GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001697-TA|BGIBMGA001697-PA|undefined
         (118 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    25   0.15 
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    24   0.34 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.0  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   1.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   1.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   1.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   1.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   1.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   1.8  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   4.2  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 25.4 bits (53), Expect = 0.15
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 45  YRELEVLVNFDSSVDDQFLEKTIKTLKTHDGIKEVGFKDGAFV 87
           Y+ L  L  F  + ++Q L K +       G ++V FK G F+
Sbjct: 325 YKLLSNLGIFPKTTNEQLLRKELLLFAEQMGQRQVAFKVGGFL 367


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 24.2 bits (50), Expect = 0.34
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 39  VIAEEDYRELEVLVNFDSSVDDQFLEKTIKTLK 71
           ++A+ D+ E      F+   +DQFL KT+K +K
Sbjct: 114 LLADYDFSETLTRAKFEELNNDQFL-KTLKPVK 145


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 3   YEKPPVSLDHLQHSEVYKLIHDEEQTPLRRVELLTPV 39
           Y    VS  H Q+ E   +++ E   P    E  TPV
Sbjct: 364 YYNQDVSCTHYQNPEYISVVNPESPYPQIGSERATPV 400


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)

Query: 12  HLQHSEVYKLIHD 24
           H++ S +Y L+HD
Sbjct: 104 HMEKSAIYNLLHD 116


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 24  DEEQTPLRRVELLTPVIAEEDYRELEVLVNFDSSVD 59
           DE+Q+  RRV      + + DY E E  + FD + +
Sbjct: 588 DEDQSA-RRVAQKYLRVVDPDYYEFETHIFFDDAFE 622


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 24  DEEQTPLRRVELLTPVIAEEDYRELEVLVNFDSSVD 59
           DE+Q+  RRV      + + DY E E  + FD + +
Sbjct: 588 DEDQSA-RRVAQKYLRVVDPDYYEFETHIFFDDAFE 622


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 24  DEEQTPLRRVELLTPVIAEEDYRELEVLVNFDSSVD 59
           DE+Q+  RRV      + + DY E E  + FD + +
Sbjct: 588 DEDQSA-RRVAQKYLRVVDPDYYEFETHIFFDDAFE 622


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 24  DEEQTPLRRVELLTPVIAEEDYRELEVLVNFDSSVD 59
           DE+Q+  RRV      + + DY E E  + FD + +
Sbjct: 588 DEDQSA-RRVAQKYLRVVDPDYYEFETHIFFDDAFE 622


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)

Query: 12  HLQHSEVYKLIHD 24
           H++ S +Y L+HD
Sbjct: 104 HMEKSAIYNLLHD 116


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 7/24 (29%), Positives = 13/24 (54%)

Query: 5   KPPVSLDHLQHSEVYKLIHDEEQT 28
           K P S + +QH  V   + + ++T
Sbjct: 86  KAPQSFEDIQHQRVMANVRERQRT 109


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.137    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,388
Number of Sequences: 317
Number of extensions: 1067
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 118
length of database: 114,650
effective HSP length: 50
effective length of query: 68
effective length of database: 98,800
effective search space:  6718400
effective search space used:  6718400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.1 bits)
S2: 38 (19.4 bits)