BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001700-TA|BGIBMGA001700-PA|IPR003749|ThiamineS
(109 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003581-1|AAH03581.1| 101|Homo sapiens ubiquitin related modif... 132 3e-31
AL359091-10|CAI13493.1| 101|Homo sapiens chromosome 9 open read... 132 3e-31
AL359091-9|CAI13492.1| 63|Homo sapiens chromosome 9 open readi... 71 6e-13
D30655-1|BAA06336.1| 407|Homo sapiens eukaryotic initiation fac... 28 5.2
BT009860-1|AAP88862.1| 407|Homo sapiens eukaryotic translation ... 28 5.2
BC048105-1|AAH48105.1| 408|Homo sapiens eukaryotic translation ... 28 5.2
BC016295-1|AAH16295.1| 179|Homo sapiens EIF4A2 protein protein. 28 5.2
BC015842-1|AAH15842.1| 407|Homo sapiens eukaryotic translation ... 28 5.2
BC013708-1|AAH13708.1| 407|Homo sapiens eukaryotic translation ... 28 5.2
BC012547-1|AAH12547.1| 408|Homo sapiens eukaryotic translation ... 28 5.2
U67156-1|AAC50894.1| 1374|Homo sapiens mitogen-activated kinase ... 28 6.9
D84476-1|BAA12684.2| 1374|Homo sapiens apoptosis signal-regulati... 28 6.9
BC088829-1|AAH88829.1| 1374|Homo sapiens mitogen-activated prote... 28 6.9
BC054503-1|AAH54503.1| 1374|Homo sapiens mitogen-activated prote... 28 6.9
AL121933-1|CAI15470.1| 1374|Homo sapiens mitogen-activated prote... 28 6.9
AL024508-2|CAI20176.1| 1374|Homo sapiens mitogen-activated prote... 28 6.9
AB209093-1|BAD92330.1| 1455|Homo sapiens mitogen-activated prote... 28 6.9
DQ470474-1|ABF00125.1| 747|Homo sapiens scaffold attachment fac... 27 9.1
AL136577-1|CAB66512.2| 769|Homo sapiens hypothetical protein pr... 27 9.1
AF328905-1|AAK82337.1| 746|Homo sapiens stromal interaction mol... 27 9.1
AB040915-1|BAA96006.1| 818|Homo sapiens KIAA1482 protein protein. 27 9.1
>BC003581-1|AAH03581.1| 101|Homo sapiens ubiquitin related modifier
1 homolog (S. cerevisiae) protein.
Length = 101
Score = 132 bits (318), Expect = 3e-31
Identities = 62/109 (56%), Positives = 81/109 (74%), Gaps = 8/109 (7%)
Query: 1 MAETLTVEVMFGGGAELLFNKVKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVE 60
MA L+VEV FGGGAELLF+ +K+ + LP Q + W ++ LLIW+K NLL E
Sbjct: 1 MAAPLSVEVEFGGGAELLFDGIKKHRVTLP--------GQEEPWDIRNLLIWIKKNLLKE 52
Query: 61 REELFLKDDSVRPGILVLINEEDWELHGQLNYELKENDKIMFISTLHGG 109
R ELF++ DSVRPGILVLIN+ DWEL G+L+Y+L++ D ++FISTLHGG
Sbjct: 53 RPELFIQGDSVRPGILVLINDADWELLGELDYQLQDQDSVLFISTLHGG 101
>AL359091-10|CAI13493.1| 101|Homo sapiens chromosome 9 open reading
frame 74 protein.
Length = 101
Score = 132 bits (318), Expect = 3e-31
Identities = 62/109 (56%), Positives = 81/109 (74%), Gaps = 8/109 (7%)
Query: 1 MAETLTVEVMFGGGAELLFNKVKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVE 60
MA L+VEV FGGGAELLF+ +K+ + LP Q + W ++ LLIW+K NLL E
Sbjct: 1 MAAPLSVEVEFGGGAELLFDGIKKHRVTLP--------GQEEPWDIRNLLIWIKKNLLKE 52
Query: 61 REELFLKDDSVRPGILVLINEEDWELHGQLNYELKENDKIMFISTLHGG 109
R ELF++ DSVRPGILVLIN+ DWEL G+L+Y+L++ D ++FISTLHGG
Sbjct: 53 RPELFIQGDSVRPGILVLINDADWELLGELDYQLQDQDSVLFISTLHGG 101
>AL359091-9|CAI13492.1| 63|Homo sapiens chromosome 9 open
reading frame 74 protein.
Length = 63
Score = 71.3 bits (167), Expect = 6e-13
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 8/71 (11%)
Query: 1 MAETLTVEVMFGGGAELLFNKVKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVE 60
MA L+VEV FGGGAELLF+ +K+ + LP Q + W ++ LLIW+K NLL E
Sbjct: 1 MAAPLSVEVEFGGGAELLFDGIKKHRVTLP--------GQEEPWDIRNLLIWIKKNLLKE 52
Query: 61 REELFLKDDSV 71
R ELF++ DSV
Sbjct: 53 RPELFIQGDSV 63
>D30655-1|BAA06336.1| 407|Homo sapiens eukaryotic initiation factor
4AII protein.
Length = 407
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 22 VKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINE 81
VK++E+ L +K F + + + W L + L L + L + + +FL + ++
Sbjct: 237 VKKEELTLEGIKQFYINVEREEWKL-DTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 295
Query: 82 EDW---ELHGQLNYELKENDKIM 101
D+ LHG + + KE D IM
Sbjct: 296 RDFTVSALHGDM--DQKERDVIM 316
>BT009860-1|AAP88862.1| 407|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 2 protein.
Length = 407
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 22 VKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINE 81
VK++E+ L +K F + + + W L + L L + L + + +FL + ++
Sbjct: 237 VKKEELTLEGIKQFYINVEREEWKL-DTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 295
Query: 82 EDW---ELHGQLNYELKENDKIM 101
D+ LHG + + KE D IM
Sbjct: 296 RDFTVSALHGDM--DQKERDVIM 316
>BC048105-1|AAH48105.1| 408|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 2 protein.
Length = 408
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 22 VKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINE 81
VK++E+ L +K F + + + W L + L L + L + + +FL + ++
Sbjct: 238 VKKEELTLEGIKQFYINVEREEWKL-DTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 296
Query: 82 EDW---ELHGQLNYELKENDKIM 101
D+ LHG + + KE D IM
Sbjct: 297 RDFTVSALHGDM--DQKERDVIM 317
>BC016295-1|AAH16295.1| 179|Homo sapiens EIF4A2 protein protein.
Length = 179
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 22 VKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINE 81
VK++E+ L +K F + + + W L + L L + L + + +FL + ++
Sbjct: 9 VKKEELTLEGIKQFYINVEREEWKL-DTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 67
Query: 82 EDW---ELHGQLNYELKENDKIM 101
D+ LHG + + KE D IM
Sbjct: 68 RDFTVSALHGDM--DQKERDVIM 88
>BC015842-1|AAH15842.1| 407|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 2 protein.
Length = 407
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 22 VKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINE 81
VK++E+ L +K F + + + W L + L L + L + + +FL + ++
Sbjct: 237 VKKEELTLEGIKQFYINVEREEWKL-DTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 295
Query: 82 EDW---ELHGQLNYELKENDKIM 101
D+ LHG + + KE D IM
Sbjct: 296 RDFTVSALHGDM--DQKERDVIM 316
>BC013708-1|AAH13708.1| 407|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 2 protein.
Length = 407
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 22 VKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINE 81
VK++E+ L +K F + + + W L + L L + L + + +FL + ++
Sbjct: 237 VKKEELTLEGIKQFYINVEREEWKL-DTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 295
Query: 82 EDW---ELHGQLNYELKENDKIM 101
D+ LHG + + KE D IM
Sbjct: 296 RDFTVSALHGDM--DQKERDVIM 316
>BC012547-1|AAH12547.1| 408|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 2 protein.
Length = 408
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 22 VKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINE 81
VK++E+ L +K F + + + W L + L L + L + + +FL + ++
Sbjct: 238 VKKEELTLEGIKQFYINVEREEWKL-DTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 296
Query: 82 EDW---ELHGQLNYELKENDKIM 101
D+ LHG + + KE D IM
Sbjct: 297 RDFTVSALHGDM--DQKERDVIM 317
>U67156-1|AAC50894.1| 1374|Homo sapiens mitogen-activated kinase
kinase kinase 5 protein.
Length = 1374
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 16 ELLFNKVKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVERE-ELFLKDDSVRPG 74
E+ K+K + I +P L F +S N EL WL+ N E FL +D
Sbjct: 1280 EIKHLKLKSQPIEIPELPVFHLNSSGTNTEDSELTDWLRVNGADEDTISRFLAEDYTLLD 1339
Query: 75 ILVLINEED 83
+L + +D
Sbjct: 1340 VLYYVTRDD 1348
>D84476-1|BAA12684.2| 1374|Homo sapiens apoptosis signal-regulating
kinase 1 protein.
Length = 1374
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 16 ELLFNKVKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVERE-ELFLKDDSVRPG 74
E+ K+K + I +P L F +S N EL WL+ N E FL +D
Sbjct: 1280 EIKHLKLKSQPIEIPELPVFHLNSSGTNTEDSELTDWLRVNGADEDTISRFLAEDYTLLD 1339
Query: 75 ILVLINEED 83
+L + +D
Sbjct: 1340 VLYYVTRDD 1348
>BC088829-1|AAH88829.1| 1374|Homo sapiens mitogen-activated protein
kinase kinase kinase 5 protein.
Length = 1374
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 16 ELLFNKVKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVERE-ELFLKDDSVRPG 74
E+ K+K + I +P L F +S N EL WL+ N E FL +D
Sbjct: 1280 EIKHLKLKSQPIEIPELPVFHLNSSGTNTEDSELTDWLRVNGADEDTISRFLAEDYTLLD 1339
Query: 75 ILVLINEED 83
+L + +D
Sbjct: 1340 VLYYVTRDD 1348
>BC054503-1|AAH54503.1| 1374|Homo sapiens mitogen-activated protein
kinase kinase kinase 5 protein.
Length = 1374
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 16 ELLFNKVKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVERE-ELFLKDDSVRPG 74
E+ K+K + I +P L F +S N EL WL+ N E FL +D
Sbjct: 1280 EIKHLKLKSQPIEIPELPVFHLNSSGTNTEDSELTDWLRVNGADEDTISRFLAEDYTLLD 1339
Query: 75 ILVLINEED 83
+L + +D
Sbjct: 1340 VLYYVTRDD 1348
>AL121933-1|CAI15470.1| 1374|Homo sapiens mitogen-activated protein
kinase kinase kinase 5 protein.
Length = 1374
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 16 ELLFNKVKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVERE-ELFLKDDSVRPG 74
E+ K+K + I +P L F +S N EL WL+ N E FL +D
Sbjct: 1280 EIKHLKLKSQPIEIPELPVFHLNSSGTNTEDSELTDWLRVNGADEDTISRFLAEDYTLLD 1339
Query: 75 ILVLINEED 83
+L + +D
Sbjct: 1340 VLYYVTRDD 1348
>AL024508-2|CAI20176.1| 1374|Homo sapiens mitogen-activated protein
kinase kinase kinase 5 protein.
Length = 1374
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 16 ELLFNKVKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVERE-ELFLKDDSVRPG 74
E+ K+K + I +P L F +S N EL WL+ N E FL +D
Sbjct: 1280 EIKHLKLKSQPIEIPELPVFHLNSSGTNTEDSELTDWLRVNGADEDTISRFLAEDYTLLD 1339
Query: 75 ILVLINEED 83
+L + +D
Sbjct: 1340 VLYYVTRDD 1348
>AB209093-1|BAD92330.1| 1455|Homo sapiens mitogen-activated protein
kinase kinase kinase 5 variant protein.
Length = 1455
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 16 ELLFNKVKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVERE-ELFLKDDSVRPG 74
E+ K+K + I +P L F +S N EL WL+ N E FL +D
Sbjct: 1361 EIKHLKLKSQPIEIPELPVFHLNSSGTNTEDSELTDWLRVNGADEDTISRFLAEDYTLLD 1420
Query: 75 ILVLINEED 83
+L + +D
Sbjct: 1421 VLYYVTRDD 1429
>DQ470474-1|ABF00125.1| 747|Homo sapiens scaffold attachment factor
A2 protein.
Length = 747
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 60 EREELFLKDDSVRPGILVLINEEDWELHGQLNYELKEND 98
+R +L L R ++V+ NEEDW+ +L E++ +D
Sbjct: 545 QRRKLLLFKTFSRKVVVVVPNEEDWKKRLELRKEVEGDD 583
>AL136577-1|CAB66512.2| 769|Homo sapiens hypothetical protein
protein.
Length = 769
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 25 KEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVR 72
K I + L S+ NWTL++ L WL + + + + E +D++V+
Sbjct: 140 KHITIEDLWKRWKTSEVHNWTLEDTLQWLIEFVELPQYEKNFRDNNVK 187
>AF328905-1|AAK82337.1| 746|Homo sapiens stromal interaction
molecule 2 protein.
Length = 746
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 25 KEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVR 72
K I + L S+ NWTL++ L WL + + + + E +D++V+
Sbjct: 117 KHITIEDLWKRWKTSEVHNWTLEDTLQWLIEFVELPQYEKNFRDNNVK 164
>AB040915-1|BAA96006.1| 818|Homo sapiens KIAA1482 protein protein.
Length = 818
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 25 KEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVR 72
K I + L S+ NWTL++ L WL + + + + E +D++V+
Sbjct: 189 KHITIEDLWKRWKTSEVHNWTLEDTLQWLIEFVELPQYEKNFRDNNVK 236
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.318 0.139 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,187,088
Number of Sequences: 224733
Number of extensions: 683255
Number of successful extensions: 1305
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1295
Number of HSP's gapped (non-prelim): 21
length of query: 109
length of database: 73,234,838
effective HSP length: 79
effective length of query: 30
effective length of database: 55,480,931
effective search space: 1664427930
effective search space used: 1664427930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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