BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001699-TA|BGIBMGA001699-PA|IPR003590|Leucine-rich repeat, ribonuclease inhibitor subtype, IPR009109|Ran-GTPase activating protein 1, C-terminal, IPR001611|Leucine-rich repeat (542 letters) Database: fruitfly 52,641 sequences; 24,830,863 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY061219-1|AAL28767.1| 596|Drosophila melanogaster LD16356p pro... 223 6e-58 AE014134-3098|AAF53801.1| 596|Drosophila melanogaster CG9999-PA... 223 6e-58 AF143860-1|AAD31518.1| 596|Drosophila melanogaster RanGAP protein. 221 2e-57 AE013599-481|AAF59205.2| 1399|Drosophila melanogaster CG1399-PB,... 38 0.035 AY058675-1|AAL13904.1| 772|Drosophila melanogaster LD38495p pro... 31 5.4 AE014297-2112|AAF55252.2| 772|Drosophila melanogaster CG4221-PA... 31 5.4 BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p pro... 30 7.1 AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA... 30 7.1 >AY061219-1|AAL28767.1| 596|Drosophila melanogaster LD16356p protein. Length = 596 Score = 223 bits (544), Expect = 6e-58 Identities = 127/297 (42%), Positives = 165/297 (55%), Gaps = 13/297 (4%) Query: 1 MATFDLNSLNTVLDEPAQPETGVDFSGKSLKLDTAKDAQQIVDAINKCPNLQYLALTGNT 60 M+TF+ S+ L + E G+ F K L +TA D Q +VDA+NK + YL L GNT Sbjct: 1 MSTFNFASMAAQLGQ----EQGISFENKVLSWNTAADVQDVVDALNKQTTVHYLNLDGNT 56 Query: 61 LGVTAAHAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLS 120 LGV AA AI + L+ HPE + A + +MFTGR+ +EIP AL LG +I AGA+L VLDLS Sbjct: 57 LGVEAAKAIGEGLKRHPEFRKALWKNMFTGRLISEIPEALKHLGAALIVAGAKLTVLDLS 116 Query: 121 DNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGGXXXXXXXXXXXXXX------- 173 DNA GP G+ GL +LL+S VC GG Sbjct: 117 DNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLHANANKAGFPL 176 Query: 174 --XVFIAGRNRLENDGATALAKVFQEMGSLEEIAMPQNGIYHVGITALSEAFKHNPALNH 231 VFI RNRLE+ GAT +A FQ + + EEI + QN IY G+ AL+E+FKHNP L Sbjct: 177 QLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRV 236 Query: 232 LNLNDNTXXXXXXXXXXXXLPRLKNLKSINFGDCLLKSRGARALAKAFKGNSLLLEV 288 LN+NDNT LP L L+ ++FGDCL+K+ GA +A + + LEV Sbjct: 237 LNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEV 293 >AE014134-3098|AAF53801.1| 596|Drosophila melanogaster CG9999-PA protein. Length = 596 Score = 223 bits (544), Expect = 6e-58 Identities = 127/297 (42%), Positives = 165/297 (55%), Gaps = 13/297 (4%) Query: 1 MATFDLNSLNTVLDEPAQPETGVDFSGKSLKLDTAKDAQQIVDAINKCPNLQYLALTGNT 60 M+TF+ S+ L + E G+ F K L +TA D Q +VDA+NK + YL L GNT Sbjct: 1 MSTFNFASMAAQLGQ----EQGISFENKVLSWNTAADVQDVVDALNKQTTVHYLNLDGNT 56 Query: 61 LGVTAAHAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLS 120 LGV AA AI + L+ HPE + A + +MFTGR+ +EIP AL LG +I AGA+L VLDLS Sbjct: 57 LGVEAAKAIGEGLKRHPEFRKALWKNMFTGRLISEIPEALKHLGAALIVAGAKLTVLDLS 116 Query: 121 DNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGGXXXXXXXXXXXXXX------- 173 DNA GP G+ GL +LL+S VC GG Sbjct: 117 DNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLHANANKAGFPL 176 Query: 174 --XVFIAGRNRLENDGATALAKVFQEMGSLEEIAMPQNGIYHVGITALSEAFKHNPALNH 231 VFI RNRLE+ GAT +A FQ + + EEI + QN IY G+ AL+E+FKHNP L Sbjct: 177 QLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRV 236 Query: 232 LNLNDNTXXXXXXXXXXXXLPRLKNLKSINFGDCLLKSRGARALAKAFKGNSLLLEV 288 LN+NDNT LP L L+ ++FGDCL+K+ GA +A + + LEV Sbjct: 237 LNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEV 293 >AF143860-1|AAD31518.1| 596|Drosophila melanogaster RanGAP protein. Length = 596 Score = 221 bits (540), Expect = 2e-57 Identities = 126/297 (42%), Positives = 165/297 (55%), Gaps = 13/297 (4%) Query: 1 MATFDLNSLNTVLDEPAQPETGVDFSGKSLKLDTAKDAQQIVDAINKCPNLQYLALTGNT 60 M+TF+ S+ L + E G+ F K L +TA D Q +VDA+NK + YL L GNT Sbjct: 1 MSTFNFASMAAQLGQ----EQGISFENKVLSWNTAADVQDVVDALNKQTTVHYLNLDGNT 56 Query: 61 LGVTAAHAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLS 120 LGV AA AI + L+ HPE + A + +MFTGR+ +EIP AL LG +I AGA+L VLDLS Sbjct: 57 LGVEAAKAIGEGLKRHPEFRKALWKNMFTGRLISEIPEALKHLGAALIVAGAKLTVLDLS 116 Query: 121 DNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGGXXXXXXXXXXXXXX------- 173 +NA GP G+ GL +LL+S VC GG Sbjct: 117 ENALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLHANANKAGFPL 176 Query: 174 --XVFIAGRNRLENDGATALAKVFQEMGSLEEIAMPQNGIYHVGITALSEAFKHNPALNH 231 VFI RNRLE+ GAT +A FQ + + EEI + QN IY G+ AL+E+FKHNP L Sbjct: 177 QLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRV 236 Query: 232 LNLNDNTXXXXXXXXXXXXLPRLKNLKSINFGDCLLKSRGARALAKAFKGNSLLLEV 288 LN+NDNT LP L L+ ++FGDCL+K+ GA +A + + LEV Sbjct: 237 LNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEV 293 >AE013599-481|AAF59205.2| 1399|Drosophila melanogaster CG1399-PB, isoform B protein. Length = 1399 Score = 37.9 bits (84), Expect = 0.035 Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 9/179 (5%) Query: 53 YLALTGNTLGVTAAHAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGA 112 YL L+ NTLG AH + + +++ + D+ + E+ P L+A+ Sbjct: 431 YLDLSSNTLGAQGAHVLESCIHG---VRVLQSLDISDNNLDAELAPVLTAISKNPSIRTL 487 Query: 113 RL--AVLDLSDNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGGXXXXXXXXXXX 170 L ++ + P+ ++ L L+Q D D + Sbjct: 488 HLTRSLTGMKPKHIPPV-MDALVNLIQKD---DFPLVELVLSENKLKHDLHDFINALGSN 543 Query: 171 XXXXVFIAGRNRLENDGATALAKVFQEMGSLEEIAMPQNGIYHVGITALSEAFKHNPAL 229 N + + GA LAK Q L I M +NG+ G + A +HN ++ Sbjct: 544 QSLQKLDISGNFMGDVGARLLAKALQINNRLRTIYMDKNGVTLQGYADIVYALEHNHSM 602 Score = 29.9 bits (64), Expect = 9.4 Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 9/101 (8%) Query: 41 IVDAINKCPNLQYLALTGNTLGVTAAHA--ISKALESHPELKIARFSDMFTG--RMKTEI 96 ++ AI+K P+++ L LT + G+ H + AL + + ++ ++K ++ Sbjct: 474 VLTAISKNPSIRTLHLTRSLTGMKPKHIPPVMDALVNLIQKDDFPLVELVLSENKLKHDL 533 Query: 97 PPALSALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKLLQ 137 ++ALG L LD+S N G +G LAK LQ Sbjct: 534 HDFINALGSNQ-----SLQKLDISGNFMGDVGARLLAKALQ 569 >AY058675-1|AAL13904.1| 772|Drosophila melanogaster LD38495p protein. Length = 772 Score = 30.7 bits (66), Expect = 5.4 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%) Query: 30 LKLDTAKDA--QQIVDAINKCPNLQYLALTG 58 L+L T D Q +V+A+ KC NLQ+L +TG Sbjct: 505 LQLQTCVDITNQALVEALTKCSNLQHLDVTG 535 >AE014297-2112|AAF55252.2| 772|Drosophila melanogaster CG4221-PA protein. Length = 772 Score = 30.7 bits (66), Expect = 5.4 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%) Query: 30 LKLDTAKDA--QQIVDAINKCPNLQYLALTG 58 L+L T D Q +V+A+ KC NLQ+L +TG Sbjct: 505 LQLQTCVDITNQALVEALTKCSNLQHLDVTG 535 >BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p protein. Length = 1238 Score = 30.3 bits (65), Expect = 7.1 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Query: 177 IAGRNRLENDGATALAKVFQEMGSLEEIAMPQNGIYHVGITALSEAFKHNPALNHLNLND 236 + G + +N A +++ + SL + + +NG+ I +F+HNP L LN++ Sbjct: 432 LKGLDLAQNQFARVDSQLLAGLPSLRRLDLSENGL----IELAPNSFRHNPLLETLNISS 487 Query: 237 N 237 N Sbjct: 488 N 488 >AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA protein. Length = 1535 Score = 30.3 bits (65), Expect = 7.1 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Query: 177 IAGRNRLENDGATALAKVFQEMGSLEEIAMPQNGIYHVGITALSEAFKHNPALNHLNLND 236 + G + +N A +++ + SL + + +NG+ I +F+HNP L LN++ Sbjct: 432 LKGLDLAQNQFARVDSQLLAGLPSLRRLDLSENGL----IELAPNSFRHNPLLETLNISS 487 Query: 237 N 237 N Sbjct: 488 N 488 Database: fruitfly Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 24,830,863 Number of sequences in database: 52,641 Lambda K H 0.317 0.134 0.384 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,504,410 Number of Sequences: 52641 Number of extensions: 702669 Number of successful extensions: 1902 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 1884 Number of HSP's gapped (non-prelim): 24 length of query: 542 length of database: 24,830,863 effective HSP length: 88 effective length of query: 454 effective length of database: 20,198,455 effective search space: 9170098570 effective search space used: 9170098570 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 64 (29.9 bits)
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