Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001701-TA|BGIBMGA001701-PA|undefined
(210 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 38 0.005
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 38 0.005
AC024817-29|AAK68530.1| 280|Caenorhabditis elegans C-type lecti... 32 0.35
U13876-11|AAN63395.1| 201|Caenorhabditis elegans Coenzyme q (ub... 31 0.80
U13876-10|AAN63394.1| 216|Caenorhabditis elegans Coenzyme q (ub... 31 0.80
U13876-9|AAW88395.1| 356|Caenorhabditis elegans Coenzyme q (ubi... 31 0.80
U13876-8|AAN63396.1| 370|Caenorhabditis elegans Coenzyme q (ubi... 31 0.80
U13876-7|AAW88396.1| 427|Caenorhabditis elegans Coenzyme q (ubi... 31 0.80
AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical ... 30 1.1
Z46242-12|CAA86332.1| 690|Caenorhabditis elegans Hypothetical p... 29 1.9
Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical p... 29 1.9
AF256467-1|AAF71546.1| 690|Caenorhabditis elegans SEL-5B serine... 29 1.9
AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A serine... 29 1.9
AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen prot... 29 1.9
Z77663-2|CAB01209.1| 215|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 2.5
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 2.5
U70847-2|AAB09105.2| 185|Caenorhabditis elegans Hypothetical pr... 29 2.5
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 2.5
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 2.5
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 2.5
AL117200-6|CAB55058.1| 209|Caenorhabditis elegans Hypothetical ... 29 3.2
Z29117-13|CAA82377.2| 435|Caenorhabditis elegans Hypothetical p... 28 4.3
AL132860-17|CAB60516.1| 497|Caenorhabditis elegans Hypothetical... 28 4.3
AL132860-16|CAB60499.1| 512|Caenorhabditis elegans Hypothetical... 28 4.3
Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z35600-2|CAA84663.1| 394|Caenorhabditis elegans Hypothetical pr... 27 7.5
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 27 7.5
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 27 7.5
J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein. 27 7.5
Z81530-3|CAB04307.1| 64|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z49132-2|CAA88982.1| 64|Caenorhabditis elegans Hypothetical pr... 27 9.9
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 27 9.9
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 27 9.9
AF016451-13|AAB65994.1| 317|Caenorhabditis elegans Hypothetical... 27 9.9
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 77 YPFGVGLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSIP 125
YP GL GQPG + + P GY G+ G PGL G +GLP +P
Sbjct: 818 YPGNPGLS---GQPGDAGYDGLDGVPGPPGYPGITGMPGLKGESGLPGLP 864
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 101 GHTPLGYAG-VGFPGLSGFAGLPSIPMP 127
G T G+ G VG+PG +G AG +P P
Sbjct: 564 GETGFGFPGQVGYPGPNGDAGAAGLPGP 591
Score = 28.3 bits (60), Expect = 4.3
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 55 PGNMLPMLPFPTIGAGLGYQMPYPFGV-GLGFTMGQPGSTVCETVSNGHTPLGYAGV-GF 112
PGN L +P +GY P P G GL G PG E NG + G G+ G
Sbjct: 775 PGN----LAYPGQPGDVGY--PGPDGPPGLPGQDGLPGLNG-ERGDNGDSYPGNPGLSGQ 827
Query: 113 PGLSGFAGLPSIPMP 127
PG +G+ GL +P P
Sbjct: 828 PGDAGYDGLDGVPGP 842
Score = 27.5 bits (58), Expect = 7.5
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 68 GAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSN--GHTPLGYAGV-GFPGLSGFAGLPSI 124
G GL P VG +G PG+ + G+T G G G+PG +G GLP
Sbjct: 383 GKGLPGHDGLPGPVGPRGPVGAPGAPGQPGIDGMPGYTEKGDRGEDGYPGFAGEPGLPGE 442
Query: 125 P 125
P
Sbjct: 443 P 443
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 77 YPFGVGLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSIP 125
YP GL GQPG + + P GY G+ G PGL G +GLP +P
Sbjct: 1075 YPGNPGLS---GQPGDAGYDGLDGVPGPPGYPGITGMPGLKGESGLPGLP 1121
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 101 GHTPLGYAG-VGFPGLSGFAGLPSIPMP 127
G T G+ G VG+PG +G AG +P P
Sbjct: 821 GETGFGFPGQVGYPGPNGDAGAAGLPGP 848
Score = 28.3 bits (60), Expect = 4.3
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 55 PGNMLPMLPFPTIGAGLGYQMPYPFGV-GLGFTMGQPGSTVCETVSNGHTPLGYAGV-GF 112
PGN L +P +GY P P G GL G PG E NG + G G+ G
Sbjct: 1032 PGN----LAYPGQPGDVGY--PGPDGPPGLPGQDGLPGLNG-ERGDNGDSYPGNPGLSGQ 1084
Query: 113 PGLSGFAGLPSIPMP 127
PG +G+ GL +P P
Sbjct: 1085 PGDAGYDGLDGVPGP 1099
Score = 27.5 bits (58), Expect = 7.5
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 68 GAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSN--GHTPLGYAGV-GFPGLSGFAGLPSI 124
G GL P VG +G PG+ + G+T G G G+PG +G GLP
Sbjct: 383 GKGLPGHDGLPGPVGPRGPVGAPGAPGQPGIDGMPGYTEKGDRGEDGYPGFAGEPGLPGE 442
Query: 125 P 125
P
Sbjct: 443 P 443
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 77 YPFGVGLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSIP 125
YP GL GQPG + + P GY G+ G PGL G +GLP +P
Sbjct: 1074 YPGNPGLS---GQPGDAGYDGLDGVPGPPGYPGITGMPGLKGESGLPGLP 1120
Score = 28.3 bits (60), Expect = 4.3
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 55 PGNMLPMLPFPTIGAGLGYQMPYPFGV-GLGFTMGQPGSTVCETVSNGHTPLGYAGV-GF 112
PGN L +P +GY P P G GL G PG E NG + G G+ G
Sbjct: 1031 PGN----LAYPGQPGDVGY--PGPDGPPGLPGQDGLPGLNG-ERGDNGDSYPGNPGLSGQ 1083
Query: 113 PGLSGFAGLPSIPMP 127
PG +G+ GL +P P
Sbjct: 1084 PGDAGYDGLDGVPGP 1098
Score = 27.5 bits (58), Expect = 7.5
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 68 GAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSN--GHTPLGYAGV-GFPGLSGFAGLPSI 124
G GL P VG +G PG+ + G+T G G G+PG +G GLP
Sbjct: 382 GKGLPGHDGLPGPVGPRGPVGAPGAPGQPGIDGMPGYTEKGDRGEDGYPGFAGEPGLPGE 441
Query: 125 P 125
P
Sbjct: 442 P 442
>AC024817-29|AAK68530.1| 280|Caenorhabditis elegans C-type lectin
protein 85 protein.
Length = 280
Score = 31.9 bits (69), Expect = 0.35
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Query: 28 STPNYALSSQLYPGLIPPSTTSVCETSPGNMLPM---LPFPTIGAGLGYQMPYPFGVGLG 84
STPNY + YP P S + S P +P GA GY + G +
Sbjct: 152 STPNYGSTG--YPVSYPVSGATEYPASSMTDSPASGATGYPASGA-TGYPVSGATGYPVS 208
Query: 85 FTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSIPM---PALSNLSVPA 136
G P S++ ++ ++G T +G G+P SG G P+ M PA PA
Sbjct: 209 GATGYPASSMTDSPASGATDYPASGATGYPA-SGATGYPASSMTDSPASGATGYPA 263
>U13876-11|AAN63395.1| 201|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 2, isoform d protein.
Length = 201
Score = 30.7 bits (66), Expect = 0.80
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 10 AVICSVSCNPLGQTTVCESTPNYALSSQLYPGLIPPSTTSVCETSPGNMLPMLPFPTIGA 69
++ C V N ++ EST + +S P + P+ +S+ +SP N+ P L +
Sbjct: 14 SINCIVGSNTSTSYSLDESTKRWISTSTKQPMSLIPTASSLVASSPPNLKPYLQLMRVDK 73
Query: 70 GLGYQMPY 77
+G + Y
Sbjct: 74 PIGTWLLY 81
>U13876-10|AAN63394.1| 216|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 2, isoform c protein.
Length = 216
Score = 30.7 bits (66), Expect = 0.80
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 10 AVICSVSCNPLGQTTVCESTPNYALSSQLYPGLIPPSTTSVCETSPGNMLPMLPFPTIGA 69
++ C V N ++ EST + +S P + P+ +S+ +SP N+ P L +
Sbjct: 14 SINCIVGSNTSTSYSLDESTKRWISTSTKQPMSLIPTASSLVASSPPNLKPYLQLMRVDK 73
Query: 70 GLGYQMPY 77
+G + Y
Sbjct: 74 PIGTWLLY 81
>U13876-9|AAW88395.1| 356|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 2, isoform a protein.
Length = 356
Score = 30.7 bits (66), Expect = 0.80
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 10 AVICSVSCNPLGQTTVCESTPNYALSSQLYPGLIPPSTTSVCETSPGNMLPMLPFPTIGA 69
++ C V N ++ EST + +S P + P+ +S+ +SP N+ P L +
Sbjct: 14 SINCIVGSNTSTSYSLDESTKRWISTSTKQPMSLIPTASSLVASSPPNLKPYLQLMRVDK 73
Query: 70 GLGYQMPY 77
+G + Y
Sbjct: 74 PIGTWLLY 81
>U13876-8|AAN63396.1| 370|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 2, isoform e protein.
Length = 370
Score = 30.7 bits (66), Expect = 0.80
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 10 AVICSVSCNPLGQTTVCESTPNYALSSQLYPGLIPPSTTSVCETSPGNMLPMLPFPTIGA 69
++ C V N ++ EST + +S P + P+ +S+ +SP N+ P L +
Sbjct: 14 SINCIVGSNTSTSYSLDESTKRWISTSTKQPMSLIPTASSLVASSPPNLKPYLQLMRVDK 73
Query: 70 GLGYQMPY 77
+G + Y
Sbjct: 74 PIGTWLLY 81
>U13876-7|AAW88396.1| 427|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 2, isoform b protein.
Length = 427
Score = 30.7 bits (66), Expect = 0.80
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 10 AVICSVSCNPLGQTTVCESTPNYALSSQLYPGLIPPSTTSVCETSPGNMLPMLPFPTIGA 69
++ C V N ++ EST + +S P + P+ +S+ +SP N+ P L +
Sbjct: 14 SINCIVGSNTSTSYSLDESTKRWISTSTKQPMSLIPTASSLVASSPPNLKPYLQLMRVDK 73
Query: 70 GLGYQMPY 77
+G + Y
Sbjct: 74 PIGTWLLY 81
>AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical
protein F32D1.9 protein.
Length = 513
Score = 30.3 bits (65), Expect = 1.1
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 23 TTVCESTPNYALSSQLYPGLIPPSTTSVCETSPGNMLPMLPFPTIGAGLGYQMP--YPFG 80
T+V ++ P +SS L PG+ SV PG + L P +G P P G
Sbjct: 277 TSVADAPPGVDMSSDLPPGVESAPGASVAPLLPGGLDLNLGLPPLGFNPNMPPPGMPPMG 336
Query: 81 VGLGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGLSGFAGLP 122
+ + ++ PG + H+ G+ PG G A P
Sbjct: 337 M-MSTSLPPPGFAMPPPQFQQHSRAGFG----PGPVGAASAP 373
>Z46242-12|CAA86332.1| 690|Caenorhabditis elegans Hypothetical
protein F35G12.3b protein.
Length = 690
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 7/52 (13%)
Query: 126 MPALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVPNFM---SYGLPY 174
+P++SN+S+P+ + ET ++A R P +TTV NVP+ GLP+
Sbjct: 382 VPSISNISMPSGSGTVET--SVAPRLRP--KATTVVPNVPSISPVPPVGLPH 429
>Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical
protein F35G12.3a protein.
Length = 1077
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 7/52 (13%)
Query: 126 MPALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVPNFM---SYGLPY 174
+P++SN+S+P+ + ET ++A R P +TTV NVP+ GLP+
Sbjct: 382 VPSISNISMPSGSGTVET--SVAPRLRP--KATTVVPNVPSISPVPPVGLPH 429
>AF256467-1|AAF71546.1| 690|Caenorhabditis elegans SEL-5B
serine/threonine kinase protein.
Length = 690
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 7/52 (13%)
Query: 126 MPALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVPNFM---SYGLPY 174
+P++SN+S+P+ + ET ++A R P +TTV NVP+ GLP+
Sbjct: 382 VPSISNISMPSGSGTVET--SVAPRLRP--KATTVVPNVPSISPVPPVGLPH 429
>AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A
serine/threonine kinase protein.
Length = 1077
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 7/52 (13%)
Query: 126 MPALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVPNFM---SYGLPY 174
+P++SN+S+P+ + ET ++A R P +TTV NVP+ GLP+
Sbjct: 382 VPSISNISMPSGSGTVET--SVAPRLRP--KATTVVPNVPSISPVPPVGLPH 429
>AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen protein
104 protein.
Length = 281
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 9/44 (20%)
Query: 89 QPGSTVCETVSNGHTPLGYAGV-------GFPGLSGFAGLPSIP 125
+PG VC SN P G AG G PGL+G AG P +P
Sbjct: 78 RPGECVCN--SNSACPPGEAGPQGIPGHDGTPGLAGDAGAPGLP 119
>Z77663-2|CAB01209.1| 215|Caenorhabditis elegans Hypothetical
protein F53F4.2 protein.
Length = 215
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 166 NFMSYGLPYGYGFPIGINPVGGATTVCEPTVHGYGVGL 203
++ SYG+ GYG+ G +GGA C G G+G+
Sbjct: 150 SYPSYGMGMGYGYAAGYPMMGGAGGAC---CGGTGMGM 184
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 111 GFPGLSGFAGLPSIP 125
GFPGL G AGLP +P
Sbjct: 830 GFPGLKGDAGLPGLP 844
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 82 GLGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGL------SGFAGLPSIP 125
GL GQPG ++ V P GFPGL SG +GLP P
Sbjct: 1258 GLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKGESGLSGLPGAP 1307
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 76 PYPFGV-GLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSI 124
P P G GL G PG + + P+G G G+PG G AGLP +
Sbjct: 613 PGPPGYPGLKGENGFPGQPGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGL 663
Score = 27.9 bits (59), Expect = 5.7
Identities = 34/99 (34%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 44 PPSTTSVCETSPGNM-LPMLPFPTIGAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSNGH 102
P V PG LP LP T G G GY P VG G PG +
Sbjct: 717 PAPENQVNPAPPGQPGLPGLP-GTKGEG-GYP-GRPGEVGQPGFPGLPGMKGDSGLPGPP 773
Query: 103 TPLGYAGV-GFPGLSGFAGLPSIPMPA--LSNLSVPAVN 138
G+ GV G G G GLP IP P + N +P +N
Sbjct: 774 GLPGHPGVPGDKGFGGVPGLPGIPGPKGDVGNPGLPGLN 812
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 76 PYPFG-VGLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSIPMP 127
P P G +G G PG E + G G+ G PG+SG +G+P +P P
Sbjct: 392 PGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGIPGLPGP 445
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 82 GLGFTMGQPGSTVCETVSNGHTPLGYAGVG---FPGLSGFAGLPSIP-MPALSNL 132
GL G+PG + GY G FPG G GLP +P P L +
Sbjct: 659 GLPGLSGKPGQDGLPGLPGNKGEAGYGQPGQPGFPGAKGDGGLPGLPGTPGLQGM 713
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 111 GFPGLSGFAGLPSIP 125
GFPGL G AGLP +P
Sbjct: 829 GFPGLKGDAGLPGLP 843
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 82 GLGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGL------SGFAGLPSIP 125
GL GQPG ++ V P GFPGL SG +GLP P
Sbjct: 1257 GLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKGESGLSGLPGAP 1306
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 76 PYPFGV-GLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSI 124
P P G GL G PG + + P+G G G+PG G AGLP +
Sbjct: 612 PGPPGYPGLKGENGFPGQPGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGL 662
Score = 27.9 bits (59), Expect = 5.7
Identities = 34/99 (34%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 44 PPSTTSVCETSPGNM-LPMLPFPTIGAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSNGH 102
P V PG LP LP T G G GY P VG G PG +
Sbjct: 716 PAPENQVNPAPPGQPGLPGLP-GTKGEG-GYP-GRPGEVGQPGFPGLPGMKGDSGLPGPP 772
Query: 103 TPLGYAGV-GFPGLSGFAGLPSIPMPA--LSNLSVPAVN 138
G+ GV G G G GLP IP P + N +P +N
Sbjct: 773 GLPGHPGVPGDKGFGGVPGLPGIPGPKGDVGNPGLPGLN 811
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 76 PYPFG-VGLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSIPMP 127
P P G +G G PG E + G G+ G PG+SG +G+P +P P
Sbjct: 391 PGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGIPGLPGP 444
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 82 GLGFTMGQPGSTVCETVSNGHTPLGYAGVG---FPGLSGFAGLPSIP-MPALSNL 132
GL G+PG + GY G FPG G GLP +P P L +
Sbjct: 658 GLPGLSGKPGQDGLPGLPGNKGEAGYGQPGQPGFPGAKGDGGLPGLPGTPGLQGM 712
>U70847-2|AAB09105.2| 185|Caenorhabditis elegans Hypothetical
protein K09B3.1 protein.
Length = 185
Score = 29.1 bits (62), Expect = 2.5
Identities = 31/109 (28%), Positives = 41/109 (37%), Gaps = 10/109 (9%)
Query: 72 GYQMPYPFGVGLGFTMGQPGSTVCETV-SNGHTPLGYAGVGFPGLSGFAGLPSIPMPALS 130
GY Y G G+G+ MG P + V G P+ G G G G M
Sbjct: 31 GYGSGYGTGYGMGYGMGYPMNPYMNQVYGYGSNPMMSGGGGMYGAGGC-------MDLSP 83
Query: 131 NLSVPAVNSVCETIPNIASR--ALPVGGSTTVCENVPNFMSYGLPYGYG 177
SV A C T P + + A+ G +T + + SY GYG
Sbjct: 84 QCSVWASTGQCSTNPMMMRQTCAMSCGTCSTGVGALGSMGSYNPFGGYG 132
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 111 GFPGLSGFAGLPSIP 125
GFPGL G AGLP +P
Sbjct: 829 GFPGLKGDAGLPGLP 843
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 82 GLGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGL------SGFAGLPSIP 125
GL GQPG ++ V P GFPGL SG +GLP P
Sbjct: 1257 GLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKGESGLSGLPGAP 1306
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 76 PYPFGV-GLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSI 124
P P G GL G PG + + P+G G G+PG G AGLP +
Sbjct: 612 PGPPGYPGLKGENGFPGQPGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGL 662
Score = 27.9 bits (59), Expect = 5.7
Identities = 34/99 (34%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 44 PPSTTSVCETSPGNM-LPMLPFPTIGAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSNGH 102
P V PG LP LP T G G GY P VG G PG +
Sbjct: 716 PAPENQVNPAPPGQPGLPGLP-GTKGEG-GYP-GRPGEVGQPGFPGLPGMKGDSGLPGPP 772
Query: 103 TPLGYAGV-GFPGLSGFAGLPSIPMPA--LSNLSVPAVN 138
G+ GV G G G GLP IP P + N +P +N
Sbjct: 773 GLPGHPGVPGDKGFGGVPGLPGIPGPKGDVGNPGLPGLN 811
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 76 PYPFG-VGLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSIPMP 127
P P G +G G PG E + G G+ G PG+SG +G+P +P P
Sbjct: 391 PGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGIPGLPGP 444
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 82 GLGFTMGQPGSTVCETVSNGHTPLGYAGVG---FPGLSGFAGLPSIP-MPALSNL 132
GL G+PG + GY G FPG G GLP +P P L +
Sbjct: 658 GLPGLSGKPGQDGLPGLPGNKGEAGYGQPGQPGFPGAKGDGGLPGLPGTPGLQGM 712
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 111 GFPGLSGFAGLPSIP 125
GFPGL G AGLP +P
Sbjct: 830 GFPGLKGDAGLPGLP 844
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 82 GLGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGL------SGFAGLPSIP 125
GL GQPG ++ V P GFPGL SG +GLP P
Sbjct: 1258 GLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKGESGLSGLPGAP 1307
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 76 PYPFGV-GLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSI 124
P P G GL G PG + + P+G G G+PG G AGLP +
Sbjct: 613 PGPPGYPGLKGENGFPGQPGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGL 663
Score = 27.9 bits (59), Expect = 5.7
Identities = 34/99 (34%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 44 PPSTTSVCETSPGNM-LPMLPFPTIGAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSNGH 102
P V PG LP LP T G G GY P VG G PG +
Sbjct: 717 PAPENQVNPAPPGQPGLPGLP-GTKGEG-GYP-GRPGEVGQPGFPGLPGMKGDSGLPGPP 773
Query: 103 TPLGYAGV-GFPGLSGFAGLPSIPMPA--LSNLSVPAVN 138
G+ GV G G G GLP IP P + N +P +N
Sbjct: 774 GLPGHPGVPGDKGFGGVPGLPGIPGPKGDVGNPGLPGLN 812
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 76 PYPFG-VGLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSIPMP 127
P P G +G G PG E + G G+ G PG+SG +G+P +P P
Sbjct: 392 PGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGIPGLPGP 445
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 82 GLGFTMGQPGSTVCETVSNGHTPLGYAGVG---FPGLSGFAGLPSIP-MPALSNL 132
GL G+PG + GY G FPG G GLP +P P L +
Sbjct: 659 GLPGLSGKPGQDGLPGLPGNKGEAGYGQPGQPGFPGAKGDGGLPGLPGTPGLQGM 713
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 111 GFPGLSGFAGLPSIP 125
GFPGL G AGLP +P
Sbjct: 866 GFPGLKGDAGLPGLP 880
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 82 GLGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGL------SGFAGLPSIP 125
GL GQPG ++ V P GFPGL SG +GLP P
Sbjct: 1294 GLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKGESGLSGLPGAP 1343
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 76 PYPFGV-GLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSI 124
P P G GL G PG + + P+G G G+PG G AGLP +
Sbjct: 649 PGPPGYPGLKGENGFPGQPGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGL 699
Score = 27.9 bits (59), Expect = 5.7
Identities = 34/99 (34%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 44 PPSTTSVCETSPGNM-LPMLPFPTIGAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSNGH 102
P V PG LP LP T G G GY P VG G PG +
Sbjct: 753 PAPENQVNPAPPGQPGLPGLP-GTKGEG-GYP-GRPGEVGQPGFPGLPGMKGDSGLPGPP 809
Query: 103 TPLGYAGV-GFPGLSGFAGLPSIPMPA--LSNLSVPAVN 138
G+ GV G G G GLP IP P + N +P +N
Sbjct: 810 GLPGHPGVPGDKGFGGVPGLPGIPGPKGDVGNPGLPGLN 848
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 76 PYPFG-VGLGFTMGQPGSTVCETVSNGHTPLGYAGV-GFPGLSGFAGLPSIPMP 127
P P G +G G PG E + G G+ G PG+SG +G+P +P P
Sbjct: 428 PGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGIPGLPGP 481
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 82 GLGFTMGQPGSTVCETVSNGHTPLGYAGVG---FPGLSGFAGLPSIP-MPALSNL 132
GL G+PG + GY G FPG G GLP +P P L +
Sbjct: 695 GLPGLSGKPGQDGLPGLPGNKGEAGYGQPGQPGFPGAKGDGGLPGLPGTPGLQGM 749
>AL117200-6|CAB55058.1| 209|Caenorhabditis elegans Hypothetical
protein Y50E8A.10 protein.
Length = 209
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 125 PMPALSNLSVPAVNSVCETIPNIASRALPVG-GSTTVCENVPNF 167
P P+ +N PA NSV +T R+LPVG C+++P F
Sbjct: 169 PAPSYTNPGTPAANSVPDT---ANPRSLPVGIPGAPGCQSMPAF 209
>Z29117-13|CAA82377.2| 435|Caenorhabditis elegans Hypothetical
protein C48B4.2 protein.
Length = 435
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 33 ALSSQLYPGLIPPSTTSVCETSPGNMLPMLPFP 65
A+S+ LYP PPS V +SPG + + FP
Sbjct: 399 AVSNSLYPTTSPPSILIVLCSSPGFPILSMGFP 431
>AL132860-17|CAB60516.1| 497|Caenorhabditis elegans Hypothetical
protein Y56A3A.17b protein.
Length = 497
Score = 28.3 bits (60), Expect = 4.3
Identities = 28/113 (24%), Positives = 40/113 (35%), Gaps = 5/113 (4%)
Query: 19 PLGQTTVCESTPNYALSSQLYPGLIPPSTTSVCETSPGNMLPMLPFPTIGAGLGYQMPYP 78
P + +STP S L P +S+ SP P++ F A P P
Sbjct: 254 PSEEPKAADSTPKLTFGSPKEADL-PKPASSLFGASPSK--PLV-FGGSSADSTTSAPKP 309
Query: 79 FGVGLGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGLSGFAGLPSIPMPALSN 131
F L GS+ T + PL + G S F+G + A+ N
Sbjct: 310 FSA-LSTAASLFGSSSASTTTTATQPLSFGSSSTGGSSLFSGFAGLAQKAMEN 361
>AL132860-16|CAB60499.1| 512|Caenorhabditis elegans Hypothetical
protein Y56A3A.17a protein.
Length = 512
Score = 28.3 bits (60), Expect = 4.3
Identities = 28/113 (24%), Positives = 40/113 (35%), Gaps = 5/113 (4%)
Query: 19 PLGQTTVCESTPNYALSSQLYPGLIPPSTTSVCETSPGNMLPMLPFPTIGAGLGYQMPYP 78
P + +STP S L P +S+ SP P++ F A P P
Sbjct: 269 PSEEPKAADSTPKLTFGSPKEADL-PKPASSLFGASPSK--PLV-FGGSSADSTTSAPKP 324
Query: 79 FGVGLGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGLSGFAGLPSIPMPALSN 131
F L GS+ T + PL + G S F+G + A+ N
Sbjct: 325 FSA-LSTAASLFGSSSASTTTTATQPLSFGSSSTGGSSLFSGFAGLAQKAMEN 376
>Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical
protein B0272.3 protein.
Length = 309
Score = 27.5 bits (58), Expect = 7.5
Identities = 28/117 (23%), Positives = 41/117 (35%), Gaps = 3/117 (2%)
Query: 93 TVCETVSNGHTPLGYAGVGFPGLSGFAGLPSI-PMPALSNLSVPAVNSVCE-TIPNIASR 150
T T + L G+ S F GL P+P + L V + T +
Sbjct: 136 TTLITTNTSSLRLADIGLNLKDKSRFGGLHFFNPVPMMKLLEVVRHTETSDATFNQLVDY 195
Query: 151 ALPVGGSTTVCENVPNFMSYGLPYGYGF-PIGINPVGGATTVCEPTVHGYGVGLPFG 206
VG +T C++ P F+ L Y F + + G A+ G G P G
Sbjct: 196 GKTVGKTTVACKDTPGFIVNRLLVPYMFEALRLYERGDASMEDIDVAMKLGAGYPMG 252
>Z35600-2|CAA84663.1| 394|Caenorhabditis elegans Hypothetical
protein F37A8.2 protein.
Length = 394
Score = 27.5 bits (58), Expect = 7.5
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 14 SVSCNPLGQTTVCESTPNYALSSQL--YPGLIPPSTTSVCETSPGNMLPML-PFPTIGAG 70
S S NP+ +T+ S N +LSS + + S T V E S M+ ++ P G
Sbjct: 242 SASSNPIKETSDSSSETNCSLSSGTVSFNHRMLNSLTPVAENSVAIMMVLVEPVEVYGIV 301
Query: 71 LGY-QMPYPFGVGLGFTMG----QPGSTVCETVSNGHTPLGY 107
Y +M +P L +G + + + V+NG G+
Sbjct: 302 HSYVKMSFPLNTNLAKALGAMLHRKKKVLGDNVANGQLYFGF 343
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.5 bits (58), Expect = 7.5
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 84 GFTMGQPGSTVCETVSNGHTPL--GYAGVGFPGLSGFAGLPSI-PMPALSNLSVPAVNSV 140
G T+ QP STV + S+G T G G S L S P+P+ S P+ +
Sbjct: 1214 GSTVTQP-STVRGSTSSGSTVTTGSTEGSSTSGSSSATSLSSSSPVPSTSQSPNPSTSGS 1272
Query: 141 CETIPNIASRALPVGGSTT 159
PN + PV +TT
Sbjct: 1273 STPTPNPSQSTSPVVSTTT 1291
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 27.5 bits (58), Expect = 7.5
Identities = 34/151 (22%), Positives = 48/151 (31%), Gaps = 5/151 (3%)
Query: 61 MLPFPTIGAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSNGHTPLGYAG-VGFPGLSGFA 119
++ F + + +P G G G P + C G L + P L G
Sbjct: 5 IIAFAAVSVAHAFLLPSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGG 64
Query: 120 GLPSIPMPALSNLSVPAVNSVCETIPNIASRALPVGGSTTVCENVPNFMSYG-LPYGYGF 178
G P PA V + P+GG + P YG P G G
Sbjct: 65 GCCPPPAPACGGGCGGGVAPAPIGGGYAQAPQAPIGGGYAAPQ-APIGGGYGGAPIGGGS 123
Query: 179 PIGINPVGGATTVCEPTVHGYGVGLPFGRSF 209
G P+GG + GY P G ++
Sbjct: 124 YAGAGPIGGGAPIGGGA--GYAGAAPAGGAY 152
>J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein.
Length = 324
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 104 PLGYAGV-GFPGLSGFAGLPSIPMPALSNLSVPAVNSV-CETIP 145
P G GV G PGL G GL +P ++ VP SV C T P
Sbjct: 128 PSGPKGVPGVPGLDGVPGLDGVPGVGADDI-VPQRESVGCFTCP 170
>Z81530-3|CAB04307.1| 64|Caenorhabditis elegans Hypothetical
protein F36D1.4 protein.
Length = 64
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Query: 170 YGLPYGYGF--PIGINPVG 186
YG PYGYG+ P + PVG
Sbjct: 21 YGSPYGYGYASPAYVQPVG 39
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 27.1 bits (57), Expect = 9.9
Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 10/112 (8%)
Query: 14 SVSCNPLGQTTVCESTPNYALSSQLYPGLIPPSTTSVCETSPGNMLPMLPFPTIGAGLGY 73
S + P+G +TV + + +A +S + V P + M P T GA G+
Sbjct: 287 STTVGPVGPSTVPQQSQQFANNSMFMAN----AGNFVQNAFPIGVT-MTPQATFGAAPGF 341
Query: 74 QMPYPFGVGLGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGLSGFAGLPSIP 125
QM P L M QP T V+NG P P P +P
Sbjct: 342 QMMQPHQHNL--FMQQPNPTF---VNNGTNPFLQTQATLPNFVQNGTAPLVP 388
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 27.1 bits (57), Expect = 9.9
Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 10/112 (8%)
Query: 14 SVSCNPLGQTTVCESTPNYALSSQLYPGLIPPSTTSVCETSPGNMLPMLPFPTIGAGLGY 73
S + P+G +TV + + +A +S + V P + M P T GA G+
Sbjct: 315 STTVGPVGPSTVPQQSQQFANNSMFMAN----AGNFVQNAFPIGVT-MTPQATFGAAPGF 369
Query: 74 QMPYPFGVGLGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGLSGFAGLPSIP 125
QM P L M QP T V+NG P P P +P
Sbjct: 370 QMMQPHQHNL--FMQQPNPTF---VNNGTNPFLQTQATLPNFVQNGTAPLVP 416
>Z49132-2|CAA88982.1| 64|Caenorhabditis elegans Hypothetical
protein ZK666.2 protein.
Length = 64
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Query: 170 YGLPYGYGF--PIGINPVG 186
YG PYGYG+ P + PVG
Sbjct: 21 YGSPYGYGYASPAYVQPVG 39
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 27.1 bits (57), Expect = 9.9
Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 10/112 (8%)
Query: 14 SVSCNPLGQTTVCESTPNYALSSQLYPGLIPPSTTSVCETSPGNMLPMLPFPTIGAGLGY 73
S + P+G +TV + + +A +S + V P + M P T GA G+
Sbjct: 287 STTVGPVGPSTVPQQSQQFANNSMFMAN----AGNFVQNAFPIGVT-MTPQATFGAAPGF 341
Query: 74 QMPYPFGVGLGFTMGQPGSTVCETVSNGHTPLGYAGVGFPGLSGFAGLPSIP 125
QM P L M QP T V+NG P P P +P
Sbjct: 342 QMMQPHQHNL--FMQQPNPTF---VNNGTNPFLQTQATLPNFVQNGTAPLVP 388
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 27.1 bits (57), Expect = 9.9
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 68 GAGLGYQMPYPFGVGLGFTMGQPGSTVCETVSNGHT-PLGYAGVGFPGLSGFAGLPSIPM 126
G G G+ + VG G+ G G C+ + +T P G G PG +G GLP P
Sbjct: 104 GYGGGHGGGHGGAVGGGYGGGGGGGGGCQCSPSSNTCPPGPRGP--PGQAGLDGLPGAPG 161
Query: 127 PALSN 131
SN
Sbjct: 162 QPGSN 166
>AF016451-13|AAB65994.1| 317|Caenorhabditis elegans Hypothetical
protein C03A7.13 protein.
Length = 317
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 144 IPNIAS-RALPVGGSTTVCENVPNFMSYGLPYGYGFPI 180
+P+IA+ ALP+ TV +PN S +P Y F +
Sbjct: 156 VPSIATFNALPLLSIQTVTMGLPNIASQDVPLFYSFDL 193
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.140 0.450
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,297,387
Number of Sequences: 27539
Number of extensions: 315709
Number of successful extensions: 1270
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 885
Number of HSP's gapped (non-prelim): 378
length of query: 210
length of database: 12,573,161
effective HSP length: 78
effective length of query: 132
effective length of database: 10,425,119
effective search space: 1376115708
effective search space used: 1376115708
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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