Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001701-TA|BGIBMGA001701-PA|undefined
(210 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g02670.1 68416.m00258 proline-rich family protein contains pr... 35 0.046
At3g50570.1 68416.m05531 hydroxyproline-rich glycoprotein family... 33 0.11
At2g28670.1 68415.m03485 disease resistance-responsive family pr... 30 1.00
At1g72390.1 68414.m08373 expressed protein 30 1.00
At3g29635.1 68416.m03729 transferase family protein similar to a... 29 3.1
At1g69730.1 68414.m08024 protein kinase family protein contains ... 28 4.0
At2g24580.1 68415.m02935 sarcosine oxidase family protein simila... 28 5.3
At1g32610.1 68414.m04024 hydroxyproline-rich glycoprotein family... 28 5.3
At1g03457.2 68414.m00327 RNA-binding protein, putative similar t... 28 5.3
At1g03457.1 68414.m00326 RNA-binding protein, putative similar t... 28 5.3
At1g16260.1 68414.m01947 protein kinase family protein contains ... 27 7.0
At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containi... 27 9.3
At2g27810.2 68415.m03372 xanthine/uracil permease family protein... 27 9.3
At2g27810.1 68415.m03371 xanthine/uracil permease family protein... 27 9.3
At1g04660.1 68414.m00463 glycine-rich protein 27 9.3
>At3g02670.1 68416.m00258 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 217
Score = 34.7 bits (76), Expect = 0.046
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 63 PFPTIGAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGLSGFAGLP 122
P I G+++P+PF G G PGS + G G PG+ G GLP
Sbjct: 65 PTSPIPGSPGFRLPFPFPSSPGGNPGIPGSPGFRLPFPFPSSPG-GNPGIPGIPGIPGLP 123
Query: 123 SIP 125
IP
Sbjct: 124 GIP 126
Score = 34.3 bits (75), Expect = 0.061
Identities = 32/111 (28%), Positives = 41/111 (36%), Gaps = 9/111 (8%)
Query: 23 TTVCESTPNYALSSQLYPGLIPPSTTSVCETSPGNMLPMLPFPT-------IGAGLGYQM 75
TT N A S + L TS SPG LP PFP+ I G+++
Sbjct: 41 TTTTNEANNLAFVSDPFSSLQSSPPTSPIPGSPGFRLP-FPFPSSPGGNPGIPGSPGFRL 99
Query: 76 PYPFGVGLGFTMGQPGSTVCETVSNGHTPLGY-AGVGFPGLSGFAGLPSIP 125
P+PF G G PG + G+ FP G +P IP
Sbjct: 100 PFPFPSSPGGNPGIPGIPGIPGLPGIPGSPGFRLPFPFPSSPGGGSIPGIP 150
Score = 31.9 bits (69), Expect = 0.33
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
Query: 59 LPMLP-FPTIGAGLGYQMPYPF--GVGLGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGL 115
+P +P P I G+++P+PF G G G PGS P +G G PGL
Sbjct: 116 IPGIPGLPGIPGSPGFRLPFPFPSSPGGGSIPGIPGSPGFRL----PFPFPPSGGGIPGL 171
Query: 116 S-GFAGLPSIPMPALSNLSVPAVNSVCETIPNIASRALP 153
F LP + +P L L P + V TIP+ P
Sbjct: 172 PLPFPPLPPVTIPGLP-LPFPPLPPV--TIPSFPGFRFP 207
>At3g50570.1 68416.m05531 hydroxyproline-rich glycoprotein family
protein contains proline-rich protein domains,
INTERPRO:IPR000694
Length = 189
Score = 33.5 bits (73), Expect = 0.11
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 59 LPMLPFPTIGAGLGYQMPYPFGVGLGFTMGQPGST----VCETVSNGHTPLGYAGVGFPG 114
L LP PT+G+ + P+P L G + C + S+ +TP G FP
Sbjct: 13 LVSLPNPTVGST---KKPWPKPSDLANHNNNFGDSKVGWACSSSSDPNTPPSPPG-SFPN 68
Query: 115 LSGFAGLPSIPMPALSNLSVPAV 137
+ G+P+IP P + + +P +
Sbjct: 69 IPQIPGIPNIPFPNIPGIPIPNI 91
>At2g28670.1 68415.m03485 disease resistance-responsive family
protein / fibroin-related contains similarity to silk
fibroin heavy chain [Bombyx mori] gi|765323|gb|AAB31861;
contains disease resistance response protien domain
Pfam:FP03018
Length = 447
Score = 30.3 bits (65), Expect = 1.00
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Query: 66 TIGAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGLSGFAGLPSIP 125
T+G+G G G+G G G GS T G +G G G AG SIP
Sbjct: 37 TLGSGSGST-----GIGFGAGTGSSGSG--STGFGFGAGSGSSGSGSTGSGLGAGTGSIP 89
Query: 126 MPALSNLSVPAVNSVCETIPNIASRALPVGGSTT 159
+P +SV ++ S +LP GS T
Sbjct: 90 SSGSGPGLLPTASSVPGSLAGGGSGSLPTTGSAT 123
>At1g72390.1 68414.m08373 expressed protein
Length = 1088
Score = 30.3 bits (65), Expect = 1.00
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 70 GLGYQMPYPFGVGLGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGLSGFAGLPSIPMPAL 129
GLG + G+G+G MG G+++ + G+ L AG G G +G + S+ +P +
Sbjct: 760 GLGSGVGMGMGMGMGMGMGSMGNSIAGLGALGN-QLNMAGRGMGG-TGISS--SMSVPGI 815
Query: 130 SNLSVPAVNSVCETIPNIASRALPVGGST 158
N+ +N + N S+ L G T
Sbjct: 816 GNMGQNPMNLNPASNLNAISQQLRSGALT 844
>At3g29635.1 68416.m03729 transferase family protein similar to
anthocyanin 5-aromatic acyltransferase from Gentiana
triflora GI:4185599, malonyl CoA:anthocyanin
5-O-glucoside-6'''-O-malonyltransferase from Perilla
frutescens GI:17980232, Salvia splendens GI:17980234;
contains Pfam profile PF02458 transferase family
Length = 458
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 106 GYAGVGFPGLSGFAGLPSIPMPALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVP 165
GY F G GF + I ++ ++ + + ++CE N ++++ G
Sbjct: 334 GYKANVFLGEDGFVNMVEILSDSVRSIGLRKLETICELYIN-GTKSVKPGTQIGSIAGSN 392
Query: 166 NFMSYGLPYGYGFP 179
F YG +G+G P
Sbjct: 393 QFGLYGSDFGWGKP 406
>At1g69730.1 68414.m08024 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 792
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 72 GYQMPYPFGVGLGFTMGQPGSTVCETVSNG 101
G ++PYPFG+G G + + C T ++G
Sbjct: 37 GIKIPYPFGMGKGCYLEKWYEITCNTSTSG 66
>At2g24580.1 68415.m02935 sarcosine oxidase family protein similar
to peroxisomal sarcosine oxidase from Homo sapiens
[SP|Q9P0Z9], Oryctolagus cuniculus [SP|P79371], Mus
musculus [SP|Q9D826]
Length = 416
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 159 TVCENVPNFMSYGLPYGYGFP 179
T+ P F SYG PY YG P
Sbjct: 248 TIDGEFPTFASYGAPYVYGTP 268
>At1g32610.1 68414.m04024 hydroxyproline-rich glycoprotein family
protein
Length = 291
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 29 TP-NYALSSQLYPGLIPPSTTSVCETSPGNMLPM 61
TP NY SS PG++ P T + SP ++P+
Sbjct: 250 TPRNYTFSSMDQPGILGPGTIPLPHASPFGVIPI 283
>At1g03457.2 68414.m00327 RNA-binding protein, putative similar to
Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-binding
protein [Homo sapiens] GI:15341327; contains InterPro
entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 438
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 48 TSVCETSPGNMLPMLPFPTIGAGLGYQ-MPYPFGVGLGFTMGQ-PGSTVCETVSNGHTPL 105
T++ E+ P + P FPT GY + YP G + P +TV +SN T +
Sbjct: 268 TALTESVPPRLAPRRNFPTALGNYGYHGLQYPMAFPRGMIPPRLPLTTVSPGISNNGTSI 327
>At1g03457.1 68414.m00326 RNA-binding protein, putative similar to
Etr-1 [Danio rerio] GI:7670536, BRUNO-like 6 RNA-binding
protein [Homo sapiens] GI:15341327; contains InterPro
entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 429
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 48 TSVCETSPGNMLPMLPFPTIGAGLGYQ-MPYPFGVGLGFTMGQ-PGSTVCETVSNGHTPL 105
T++ E+ P + P FPT GY + YP G + P +TV +SN T +
Sbjct: 259 TALTESVPPRLAPRRNFPTALGNYGYHGLQYPMAFPRGMIPPRLPLTTVSPGISNNGTSI 318
>At1g16260.1 68414.m01947 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 27.5 bits (58), Expect = 7.0
Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 1/151 (0%)
Query: 50 VCETSPGNMLPMLPFPTIGAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSNGHTPLGYAG 109
+CE + + P+ +PYPFG+G G + VC++ S+ L
Sbjct: 17 ICEYAAASTFPLALRNCSDHCGNVSVPYPFGIGKGCYKNKWFEIVCKSSSDQQPILLLPR 76
Query: 110 VGFPGLSGFAGLP-SIPMPALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVPNFM 168
+ S G P SI + + P +S C +S +L + GS F
Sbjct: 77 IRRAVTSFNLGDPFSISVYNKFYIQSPLKHSGCPNRDGYSSSSLNLKGSPFFISENNKFT 136
Query: 169 SYGLPYGYGFPIGINPVGGATTVCEPTVHGY 199
+ G + + G T C + Y
Sbjct: 137 AVGCNNKAFMNVTGLQIVGCETTCGNEIRSY 167
>At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containing
protein similar to Hsc70-interacting protein (Hip) from
{Homo sapiens} SP|P50502, {Rattus norvegicus} SP|P50503;
contains Pfam profile PF00515: tetratricopeptide repeat
(TPR) domain
Length = 441
Score = 27.1 bits (57), Expect = 9.3
Identities = 26/71 (36%), Positives = 30/71 (42%), Gaps = 9/71 (12%)
Query: 55 PGNMLPMLP-FPTIGAGLGYQMP--YPFGVGLGFTMGQPGSTVCETVSNGHTPLGYAGVG 111
PG M M FP G+G MP +P G+G G G G G P G G G
Sbjct: 310 PGGMGGMPGGFPGGMGGMG-GMPGGFPGGMGGGMPAGMGGGM---PGMGGGMPAGMGGGG 365
Query: 112 FPGLSGFAGLP 122
PG G G+P
Sbjct: 366 MPGAGG--GMP 374
>At2g27810.2 68415.m03372 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 660
Score = 27.1 bits (57), Expect = 9.3
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 103 TPLGYAGVGFPGLSGFAG-LPSIPMPALSNLSVPAVNSVCETIPNIASRALPVGGSTTV 160
TP G +GF GL + L S+ + L + VPA+ E + N+ S L V G TT+
Sbjct: 176 TP-GLVPIGFYGLQHYLSMLGSLILVPL--VIVPAMGGSHEEVANVVSTVLFVSGITTL 231
>At2g27810.1 68415.m03371 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 709
Score = 27.1 bits (57), Expect = 9.3
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 103 TPLGYAGVGFPGLSGFAG-LPSIPMPALSNLSVPAVNSVCETIPNIASRALPVGGSTTV 160
TP G +GF GL + L S+ + L + VPA+ E + N+ S L V G TT+
Sbjct: 176 TP-GLVPIGFYGLQHYLSMLGSLILVPL--VIVPAMGGSHEEVANVVSTVLFVSGITTL 231
>At1g04660.1 68414.m00463 glycine-rich protein
Length = 212
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 106 GYAGVG-FPGLSGFAGLPSIPMPALSNL 132
G AGVG F G+ G AG+ + MP + L
Sbjct: 65 GVAGVGGFAGVGGVAGVGGLGMPLIGGL 92
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.140 0.450
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,039,576
Number of Sequences: 28952
Number of extensions: 291484
Number of successful extensions: 645
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 633
Number of HSP's gapped (non-prelim): 22
length of query: 210
length of database: 12,070,560
effective HSP length: 78
effective length of query: 132
effective length of database: 9,812,304
effective search space: 1295224128
effective search space used: 1295224128
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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