BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001701-TA|BGIBMGA001701-PA|undefined
(210 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 28 0.18
AY578802-1|AAT07307.1| 108|Anopheles gambiae FK506-binding prot... 28 0.18
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 27 0.41
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 25 2.2
X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein. 24 2.9
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 24 2.9
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 5.1
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 23 6.7
AY313948-1|AAP76391.1| 424|Anopheles gambiae cytochrome P450 CY... 23 8.9
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 23 8.9
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 28.3 bits (60), Expect = 0.18
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Query: 109 GVGFPGLSGFAGLPSIPMPALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVPNFM 168
GVG +G GL A + + A + +I + LP+GGS+++ E++
Sbjct: 608 GVGAAAAAGVGGLGCDSGAAAA--AAAAAAAAAASILGFSGVPLPLGGSSSLVESLVEHH 665
Query: 169 SYGLPYGYGFPIGINPVGGATTVCEPTVHGYGVGLPFG 206
G G G + GG + G G P+G
Sbjct: 666 RLAASLGGGAVGGGSGAGGGAGSSGGSGGGLASGSPYG 703
>AY578802-1|AAT07307.1| 108|Anopheles gambiae FK506-binding
protein protein.
Length = 108
Score = 28.3 bits (60), Expect = 0.18
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 20 LGQTTVCESTPNYALSSQLYPGLIPPS 46
+GQ +P+YA S+ +PG+IPP+
Sbjct: 69 VGQRAKLVCSPDYAYGSRGHPGVIPPN 95
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 27.1 bits (57), Expect = 0.41
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 82 GLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSIP 125
G +G+PG +S G G+ G PGL G AGL +P
Sbjct: 482 GFPGAIGRPGKVGVPGLSGEAGAKGEMGIQGLPGLPGPAGLNGLP 526
Score = 25.0 bits (52), Expect = 1.7
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 88 GQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSI 124
G G + ++ + P G G G PGL G AGLP +
Sbjct: 642 GDKGERDRDGLNGLNGPQGMKGDRGMPGLEGVAGLPGM 679
Score = 24.6 bits (51), Expect = 2.2
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 111 GFPGLSGFAGLPSIP 125
G PGL+G AG+P P
Sbjct: 731 GLPGLAGPAGIPGAP 745
Score = 23.8 bits (49), Expect = 3.9
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 65 PTIGAGL-GYQMPYPFGVGLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSG---FA 119
P AG+ GY P P G G G T + + G GV GFPG+ G
Sbjct: 339 PKGDAGVPGYGRPGPQG-----EKGDIGLTGVNGLPGLNGVKGDMGVPGFPGVKGDKGTT 393
Query: 120 GLPSIPMP 127
GLP IP P
Sbjct: 394 GLPGIPGP 401
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 24.6 bits (51), Expect = 2.2
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 88 GQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSIP 125
G+PG+ E + P G G GFPG G G+P P
Sbjct: 229 GEPGNDGLEGLPG---PQGEVGPRGFPGRPGEKGVPGTP 264
Score = 23.8 bits (49), Expect = 3.9
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 111 GFPGLSGFAGLPSIP 125
G+PG+ G G+P +P
Sbjct: 157 GYPGIPGTNGVPGVP 171
Score = 23.0 bits (47), Expect = 6.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 106 GYAGVGFPGLSGFAGLPSIP 125
G G G PG G AG+ P
Sbjct: 498 GQPGYGIPGQKGNAGMAGFP 517
Score = 22.6 bits (46), Expect = 8.9
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 82 GLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSIPMP 127
GL G PG+ V G G G GL G +GLP P P
Sbjct: 154 GLPGYPGIPGTNGVPGVPGAPGLAGRDGCNGTDGLPGLSGLPGNPGP 200
Score = 22.6 bits (46), Expect = 8.9
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 88 GQPGSTVCETVSNGHTPLGYAG-VGFPGLSGFAGLPSIPMP 127
G PG E + G +G VG PG G G P P P
Sbjct: 450 GVPGRPGPEGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGP 490
>X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein.
Length = 696
Score = 24.2 bits (50), Expect = 2.9
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 55 PGNMLPMLPFPTIGAGLGYQMPYPFG-VGLGFTMG--QPGSTV 94
PGN+ P P T G G M FG G GF+ QP ++V
Sbjct: 467 PGNVTPTPPAYTTLGGTGGTMGNLFGQFGTGFSNAATQPNASV 509
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 24.2 bits (50), Expect = 2.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 147 IASRALPVGGSTTVCENVPNFMSYG 171
I S + P+GG++T +VP+ YG
Sbjct: 429 IKSESNPLGGASTTPTSVPSSNGYG 453
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.4 bits (48), Expect = 5.1
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 114 GLSGFAGLPSIPMPALS---NLSVPAVNSVCETIP 145
GLS GLP +P P NLS P+ V + P
Sbjct: 588 GLSMGLGLPQVPQPPAGSSLNLSHPSAGMVPQPPP 622
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 23.0 bits (47), Expect = 6.7
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 59 LPMLPFPTIGAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSN 100
LP+LP + G M G G G + G GST+ ++
Sbjct: 928 LPLLPSNALAGNNGVIMTGVGGGGGGGSAGGAGSTISNNTNS 969
>AY313948-1|AAP76391.1| 424|Anopheles gambiae cytochrome P450
CYP6M4 protein.
Length = 424
Score = 22.6 bits (46), Expect = 8.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 43 IPPSTTSVCETSPGNMLPML 62
I P TTSV E M+P+L
Sbjct: 322 IVPGTTSVLEAGTSVMIPVL 341
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 22.6 bits (46), Expect = 8.9
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 146 NIASRALPVGGSTTVCENVPNFMSYGLPYGYGFP 179
N+ R VG VC + P + G P+ G P
Sbjct: 683 NMCIRCGVVGHMAKVCTSQPKCLKCGGPHTIGHP 716
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.320 0.140 0.450
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 273,636
Number of Sequences: 2123
Number of extensions: 13258
Number of successful extensions: 41
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 26
length of query: 210
length of database: 516,269
effective HSP length: 61
effective length of query: 149
effective length of database: 386,766
effective search space: 57628134
effective search space used: 57628134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)
- SilkBase 1999-2023 -