+P++ + E+IP++ + +
Sbjct: 892 TTSNESIPALTTSNESIPALT--TTTESIPSLATSNESIPSLTTSNESIPSLTTSNKSIP 949
Query: 156 GSTTVCENV 164
TT E++
Sbjct: 950 PLTTSNESI 958
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 123 SIPMPALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVP 165
SIP N S+P++ + E+IP++ +R + TT E++P
Sbjct: 1017 SIPSLTTRNESIPSLTTRNESIPSLTTRNESIPFLTTSNESIP 1059
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 123 SIPMPALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVPN 166
SIP SN S+P++ + ++IP + + + TT E++P+
Sbjct: 927 SIPSLTTSNESIPSLTTSNKSIPPLTTSNESISSLTTSNESIPS 970
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 97 TVSNGHTP-LGYAGVGFPGLSGFAGLPSIPMPALSNLSVPAVNSVCETIPNIASR 150
T SN P L + P L+ SIP SN S+PA+ + E+IP++ +R
Sbjct: 1052 TTSNESIPALTTSNESIPALT--TSNESIPALTTSNESIPALTTSNESIPSLTTR 1104
>SB_39538| Best HMM Match : VWA (HMM E-Value=0)
Length = 3208
Score = 35.5 bits (78), Expect = 0.033
Identities = 41/141 (29%), Positives = 57/141 (40%), Gaps = 25/141 (17%)
Query: 39 YPGLIPPSTTSVCETSPGNMLPMLPFPTIGAGL----GYQMPYPFGVGLGFTMGQPGSTV 94
+PG +PP T+ PG FP+ G+G+ G +P G G+ G PGS +
Sbjct: 1342 FPGFVPPGTS--ISNFPG-------FPSPGSGIPGSPGSGIPGSPGSGIP---GSPGSGI 1389
Query: 95 CETVSNGHTPLGYAGVGFPGL--SGFAGLPSIPMPALSNLSVPAVNSVCETIPNIASRAL 152
+ +G P G G G PG SG G P +P +P ++ IP L
Sbjct: 1390 PGSPGSG-IP-GSPGSGIPGSPGSGIPGSPGSGIPGSPGSGIPGNPALPSAIP-----TL 1442
Query: 153 PVGGSTTVCENVPNFMSYGLP 173
P G E +P G P
Sbjct: 1443 PDGKRKPALEGIPPQCFLGEP 1463
>SB_29487| Best HMM Match : Collagen (HMM E-Value=8.8)
Length = 192
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 164 VPNFMSYGLPYGYG--FPIGINPVGGATTVCEPTVHGYGVGLPFGRS 208
+P YG P G G P G P+GGA + GYG G+ +G++
Sbjct: 46 IPAGQQYGQPLGMGGGMPYGQQPMGGAMGYGQGM--GYGQGMGYGQA 90
>SB_8748| Best HMM Match : Astacin (HMM E-Value=0)
Length = 757
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 164 VPNFMSYGLPYGY--GFPIGINPVGGATTVCEPTVHGYGVGLPFGRS 208
+P YG P G G P G P+GGA + GYG G+ +G++
Sbjct: 312 IPAGQQYGQPLGMEGGMPYGQQPMGGAMGYGQGM--GYGQGMGYGQA 356
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 67 IGAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSNG---HTPLGYAGVGFPGLSGFAGLP 122
+G +GY +G G+G+ PG + G P+G + G++ G P
Sbjct: 335 MGGAMGYGQGMGYGQGMGYGQAMPGQMPGQYGQAGFGARAPMGQPSIQLQGVTAVDGTP 393
>SB_54431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 81 VGLGF-TMGQPGSTVCETVSNGHTPLGYAGVGF 112
+GLGF QP TVC T+ + P G AG GF
Sbjct: 972 MGLGFYDKKQPDGTVCRTMVARYRPPGNAGGGF 1004
>SB_59680| Best HMM Match : Extensin_2 (HMM E-Value=1.2)
Length = 412
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 128 ALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVPNFMSYGLPYGYGFPIGINPVGG 187
A+S VP + C+T P AS+A P G P LP GY P G +P G
Sbjct: 39 AMSAPCVPTPANPCQT-PAAASQARPAPGRAPARN--PAQQRVNLP-GYTSPYGFSPYGK 94
Query: 188 ATTVCEPTVHG 198
+V HG
Sbjct: 95 KKSVVPKKGHG 105
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 27 ESTPNYALSSQLYPGLIPPSTTSVCETSPGNMLPM 61
E+TP+ ++P TTS ET+PG PM
Sbjct: 743 ETTPSTIFPRTIFPVAASSRTTSPVETTPGTAAPM 777
>SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
Query: 88 GQPGSTVCETVSNGHTPLGYAGVGFPGLSGFAGLPSIPMPALSNLSVPAVNSVCETIPNI 147
G S C + +P GY + PG SG AG + P +++ P VN +C+++
Sbjct: 25 GLCASNPCTLGACMESPSGYYCICPPGYSG-AGCRTQISPCSPDVN-PCVNGICKSVGGE 82
Query: 148 ASRALPVGGSTTVCENVPNFMSYGLPYGYGFPIG 181
P G + CE L + G P G
Sbjct: 83 IRCTCPGGWTGQRCETRLGGSIGSLEFCEGKPFG 116
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Query: 83 LGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGL--SGFAGLPSIPMPALSNLSVPAVNSV 140
LGF + P ST +T + +P + P + + AG IP L VP S
Sbjct: 2042 LGF-LKVPASTPPDTTPSASSPADTSSSSKPSIGDAAKAGFLKIPTAGLPKAEVPKETST 2100
Query: 141 CETIPNIASRALPVGGSTTVCEN 163
T A G +TT +N
Sbjct: 2101 STTTTQPLPFAFGTGAATTTDDN 2123
>SB_53092| Best HMM Match : TT_ORF2 (HMM E-Value=3.4)
Length = 598
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 107 YAGVGFPG----LSGFAGLPSIPMPALSNLSVPAVNSVCET 143
YAG+G PG L G+ + +LS + + AVNSVC++
Sbjct: 26 YAGIGRPGGDPRLRGYVDEFYVFNKSLSTMEMEAVNSVCKS 66
>SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 84 GFTMGQPGSTVCETVSNGHTPLGY-AGVGFPGLSGFAGLPSIPMPA 128
GF G PG P GY G G PG+ G G+P P PA
Sbjct: 274 GF-QGPPGLDGMPGAPGMPGPQGYPGGSGAPGIPGSPGMPGPPGPA 318
>SB_50387| Best HMM Match : HLH (HMM E-Value=8.2e-05)
Length = 791
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 13 CSVSCNPLGQTTVCESTPNYALSSQLYPGLIPPSTTSVCETSPGNMLPMLPFPTIGAGLG 72
C ++ +PL ++ Y SQ+ P L+ T+ + SP + + FP AG
Sbjct: 592 CCITNDPLAMRRWLSASDLYR--SQMNP-LLAAQTSLM---SPVDRMRYFQFPFHYAGYP 645
Query: 73 YQMPYPFGVGLGF 85
+ P PFG+ GF
Sbjct: 646 FPGPGPFGIAAGF 658
>SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 20 LGQTTVC-ESTPNYALSSQLYPGLIPP--STTSVCETSPGNMLPM-LPFPTIG 68
+ QTT +S PN + PGL+PP PG M P LPFP G
Sbjct: 192 IDQTTAAFQSKPNSQMPPNAPPGLMPPPGMLPPPGGMPPGRMPPQGLPFPPPG 244
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Query: 106 GYAG-VGFPGLSGFAGLPSIP 125
G+ G VGFPGL G GLP P
Sbjct: 3334 GFPGMVGFPGLRGKTGLPGKP 3354
>SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3)
Length = 713
Score = 27.9 bits (59), Expect = 6.5
Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Query: 65 PTIGAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSNGHT-PLGY-AGVGFP---GLSGFA 119
P G +G P P MGQP S SNG + P AG G P G +
Sbjct: 509 PAGGPPMGQGPPRPPTNPTAAPMGQPPSMTSALSSNGPSIPDNQRAGSGTPPGVGPAPMP 568
Query: 120 GLPSIPMPA 128
GLP +P PA
Sbjct: 569 GLPPMPRPA 577
>SB_52986| Best HMM Match : zf-C2H2 (HMM E-Value=0.0042)
Length = 623
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 64 FPTIGAGLG-----YQMPYPFGVGLGFTMGQPGSTVCETVSNGHTPLGY 107
FPT+G G+G PY G+ PG ++ +TV+ P G+
Sbjct: 461 FPTLGGGVGGGAKPKSTPYTTPQGVSTVNPPPGLSLVQTVAPSQPPPGF 509
>SB_48401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 64 FPTIGAGLG-----YQMPYPFGVGLGFTMGQPGSTVCETVSNGHTPLGY 107
FPT+G G+G PY G+ PG ++ +TV+ P G+
Sbjct: 428 FPTLGGGVGGGAKPKSTPYTTPQGVSTVNPPPGLSLVQTVAPSQPPPGF 476
>SB_34344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 27 ESTPNYALSSQLYPGLIP--PSTTSVCETSPGNMLPMLPFPTI 67
+S PN ++ GL+P P TT+ C++SP + + P P +
Sbjct: 720 DSFPNGQAGNRDITGLVPNGPVTTARCDSSPDILESIKPSPPV 762
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.140 0.450
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,515,576
Number of Sequences: 59808
Number of extensions: 408238
Number of successful extensions: 958
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 925
Number of HSP's gapped (non-prelim): 45
length of query: 210
length of database: 16,821,457
effective HSP length: 79
effective length of query: 131
effective length of database: 12,096,625
effective search space: 1584657875
effective search space used: 1584657875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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