Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001697-TA|BGIBMGA001697-PA|undefined
(118 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g28690.1 68417.m04099 expressed protein 30 0.47
At2g40450.1 68415.m04992 speckle-type POZ protein-related contai... 29 0.82
At2g24200.1 68415.m02891 cytosol aminopeptidase identical to cyt... 28 1.4
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 27 2.5
At1g09060.2 68414.m01011 transcription factor jumonji (jmjC) dom... 27 2.5
At1g09060.1 68414.m01010 transcription factor jumonji (jmjC) dom... 27 2.5
At1g01860.1 68414.m00104 dimethyladenosine transferase (PFC1) id... 27 2.5
At5g51650.1 68418.m06404 hypothetical protein 27 3.3
At5g48510.1 68418.m05998 speckle-type POZ protein-related contai... 27 3.3
At3g47910.1 68416.m05224 expressed protein low similarity to non... 27 3.3
At4g26090.1 68417.m03756 disease resistance protein RPS2 (CC-NBS... 27 4.4
At1g77122.1 68414.m08984 expressed protein 27 4.4
At1g34210.1 68414.m04245 somatic embryogenesis receptor-like kin... 26 5.8
At3g28030.1 68416.m03499 UV hypersensitive protein (UVH3) / DNA-... 26 7.6
>At4g28690.1 68417.m04099 expressed protein
Length = 448
Score = 29.9 bits (64), Expect = 0.47
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 25 EEQTPLRRVELLTPVIAEEDYRELEVLVNFDSSVDDQFLEKTIKTLKTHDGIKEVGFK 82
+E+ P++ LL P + ED + V+++FD + E I+T +T DG+ VG K
Sbjct: 35 DEKKPIKGTVLLNPTVENEDDDDDCVILDFDPTAK----ETVIETCET-DGVLVVGQK 87
>At2g40450.1 68415.m04992 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain
Length = 209
Score = 29.1 bits (62), Expect = 0.82
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 16 SEVYKLIHDEEQTPLRRVELLTPVIAEEDYRELEVLVNFDSSVDDQFLEKTIK 68
SEV+K I + ++ ++ T ++E + ELE V F VD ++K
Sbjct: 50 SEVFKKILESDEFKASSKQMETVTLSEMKHEELEAFVEFIYRVDGSICSASLK 102
>At2g24200.1 68415.m02891 cytosol aminopeptidase identical to
cytosol aminopeptidase SP:P30184 from [Arabidopsis
thaliana]; contains Pfam profiles: PF00883 cytosol
aminopeptidase family catalytic domain, PF02789: cytosol
aminopeptidase family N-terminal domain
Length = 520
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 56 SSVDDQFLEKTIKTLKTHDGIKEVGFKDGAFVVETVLPSANVLDVVGSVTG 106
SSV D+ ++ L + GI F+DG + E+ PS +D++G TG
Sbjct: 137 SSVSDESKLSSVSALAS--GIVLGLFEDGRYKSESKKPSLKAVDIIGFGTG 185
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 27.5 bits (58), Expect = 2.5
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 22 IHDEEQTPLRRVELLTPVIAEEDYRELEVLVNFDSSVDDQFLEKTIKTLKTHDGIKEVGF 81
I+D E T +R L ++ + + V+ + D S+D K K L T E G
Sbjct: 264 IYDLELTAIRNNSELRKLLTATSSKSIIVIEDIDCSLDLTGKRKKEKNLMTSREDGEQGT 323
Query: 82 -KDGAFVVETVLPSANVLDVVGSVTGRPAVI 111
+D +FV T+ N +D + S G+ +I
Sbjct: 324 EEDKSFV--TLSGLLNFIDGIWSACGQERII 352
>At1g09060.2 68414.m01011 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 930
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 18 VYKLIHDEEQTPLRRVELLTPVIAEEDYRELE 49
VY L+H E+T RV PV E D + E
Sbjct: 658 VYLLVHTSEETTFERVRKTKPVPEEPDQKMSE 689
>At1g09060.1 68414.m01010 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 930
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 18 VYKLIHDEEQTPLRRVELLTPVIAEEDYRELE 49
VY L+H E+T RV PV E D + E
Sbjct: 658 VYLLVHTSEETTFERVRKTKPVPEEPDQKMSE 689
>At1g01860.1 68414.m00104 dimethyladenosine transferase (PFC1)
identical to dimethyladenosine transferase GB:AAC09322
GI:3005590 from [Arabidopsis thaliana]
Length = 343
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 16 SEVYKLIHDEEQTPLRRVELLTPVIAEEDYRELEVLVNFDSSVDDQF 62
S+V L+ DE LR VE P + +YR + +L+NF S + F
Sbjct: 204 SKVVLLLQDE--AALRLVE---PALRTSEYRPINILINFYSEPEYNF 245
>At5g51650.1 68418.m06404 hypothetical protein
Length = 206
Score = 27.1 bits (57), Expect = 3.3
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 13 LQHSEVYKLIHDEEQTPLRRVELLTPVIAE--EDYRELEVLVNFDSSVDDQFLEKTIKTL 70
L+ + K +EE +++L T + + D ++L+ L+ +D+F+EK +K
Sbjct: 126 LKEKKKDKKKEEEEDDFGSKIKLTTADLRKLANDKQQLKKLLREFEKKNDEFIEKLMKEK 185
Query: 71 KTHDGIKEVGFKDGAFVV 88
K ++ G K F+V
Sbjct: 186 KLEKNKRKKGKKGKTFIV 203
>At5g48510.1 68418.m05998 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 224
Score = 27.1 bits (57), Expect = 3.3
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 16 SEVYKLIH--DEEQTPLRRVELLTPVIAEEDYRELEVLVNFDSSVDDQFLEKTIK 68
SEV+K + DE +T + VE +T ++E + ELE V F S D L +K
Sbjct: 50 SEVFKNMFELDEFKTSTKHVETIT--LSEMKHEELEAFVEFICS-DGSMLSANVK 101
>At3g47910.1 68416.m05224 expressed protein low similarity to
nonmuscle myosin heavy chain (NMHC) [Homo sapiens]
GI:189036; contains Pfam profiles PF04780: Protein of
unknown function (DUF629), PF04781: Protein of unknown
function (DUF627)
Length = 1290
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 16 SEVYKLIHDEEQTPLRRVELLTPVIAEEDYRELEVLVNFDSSVDDQFLEK 65
SE + + +EE+ R++EL EE+ R+LE + + ++D+ EK
Sbjct: 1004 SEAVEALKEEEEEYKRQIEL------EEEERKLEKTLEYQRRIEDEAKEK 1047
>At4g26090.1 68417.m03756 disease resistance protein RPS2
(CC-NBS-LRR class), putative domain signature CC-NBS-LRR
exists, suggestive of a disease resistance protein.
identical to RPS2 (gi:13661831)
Length = 909
Score = 26.6 bits (56), Expect = 4.4
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 8 VSLDHLQHSEVYKLIHDEEQTPLRRVELLTP--VIAEEDYRELEVLVNFDSS--VDDQFL 63
VS D L++ + H + + V+ L VI D RE+E L++ S V+D L
Sbjct: 766 VSQDCLRNIRCINISHCNKLKNVSWVQKLPKLEVIELFDCREIEELISEHESPSVEDPTL 825
Query: 64 EKTIKTLKTHD 74
++KTL+T D
Sbjct: 826 FPSLKTLRTRD 836
>At1g77122.1 68414.m08984 expressed protein
Length = 323
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 16 SEVYKLIHDEEQTPLRRVELLTPVIAEEDYRELEVLVNFDSSVDDQF-LEKTIKTLKTHD 74
++V +LI +EE+ E++ P +E+ EL + +D DD F +++ + L D
Sbjct: 74 NKVEELIIEEEEEEEEEEEIVLPEEIQENQDELLLDDEYDEDDDDDFEFDESEEELYAGD 133
Query: 75 G 75
G
Sbjct: 134 G 134
>At1g34210.1 68414.m04245 somatic embryogenesis receptor-like kinase
2 (SERK2) nearly identical to somatic embryogenesis
receptor-like kinase 2 [Arabidopsis thaliana]
GI:14573457; contains Pfam domains PF00560: Leucine Rich
Repeat and PF00069: Protein kinase domain; identical to
cDNA somatic embryogenesis receptor-like kinase 2
(SERK2) GI:14573456
Length = 628
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 83 DGAFVVETVLPSANVLDVVGSVTGRP 108
+G+F + T + AN LD+ G VT RP
Sbjct: 187 NGSFSLFTPISFANNLDLCGPVTSRP 212
>At3g28030.1 68416.m03499 UV hypersensitive protein (UVH3) /
DNA-repair protein, putative identical to UV
hypersensitive protein [Arabidopsis thaliana]
gi|13649704|gb|AAK37472; similar to Swiss-Prot:P14629
DNA-repair protein complementing XP-G cells homolog
(Xeroderma pigmentosum group G complementing protein
homolog) [Xenopus laevis]
Length = 1479
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 34 ELLTPVIAEEDYRELEVLVNFDSSVDDQFLEKTIKTLKTHDGIKEVG 80
ELL PV+ E + RE ++ + S +++F + I++ + + +K +G
Sbjct: 1164 ELLLPVLKEYEKRETQLRIEAFYSFNERFAK--IRSKRINKAVKGIG 1208
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.137 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,985,183
Number of Sequences: 28952
Number of extensions: 118535
Number of successful extensions: 232
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 224
Number of HSP's gapped (non-prelim): 14
length of query: 118
length of database: 12,070,560
effective HSP length: 72
effective length of query: 46
effective length of database: 9,986,016
effective search space: 459356736
effective search space used: 459356736
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 54 (25.8 bits)
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