GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001700-TA|BGIBMGA001700-PA|IPR003749|ThiamineS
         (109 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   0.92 
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    20   4.9  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          20   4.9  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       20   4.9  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    20   6.5  
AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase l...    20   6.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    19   8.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    19   8.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    19   8.6  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 0.92
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 52  WLKDNLLVEREELFLKDDSVR 72
           WLKD   ++  E  L+ +SVR
Sbjct: 361 WLKDGHPIDHNEAVLRIESVR 381


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 7/25 (28%), Positives = 16/25 (64%)

Query: 39  SQNQNWTLKELLIWLKDNLLVEREE 63
           +QN N T +++ IW ++  +  ++E
Sbjct: 119 AQNLNLTERQIKIWFQNRRMKFKKE 143


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 7/25 (28%), Positives = 16/25 (64%)

Query: 39  SQNQNWTLKELLIWLKDNLLVEREE 63
           +QN N T +++ IW ++  +  ++E
Sbjct: 139 AQNLNLTERQIKIWFQNRRMKFKKE 163


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 91  NYELKENDKIMFISTLHG 108
           NYE+ E+  +M    +HG
Sbjct: 153 NYEVDESASVMTNGRIHG 170


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 16/55 (29%), Positives = 19/55 (34%)

Query: 30  PPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINEEDW 84
           P L T+  D +NQ  T  EL           R    LKD   R  + V      W
Sbjct: 231 PLLFTYTDDGKNQQRTGTELTKMRPKRQSSRRHRKNLKDPCRRRQMYVDFGSVGW 285


>AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase like
           protein E4 protein.
          Length = 138

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 62  EELFLKDDSVRPGILVLINEEDWELHGQLNYELKE 96
           E++ L   + R GI+  ++ ED +L    N  LKE
Sbjct: 102 EDIVLVSINYRIGIIGFLSLEDPDLEVPGNAGLKE 136


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)

Query: 84  WELHGQLNYELKEN 97
           W+ HG++ Y  K N
Sbjct: 327 WDEHGKVPYAYKGN 340


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 5/10 (50%), Positives = 10/10 (100%)

Query: 75  ILVLINEEDW 84
           ILV+++E++W
Sbjct: 153 ILVIVSEQEW 162


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 5/10 (50%), Positives = 10/10 (100%)

Query: 75  ILVLINEEDW 84
           ILV+++E++W
Sbjct: 171 ILVIVSEQEW 180


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.139    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,648
Number of Sequences: 317
Number of extensions: 1115
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 109
length of database: 114,650
effective HSP length: 49
effective length of query: 60
effective length of database: 99,117
effective search space:  5947020
effective search space used:  5947020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
S2: 38 (19.4 bits)