Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001696-TA|BGIBMGA001696-PA|IPR001478|PDZ/DHR/GLGF
         (2075 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    26   2.3  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    25   7.2  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 2.3
 Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 13/135 (9%)

Query: 468 LLLKTFFIHLTDVMVALSRFILTQPALSKTEERQCA--YRDSINE-TYREDLVSKSKVE- 523
           +++  FF HL+DV   +  ++L    L   E    A    D   E    + L+ K K++ 
Sbjct: 272 IVMYVFFFHLSDVRYVMVVYLLKNVVLYGLELFILAKIVTDLCQEANSTKKLIVKIKIDI 331

Query: 524 DNRRRENKMV------SQNESKIQEFESKEVKEFDKFEMKESRKSGAKM---AQMSDRRN 574
           D     N+++      SQNE +I   +   +     F    ++K   K+       D RN
Sbjct: 332 DKEDERNEVISSALKLSQNELEITACKFFSIDNALLFSANSTKKLIVKIRIDIDKEDERN 391

Query: 575 EELTKKMETVITELE 589
           E ++  ++   +ELE
Sbjct: 392 EIISSALKLSQSELE 406


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 7.2
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 621 PLEWLDKVDSRRASLEKEVTSKQFSSEFKSNAHQ 654
           P +WL K   RR       T     SEF +N H+
Sbjct: 323 PFKWLFKKKKRRNRESTTNTQSSSLSEFLTNTHK 356


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.308    0.126    0.333 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,646
Number of Sequences: 317
Number of extensions: 13050
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 2
length of query: 2075
length of database: 114,650
effective HSP length: 68
effective length of query: 2007
effective length of database: 93,094
effective search space: 186839658
effective search space used: 186839658
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 50 (24.2 bits)