Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001697-TA|BGIBMGA001697-PA|undefined
(118 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026) 28 1.7
SB_32678| Best HMM Match : HEAT (HMM E-Value=9.6e-18) 28 2.3
SB_32414| Best HMM Match : Osteopontin (HMM E-Value=2.4) 27 3.0
SB_52450| Best HMM Match : DUF1222 (HMM E-Value=0) 27 4.0
SB_41816| Best HMM Match : Peptidase_M10 (HMM E-Value=0) 27 4.0
SB_15917| Best HMM Match : Arm (HMM E-Value=0.47) 27 4.0
SB_45045| Best HMM Match : Kinesin (HMM E-Value=0) 27 5.3
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_17201| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_6257| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_50467| Best HMM Match : SH3_1 (HMM E-Value=1e-12) 26 7.0
SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.3
SB_21992| Best HMM Match : LRR_1 (HMM E-Value=3.2e-07) 26 9.3
>SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026)
Length = 521
Score = 28.3 bits (60), Expect = 1.7
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 28 TPLRRVELLTPVIAEEDYRELEVLVNFDSSVDDQFLEKTIKTLKTHDGIKEVGFK----- 82
TP + EL + +ED + + ++++DD+ +EK LKT IK +
Sbjct: 155 TPEQVDELAAAITTKEDVTSITLR---NATIDDEAIEKLAAALKTTQSIKMLNLNVNKVG 211
Query: 83 -DGAFVVETVLPSANVLDVVGSVTGRPAVIQG 113
+GA V V+ SA L ++ + G P +G
Sbjct: 212 PEGAKHVAEVIKSAKSLRML-LLHGNPLTNEG 242
>SB_32678| Best HMM Match : HEAT (HMM E-Value=9.6e-18)
Length = 844
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 34 ELLTPVIAEEDYRELEVLVNFDSSVDDQFLEKTIKTLKTHDGIKEV 79
ELL+P+I E Y +V+ F+ + ++ ++ +K +T D I V
Sbjct: 39 ELLSPIIRMEKYMHSDVI--FNRQMAARYTKEALKACRTKDDIYHV 82
>SB_32414| Best HMM Match : Osteopontin (HMM E-Value=2.4)
Length = 777
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/64 (23%), Positives = 30/64 (46%)
Query: 25 EEQTPLRRVELLTPVIAEEDYRELEVLVNFDSSVDDQFLEKTIKTLKTHDGIKEVGFKDG 84
EE T +E + +E+D ++E ++ DD+ +++ + G+K+ F D
Sbjct: 447 EEDTKSESIEAESEKTSEKDEEDIESTISEKKDSDDEEEQESADDGYSESGLKDESFLDR 506
Query: 85 AFVV 88
A V
Sbjct: 507 ASTV 510
>SB_52450| Best HMM Match : DUF1222 (HMM E-Value=0)
Length = 640
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 52 VNFDSSVDDQFLEKTIKTLKTHDG 75
V+F S+D QF++KTIK H G
Sbjct: 251 VHFRFSIDVQFVDKTIKHKLDHSG 274
>SB_41816| Best HMM Match : Peptidase_M10 (HMM E-Value=0)
Length = 556
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 61 QFLEKTIKTLKTHDGIKEVGFKDGAFVVETVLPSANVLDVVGS 103
Q L + I+ + + G++E G D A + P + D+VG+
Sbjct: 29 QDLSRAIRQFQRYTGLQETGIMDAATKSKMEQPRCGLPDIVGT 71
>SB_15917| Best HMM Match : Arm (HMM E-Value=0.47)
Length = 276
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 8 VSLDHLQHSEVYKLIHDEEQTPLRRVELLTPVIAEEDY 45
+ D + + V+KL +++ +P RV+LLT EED+
Sbjct: 151 IDTDCVSYFTVFKL-YEKVDSPTERVKLLTVYSGEEDF 187
>SB_45045| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1260
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 67 IKTLKTHDGIKEVGFKDGAFVVETVLPSANVLDVVGSVTGRPAVIQGFGG 116
++ + + I V ++ FV + VLP A V S GRP V F G
Sbjct: 39 VEVIPIRNEIVLVDGRERRFVFDAVLPPAATNRQVYSYAGRPLVDAAFSG 88
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 26.6 bits (56), Expect = 5.3
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 4 EKPPVSLDHLQHSEVYKLIHDEEQTPLRRVELLTPVIAEEDYRELEVLVNFDSSVDDQFL 63
EK S+ H++ E + EE LR++E + + ++LE LV +S+ DQ +
Sbjct: 1404 EKLQESVSHVEQLEGALEVIKEENDQLRKMEADGQELQADFEKQLESLV--EST--DQLM 1459
Query: 64 EKTIKTLKTHDG 75
++ ++ ++T +G
Sbjct: 1460 QEKVEVIQTLEG 1471
>SB_17201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 23 HDEEQTPLRRVELLTPVIAEEDYRELE 49
+ EE+T RRV++L + EE REL+
Sbjct: 59 YKEEETKPRRVDMLLKELMEERKRELD 85
>SB_6257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 26.2 bits (55), Expect = 7.0
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 52 VNFDSSVDDQFLEKTIKTLKTHDGIKEVGFKDGAFVVETVLPSANVLDVVGSVTG 106
V+F S +D F++KTIK + H E D + ++ VLD++G + G
Sbjct: 457 VHFRSPMDVLFVDKTIKHKQDH---SENAQADHFWKLDYYRADKRVLDLIGDLHG 508
>SB_50467| Best HMM Match : SH3_1 (HMM E-Value=1e-12)
Length = 132
Score = 26.2 bits (55), Expect = 7.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 23 HDEEQTPLRRVELLTPVIAEED 44
HD+E P ++ ++LT + EED
Sbjct: 48 HDDEDLPFKKGDILTVISKEED 69
>SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 85 AFVVETVLPSA--NVLDVVGSVTGRPAVIQGFGG 116
+ + VLPSA V GS+ GRP+ I+G G
Sbjct: 91 SMITPGVLPSAPGGVASYTGSMGGRPSSIRGIRG 124
>SB_21992| Best HMM Match : LRR_1 (HMM E-Value=3.2e-07)
Length = 534
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 39 VIAEEDYRELEVLVNFDSSVDDQFLEKTIKTLKTHDGIKEVGFKDGAFVVE 89
++AEE YR+ E+ D + + EK + + + D ++ F+ FV E
Sbjct: 206 LLAEEQYRKEEMASTTDEDLLRIWDEKPVTSTRPIDENIDIAFRSADFVSE 256
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.137 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,055,013
Number of Sequences: 59808
Number of extensions: 154368
Number of successful extensions: 335
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 328
Number of HSP's gapped (non-prelim): 13
length of query: 118
length of database: 16,821,457
effective HSP length: 73
effective length of query: 45
effective length of database: 12,455,473
effective search space: 560496285
effective search space used: 560496285
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 54 (25.8 bits)
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