Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001700-TA|BGIBMGA001700-PA|IPR003749|ThiamineS
(109 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23529-5|AAL32212.2| 385|Caenorhabditis elegans Hypothetical pr... 29 0.70
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 28 1.2
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 28 1.6
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 28 1.6
Z75553-5|CAA99950.2| 533|Caenorhabditis elegans Hypothetical pr... 27 2.8
Z74472-7|CAA98944.1| 182|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical p... 27 3.7
Z35400-1|CAA84584.1| 532|Caenorhabditis elegans putative transp... 26 4.9
U12433-1|AAA20582.1| 532|Caenorhabditis elegans putative transp... 26 4.9
Z92790-4|CAB07227.2| 227|Caenorhabditis elegans Hypothetical pr... 26 6.5
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 26 6.5
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 26 6.5
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 26 6.5
Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 25 8.6
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 25 8.6
U88184-7|AAK31516.1| 576|Caenorhabditis elegans Hypothetical pr... 25 8.6
AC024843-3|AAF60838.1| 110|Caenorhabditis elegans Hypothetical ... 25 8.6
>U23529-5|AAL32212.2| 385|Caenorhabditis elegans Hypothetical
protein C15B12.8 protein.
Length = 385
Score = 29.1 bits (62), Expect = 0.70
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 58 LVEREELFLKDDSVRPGILVLINEEDWELHGQLNYELKENDKIMFI 103
L ++E F D+ PG + L+ +E +L G L++ K N +++ I
Sbjct: 249 LEKKEYFFALPDTDYPGAIKLVLDEGDDLAGDLSHPTKNNQELVTI 294
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical protein
C06E1.10 protein.
Length = 1148
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Query: 16 ELLFNKVKRKEIALPPLKTFLPDS--QNQNWTLKELLIWLKDNL 57
E+L NK+ KE+ ++ L + +N+NW L+E L W+ +++
Sbjct: 1082 EMLLNKLIEKEVTT---RSSLKEQWLKNENWLLEEYLEWVPESV 1122
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 27.9 bits (59), Expect = 1.6
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 22 VKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINE 81
VKR E+ L +K F + W + LI L D L + + LF + + E
Sbjct: 229 VKRDELTLEGIKQFFVAVDREEWKF-DTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKE 287
Query: 82 EDW---ELHGQLNYELKENDKIM 101
++ +HG + E K+ D++M
Sbjct: 288 ANFTVSSMHGDM--EQKDRDEVM 308
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 27.9 bits (59), Expect = 1.6
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 22 VKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINE 81
VKR E+ L +K F + W + LI L D L + + LF + + E
Sbjct: 229 VKRDELTLEGIKQFFVAVDREEWKF-DTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKE 287
Query: 82 EDW---ELHGQLNYELKENDKIM 101
++ +HG + E K+ D++M
Sbjct: 288 ANFTVSSMHGDM--EQKDRDEVM 308
>Z75553-5|CAA99950.2| 533|Caenorhabditis elegans Hypothetical
protein ZC443.5 protein.
Length = 533
Score = 27.1 bits (57), Expect = 2.8
Identities = 24/70 (34%), Positives = 31/70 (44%)
Query: 22 VKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINE 81
+KR L KT L DS+ K +L K + +R L+D V P LVL +
Sbjct: 407 LKRHGGCLQYHKTMLGDSEQLLKAFKTVLTERKYSENAQRLARILRDQPVSPKDLVLKHC 466
Query: 82 EDWELHGQLN 91
E HG LN
Sbjct: 467 EFAVEHGALN 476
>Z74472-7|CAA98944.1| 182|Caenorhabditis elegans Hypothetical
protein F23H12.7 protein.
Length = 182
Score = 26.6 bits (56), Expect = 3.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 50 LIWLKDNLLVEREELFLKDDS 70
L+WL+DN++ R L DD+
Sbjct: 157 LLWLQDNMMAPRSALIKNDDN 177
>Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical
protein ZK1098.3 protein.
Length = 784
Score = 26.6 bits (56), Expect = 3.7
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 19 FNKVKRKEIALPP-LKTFL--PDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGI 75
++ + R +PP LK L P ++ +N K + N E E+L++ ++ + I
Sbjct: 363 YSNIDRNSKYMPPDLKEELENPTTEMKNGLEKLQALRTTKNCQEEDEQLYVFEEQKKYPI 422
Query: 76 LVLINEEDWELHGQLNYELKENDKIMFI 103
++ NE+D E+ L EL E ++ M+I
Sbjct: 423 RIVQNEQDLEI---LLSELGELEEGMYI 447
>Z35400-1|CAA84584.1| 532|Caenorhabditis elegans putative
transposase protein.
Length = 532
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 36 LPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINEEDWE 85
LP S+ + T+++ LKD E ++L ++ D +++EEDW+
Sbjct: 23 LPMSREETKTVEKFTRILKD---AETDDLLIQSDDEEEVFGGIVDEEDWK 69
>U12433-1|AAA20582.1| 532|Caenorhabditis elegans putative
transposase protein.
Length = 532
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 36 LPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINEEDWE 85
LP S+ + T+++ LKD E ++L ++ D +++EEDW+
Sbjct: 23 LPMSREETKTVEKFTRILKD---AETDDLLIQSDDEEEVFGGIVDEEDWK 69
>Z92790-4|CAB07227.2| 227|Caenorhabditis elegans Hypothetical
protein H03G16.5 protein.
Length = 227
Score = 25.8 bits (54), Expect = 6.5
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 22 VKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINE 81
++ KE + K L ++QN TL+E I L NL+ E+ KD +IN+
Sbjct: 92 IQNKEELIDKYKAMLENNQNHKNTLRE-TIQLYKNLIHRLLEIAAKDLETSQEQKGVINK 150
Query: 82 EDWELHGQLNYELKEND 98
EL ++ ++ND
Sbjct: 151 AFEELESTKSF-AQDND 166
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 25.8 bits (54), Expect = 6.5
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 69 DSVRPGILVLINEEDWELHGQLNYELKENDKIMFISTLHG 108
DS RPG VL+ HG ++Y+L+ N + TL G
Sbjct: 1599 DSTRPGTPVLVLNALH--HGTVSYKLEPNCTFFEVHTLSG 1636
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 25.8 bits (54), Expect = 6.5
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 69 DSVRPGILVLINEEDWELHGQLNYELKENDKIMFISTLHG 108
DS RPG VL+ HG ++Y+L+ N + TL G
Sbjct: 1599 DSTRPGTPVLVLNALH--HGTVSYKLEPNCTFFEVHTLSG 1636
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 25.8 bits (54), Expect = 6.5
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 69 DSVRPGILVLINEEDWELHGQLNYELKENDKIMFISTLHG 108
DS RPG VL+ HG ++Y+L+ N + TL G
Sbjct: 1599 DSTRPGTPVLVLNALH--HGTVSYKLEPNCTFFEVHTLSG 1636
>Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 25.4 bits (53), Expect = 8.6
Identities = 20/79 (25%), Positives = 37/79 (46%)
Query: 1 MAETLTVEVMFGGGAELLFNKVKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVE 60
+A+T++ MF GG L ++V R++ ++ + + + S LK + D+ V
Sbjct: 2322 LAQTISWFAMFTGGGNRLRDRVSRQDYSVSIIFSLVVVSMISITILKSDNSIISDSKSVS 2381
Query: 61 REELFLKDDSVRPGILVLI 79
+KD + G VLI
Sbjct: 2382 EFTFTIKDIAFGVGFGVLI 2400
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 25.4 bits (53), Expect = 8.6
Identities = 20/79 (25%), Positives = 37/79 (46%)
Query: 1 MAETLTVEVMFGGGAELLFNKVKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVE 60
+A+T++ MF GG L ++V R++ ++ + + + S LK + D+ V
Sbjct: 2322 LAQTISWFAMFTGGGNRLRDRVSRQDYSVSIIFSLVVVSMISITILKSDNSIISDSKSVS 2381
Query: 61 REELFLKDDSVRPGILVLI 79
+KD + G VLI
Sbjct: 2382 EFTFTIKDIAFGVGFGVLI 2400
>U88184-7|AAK31516.1| 576|Caenorhabditis elegans Hypothetical
protein F36H5.5 protein.
Length = 576
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 74 GILVL-INEEDWELHGQLNYELKENDKI 100
G LV + ++ +ELH + YEL EN KI
Sbjct: 481 GYLVFNLVDQLYELHAPVYYELSENTKI 508
>AC024843-3|AAF60838.1| 110|Caenorhabditis elegans Hypothetical
protein Y61A9LA.7 protein.
Length = 110
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Query: 29 LPPLKTFLPDSQNQNWTLKELLIWLKDN 56
+ PL TFL D+Q Q TL +L++ +D+
Sbjct: 1 MSPLTTFLTDAQQQ--TLHQLIVSARDS 26
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.139 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,876,431
Number of Sequences: 27539
Number of extensions: 112543
Number of successful extensions: 255
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 252
Number of HSP's gapped (non-prelim): 17
length of query: 109
length of database: 12,573,161
effective HSP length: 72
effective length of query: 37
effective length of database: 10,590,353
effective search space: 391843061
effective search space used: 391843061
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
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